RNA–Protein interactions for RNA: ENST00000321253.6

TUBA3D-201, Transcript of tubulin alpha 3d, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3D, Length 1,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-201ENST00000321253 ERCC6L2Q5T890 1561 aa24.72■■□□□ 1.55
TUBA3D-201ENST00000321253 KIAA0586Q9BVV6 1533 aa24.71■■□□□ 1.55
TUBA3D-201ENST00000321253 PRG4Q92954 1404 aaPredicted RBP24.69■■□□□ 1.54
TUBA3D-201ENST00000321253 RAPGEF2Q9Y4G8 1499 aa24.69■■□□□ 1.54
TUBA3D-201ENST00000321253 IQGAP2Q13576 1575 aa24.58■■□□□ 1.52
TUBA3D-201ENST00000321253 CHIC1Q5VXU3 224 aa24.56■■□□□ 1.52
TUBA3D-201ENST00000321253 PRXQ9BXM0 1461 aa24.56■■□□□ 1.52
TUBA3D-201ENST00000321253 EEA1Q15075 1411 aa24.55■■□□□ 1.52
TUBA3D-201ENST00000321253 CSRNP3Q8WYN3 585 aa24.53■■□□□ 1.52
TUBA3D-201ENST00000321253 CARMIL2Q6F5E8 1435 aa24.49■■□□□ 1.51
TUBA3D-201ENST00000321253 CTTNBP2Q8WZ74 1663 aa24.46■■□□□ 1.51
TUBA3D-201ENST00000321253 FAM9AQ8IZU1 332 aaPredicted RBP24.45■■□□□ 1.5
TUBA3D-201ENST00000321253 TRHP20396 242 aaPredicted RBP24.44■■□□□ 1.5
TUBA3D-201ENST00000321253 UGGT2Q9NYU1 1516 aa24.42■■□□□ 1.5
TUBA3D-201ENST00000321253 TNIKQ9UKE5 1360 aa24.4■■□□□ 1.5
TUBA3D-201ENST00000321253 PTPRGP23470 1445 aa24.39■■□□□ 1.5
TUBA3D-201ENST00000321253 DISP1Q96F81 1524 aa24.37■■□□□ 1.49
TUBA3D-201ENST00000321253 TTBK1Q5TCY1 1321 aaPredicted RBP24.37■■□□□ 1.49
TUBA3D-201ENST00000321253 KIAA0556O60303 1618 aa24.33■■□□□ 1.49
TUBA3D-201ENST00000321253 NPM1P06748 294 aaKnown RBP eCLIP24.32■■□□□ 1.48
TUBA3D-201ENST00000321253 ADCY10Q96PN6 1610 aa24.32■■□□□ 1.48
TUBA3D-201ENST00000321253 GOLGA3Q08378 1498 aa24.31■■□□□ 1.48
TUBA3D-201ENST00000321253 KIF21BO75037 1637 aa24.29■■□□□ 1.48
TUBA3D-201ENST00000321253 UACAQ9BZF9 1416 aa24.21■■□□□ 1.47
TUBA3D-201ENST00000321253 MAPKBP1O60336 1514 aa24.19■■□□□ 1.46
TUBA3D-201ENST00000321253 UHRF1BP1LA0JNW5 1464 aa24.19■■□□□ 1.46
TUBA3D-201ENST00000321253 ABCC2Q92887 1545 aa24.18■■□□□ 1.46
TUBA3D-201ENST00000321253 EHMT2Q96KQ7 1210 aa24.15■■□□□ 1.46
TUBA3D-201ENST00000321253 UBTFP17480 764 aaKnown RBP24.13■■□□□ 1.45
TUBA3D-201ENST00000321253 RANGAP1P46060 587 aaPredicted RBP24.13■■□□□ 1.45
TUBA3D-201ENST00000321253 P3H3Q8IVL6 736 aa24.13■■□□□ 1.45
TUBA3D-201ENST00000321253 SAMD9Q5K651 1589 aa24.12■■□□□ 1.45
TUBA3D-201ENST00000321253 PLB1Q6P1J6 1458 aa24.1■■□□□ 1.45
TUBA3D-201ENST00000321253 ABCC10Q5T3U5 1492 aa24.09■■□□□ 1.45
TUBA3D-201ENST00000321253 KIF13AQ9H1H9 1805 aa24.08■■□□□ 1.45
TUBA3D-201ENST00000321253 KDM5BQ9UGL1 1544 aa24.07■■□□□ 1.44
TUBA3D-201ENST00000321253 FAM69CQ0P6D2 419 aa24.06■■□□□ 1.44
TUBA3D-201ENST00000321253 ABCA8O94911 1581 aa24.06■■□□□ 1.44
TUBA3D-201ENST00000321253 DIP2BQ9P265 1576 aa24.05■■□□□ 1.44
TUBA3D-201ENST00000321253 ASXL2Q76L83 1435 aa24.04■■□□□ 1.44
TUBA3D-201ENST00000321253 EFCAB5A4FU69 1503 aa24.03■■□□□ 1.44
TUBA3D-201ENST00000321253 ZCCHC11Q5TAX3 1644 aaKnown RBP24.03■■□□□ 1.44
TUBA3D-201ENST00000321253 FHOD3Q2V2M9 1422 aa24■■□□□ 1.43
TUBA3D-201ENST00000321253 RAPGEF6Q8TEU7 1601 aa23.94■■□□□ 1.42
TUBA3D-201ENST00000321253 ARID3CA6NKF2 412 aa23.9■■□□□ 1.42
TUBA3D-201ENST00000321253 WDR7Q9Y4E6 1490 aa23.9■■□□□ 1.42
TUBA3D-201ENST00000321253 GLI2P10070 1586 aa23.89■■□□□ 1.42
TUBA3D-201ENST00000321253 EPRSP07814 1512 aaKnown RBP23.89■■□□□ 1.41
TUBA3D-201ENST00000321253 ATP10BO94823 1461 aa23.86■■□□□ 1.41
TUBA3D-201ENST00000321253 ARHGAP35Q9NRY4 1499 aa23.86■■□□□ 1.41
TUBA3D-201ENST00000321253 TSPOAP1O95153 1857 aa23.86■■□□□ 1.41
TUBA3D-201ENST00000321253 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.83■■□□□ 1.41
TUBA3D-201ENST00000321253 HNRNPUL2Q1KMD3 747 aaKnown RBP23.83■■□□□ 1.41
TUBA3D-201ENST00000321253 NUP153P49790 1475 aaKnown RBP23.83■■□□□ 1.4
TUBA3D-201ENST00000321253 FMN1Q68DA7 1419 aa23.82■■□□□ 1.4
TUBA3D-201ENST00000321253 KCNH8Q96L42 1107 aa23.8■■□□□ 1.4
TUBA3D-201ENST00000321253 MAP3K4Q9Y6R4 1608 aa23.78■■□□□ 1.4
TUBA3D-201ENST00000321253 PPRC1Q5VV67 1664 aaKnown RBP23.73■■□□□ 1.39
TUBA3D-201ENST00000321253 ATP1B4Q9UN42 357 aaPredicted RBP23.73■■□□□ 1.39
TUBA3D-201ENST00000321253 TEX14Q8IWB6 1497 aa23.72■■□□□ 1.39
TUBA3D-201ENST00000321253 KDM6BO15054 1643 aa23.71■■□□□ 1.39
TUBA3D-201ENST00000321253 HECW1Q76N89 1606 aa23.71■■□□□ 1.39
TUBA3D-201ENST00000321253 CLIP1P30622 1438 aa23.71■■□□□ 1.39
TUBA3D-201ENST00000321253 CFAP43Q8NDM7 1665 aa23.71■■□□□ 1.39
TUBA3D-201ENST00000321253 CD109Q6YHK3 1445 aa23.7■■□□□ 1.38
TUBA3D-201ENST00000321253 PLEKHD1A6NEE1 506 aa23.69■■□□□ 1.38
TUBA3D-201ENST00000321253 CDK13Q14004 1512 aaKnown RBP23.66■■□□□ 1.38
TUBA3D-201ENST00000321253 MAGI3Q5TCQ9 1506 aa23.64■■□□□ 1.37
TUBA3D-201ENST00000321253 ABCA9Q8IUA7 1624 aa23.63■■□□□ 1.37
TUBA3D-201ENST00000321253 PCF11O94913 1555 aaKnown RBP23.59■■□□□ 1.37
TUBA3D-201ENST00000321253 CASKIN1Q8WXD9 1431 aa23.59■■□□□ 1.37
TUBA3D-201ENST00000321253 CDK11AQ9UQ88 783 aaPredicted RBP23.59■■□□□ 1.37
TUBA3D-201ENST00000321253 CEP162Q5TB80 1403 aa23.58■■□□□ 1.37
TUBA3D-201ENST00000321253 LOC105371045A0A1W2PR82 267 aa23.57■■□□□ 1.36
TUBA3D-201ENST00000321253 FYCO1Q9BQS8 1478 aa23.55■■□□□ 1.36
TUBA3D-201ENST00000321253 CCDC18Q5T9S5 1454 aa23.54■■□□□ 1.36
TUBA3D-201ENST00000321253 LRRIQ1Q96JM4 1722 aa23.53■■□□□ 1.36
TUBA3D-201ENST00000321253 COL17A1Q9UMD9 1497 aaPredicted RBP23.52■■□□□ 1.36
TUBA3D-201ENST00000321253 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.51■■□□□ 1.35
TUBA3D-201ENST00000321253 TTC37Q6PGP7 1564 aa23.48■■□□□ 1.35
TUBA3D-201ENST00000321253 PHLDB1Q86UU1 1377 aa23.47■■□□□ 1.35
TUBA3D-201ENST00000321253 TROQ12816 1431 aaPredicted RBP23.47■■□□□ 1.35
TUBA3D-201ENST00000321253 NEO1Q92859 1461 aa23.46■■□□□ 1.35
TUBA3D-201ENST00000321253 KIF14Q15058 1648 aa23.45■■□□□ 1.34
TUBA3D-201ENST00000321253 ARAP3Q8WWN8 1544 aa23.44■■□□□ 1.34
TUBA3D-201ENST00000321253 CFAP74Q9C0B2 1584 aa23.41■■□□□ 1.34
TUBA3D-201ENST00000321253 FANCAO15360 1455 aa23.41■■□□□ 1.34
TUBA3D-201ENST00000321253 PLCH2O75038 1416 aa23.38■■□□□ 1.33
TUBA3D-201ENST00000321253 MYO5CQ9NQX4 1742 aa23.37■■□□□ 1.33
TUBA3D-201ENST00000321253 AKNAQ7Z591 1439 aa23.35■■□□□ 1.33
TUBA3D-201ENST00000321253 RAPGEF3O95398 923 aa23.32■■□□□ 1.32
TUBA3D-201ENST00000321253 EFCAB2Q5VUJ9 269 aa23.31■■□□□ 1.32
TUBA3D-201ENST00000321253 DENND4BO75064 1496 aaPredicted RBP23.31■■□□□ 1.32
TUBA3D-201ENST00000321253 VPS8Q8N3P4 1428 aa23.3■■□□□ 1.32
TUBA3D-201ENST00000321253 MTUS2Q5JR59 1369 aa23.3■■□□□ 1.32
TUBA3D-201ENST00000321253 AEBP2Q6ZN18 517 aaPredicted RBP23.29■■□□□ 1.32
TUBA3D-201ENST00000321253 ARHGAP5Q13017 1502 aa23.29■■□□□ 1.32
TUBA3D-201ENST00000321253 ADGRL1O94910 1474 aa23.28■■□□□ 1.32
TUBA3D-201ENST00000321253 FRMPD1Q5SYB0 1578 aa23.26■■□□□ 1.31
TUBA3D-201ENST00000321253 PREX2Q70Z35 1606 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms