RNA–Protein interactions for RNA: ENST00000321027.7

GCFC2-201, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCFC2, Length 4,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-201ENST00000321027 VPS8Q8N3P4 1428 aa21.02■□□□□ 0.96
GCFC2-201ENST00000321027 RUSC2Q8N2Y8 1516 aa21.02■□□□□ 0.96
GCFC2-201ENST00000321027 MRS2Q9HD23 443 aa21.01■□□□□ 0.95
GCFC2-201ENST00000321027 SALL2Q9Y467 1007 aaPredicted RBP21.01■□□□□ 0.95
GCFC2-201ENST00000321027 SUPT16HQ9Y5B9 1047 aaKnown RBP21.01■□□□□ 0.95
GCFC2-201ENST00000321027 TSPY4P0CV99 314 aa20.98■□□□□ 0.95
GCFC2-201ENST00000321027 TSPY10P0CW01 314 aa20.98■□□□□ 0.95
GCFC2-201ENST00000321027 CADPSQ9ULU8 1353 aa20.98■□□□□ 0.95
GCFC2-201ENST00000321027 NPM2Q86SE8 214 aaKnown RBP20.98■□□□□ 0.95
GCFC2-201ENST00000321027 CCNB3Q8WWL7 1395 aa20.95■□□□□ 0.94
GCFC2-201ENST00000321027 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.94■□□□□ 0.946e-7■■□□□ 13.5
GCFC2-201ENST00000321027 TDRD9Q8NDG6 1382 aaKnown RBP20.94■□□□□ 0.94
GCFC2-201ENST00000321027 SENP3-EIF4A1A0A087X0R7 540 aa20.94■□□□□ 0.94
GCFC2-201ENST00000321027 ANP32AP39687 249 aaKnown RBP20.94■□□□□ 0.94
GCFC2-201ENST00000321027 CANXP27824 592 aaKnown RBP20.92■□□□□ 0.94
GCFC2-201ENST00000321027 EIF4G2P78344 907 aaKnown RBP eCLIP20.92■□□□□ 0.94
GCFC2-201ENST00000321027 ERCC6Q03468 1493 aa20.92■□□□□ 0.94
GCFC2-201ENST00000321027 PLEKHD1A6NEE1 506 aa20.91■□□□□ 0.94
GCFC2-201ENST00000321027 FHAD1B1AJZ9 1412 aa20.9■□□□□ 0.94
GCFC2-201ENST00000321027 RAPGEF2Q9Y4G8 1499 aa20.9■□□□□ 0.94
GCFC2-201ENST00000321027 NPM1P06748 294 aaKnown RBP eCLIP20.88■□□□□ 0.93
GCFC2-201ENST00000321027 TMC1Q8TDI8 760 aa20.88■□□□□ 0.93
GCFC2-201ENST00000321027 ZBTB47Q9UFB7 747 aaPredicted RBP20.87■□□□□ 0.93
GCFC2-201ENST00000321027 KCNH8Q96L42 1107 aa20.87■□□□□ 0.93
GCFC2-201ENST00000321027 CCDC136Q96JN2 1154 aa20.86■□□□□ 0.93
GCFC2-201ENST00000321027 KDM2AQ9Y2K7 1162 aa20.86■□□□□ 0.93
GCFC2-201ENST00000321027 PDS5BQ9NTI5 1447 aa20.85■□□□□ 0.93
GCFC2-201ENST00000321027 CFDP1Q9UEE9 299 aaPredicted RBP20.85■□□□□ 0.93
GCFC2-201ENST00000321027 EIF4G1Q04637 1599 aaKnown RBP20.82■□□□□ 0.92
GCFC2-201ENST00000321027 NBR1Q14596 966 aa20.8■□□□□ 0.92
GCFC2-201ENST00000321027 SLC24A1O60721 1099 aa20.8■□□□□ 0.92
GCFC2-201ENST00000321027 CHGAP10645 457 aaKnown RBP20.8■□□□□ 0.92
GCFC2-201ENST00000321027 ANP32EQ9BTT0 268 aa20.76■□□□□ 0.91
GCFC2-201ENST00000321027 RAB3GAP2Q9H2M9 1393 aa20.72■□□□□ 0.91
GCFC2-201ENST00000321027 NEFMP07197 916 aa20.7■□□□□ 0.9
GCFC2-201ENST00000321027 NCAPD3P42695 1498 aa20.69■□□□□ 0.9
GCFC2-201ENST00000321027 FANCD2Q9BXW9 1451 aa20.69■□□□□ 0.9
GCFC2-201ENST00000321027 SETD5Q9C0A6 1442 aa20.68■□□□□ 0.9
GCFC2-201ENST00000321027 FHOD3Q2V2M9 1422 aa20.66■□□□□ 0.9
GCFC2-201ENST00000321027 RGL3Q3MIN7 710 aa20.64■□□□□ 0.89
GCFC2-201ENST00000321027 DHX57Q6P158 1386 aaKnown RBP20.63■□□□□ 0.89
GCFC2-201ENST00000321027 ARHGAP35Q9NRY4 1499 aa20.62■□□□□ 0.89
GCFC2-201ENST00000321027 FMN1Q68DA7 1419 aa20.61■□□□□ 0.89
GCFC2-201ENST00000321027 TIMELESSQ9UNS1 1208 aa20.6■□□□□ 0.89
GCFC2-201ENST00000321027 B4GALNT3Q6L9W6 998 aa20.59■□□□□ 0.89
GCFC2-201ENST00000321027 IGF1RP08069 1367 aa20.59■□□□□ 0.89
GCFC2-201ENST00000321027 TSHZ2Q9NRE2 1034 aa20.58■□□□□ 0.88
GCFC2-201ENST00000321027 CCER2I3L3R5 266 aa20.57■□□□□ 0.88
GCFC2-201ENST00000321027 FOXD1Q16676 465 aa20.57■□□□□ 0.88
GCFC2-201ENST00000321027 STAG3Q9UJ98 1225 aa20.56■□□□□ 0.88
GCFC2-201ENST00000321027 RBM19Q9Y4C8 960 aaKnown RBP20.56■□□□□ 0.88
GCFC2-201ENST00000321027 EIF5BO60841 1220 aaKnown RBP20.56■□□□□ 0.88
GCFC2-201ENST00000321027 PPP1R15AO75807 674 aaPredicted RBP20.56■□□□□ 0.88
GCFC2-201ENST00000321027 ESF1Q9H501 851 aaKnown RBP20.56■□□□□ 0.88
GCFC2-201ENST00000321027 FGD5Q6ZNL6 1462 aa20.55■□□□□ 0.88
GCFC2-201ENST00000321027 HSPA5P11021 654 aaKnown RBP20.54■□□□□ 0.88
GCFC2-201ENST00000321027 PPP4R2Q9NY27 417 aa20.54■□□□□ 0.88
GCFC2-201ENST00000321027 CARD11Q9BXL7 1154 aa20.51■□□□□ 0.87
GCFC2-201ENST00000321027 RAD54L2Q9Y4B4 1467 aa20.5■□□□□ 0.87
GCFC2-201ENST00000321027 WDR43Q15061 677 aaKnown RBP eCLIP20.49■□□□□ 0.87
GCFC2-201ENST00000321027 SYNJ1O43426 1573 aa20.48■□□□□ 0.87
GCFC2-201ENST00000321027 HSP90AA1P07900 732 aaKnown RBP20.48■□□□□ 0.87
GCFC2-201ENST00000321027 PLPPR3Q6T4P5 718 aa20.47■□□□□ 0.87
GCFC2-201ENST00000321027 SENP3Q9H4L4 574 aaPredicted RBP20.46■□□□□ 0.87
GCFC2-201ENST00000321027 CARMIL2Q6F5E8 1435 aa20.45■□□□□ 0.86
GCFC2-201ENST00000321027 CFTRP13569 1480 aa20.44■□□□□ 0.86
GCFC2-201ENST00000321027 BICRAQ9NZM4 1560 aa20.43■□□□□ 0.86
GCFC2-201ENST00000321027 UPF2Q9HAU5 1272 aaKnown RBP20.42■□□□□ 0.86
GCFC2-201ENST00000321027 JPH4Q96JJ6 628 aa20.41■□□□□ 0.86
GCFC2-201ENST00000321027 ARXQ96QS3 562 aa20.39■□□□□ 0.85
GCFC2-201ENST00000321027 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.38■□□□□ 0.85
GCFC2-201ENST00000321027 KIF21BO75037 1637 aa20.36■□□□□ 0.85
GCFC2-201ENST00000321027 MPHOSPH9Q99550 1183 aa20.36■□□□□ 0.85
GCFC2-201ENST00000321027 GAPVD1Q14C86 1478 aa20.36■□□□□ 0.85
GCFC2-201ENST00000321027 PKD2Q13563 968 aa20.36■□□□□ 0.85
GCFC2-201ENST00000321027 DCAF11Q8TEB1 546 aa20.34■□□□□ 0.85
GCFC2-201ENST00000321027 L3MBTL2Q969R5 705 aa20.34■□□□□ 0.85
GCFC2-201ENST00000321027 NESP48681 1621 aa20.33■□□□□ 0.84
GCFC2-201ENST00000321027 ANP32BQ92688 251 aaKnown RBP20.31■□□□□ 0.84
GCFC2-201ENST00000321027 CC2D1BQ5T0F9 858 aaKnown RBP20.3■□□□□ 0.84
GCFC2-201ENST00000321027 NOP58Q9Y2X3 529 aaKnown RBP20.29■□□□□ 0.84
GCFC2-201ENST00000321027 HMGXB3Q12766 1538 aa20.29■□□□□ 0.84
GCFC2-201ENST00000321027 LAS1LQ9Y4W2 734 aaKnown RBP20.28■□□□□ 0.84
GCFC2-201ENST00000321027 ARAP1Q96P48 1450 aa20.27■□□□□ 0.84
GCFC2-201ENST00000321027 CUX1P39880 1505 aa20.26■□□□□ 0.83
GCFC2-201ENST00000321027 KNSTRNQ9Y448 316 aa20.26■□□□□ 0.83
GCFC2-201ENST00000321027 AQRO60306 1485 aaKnown RBP eCLIP20.26■□□□□ 0.839e-6■□□□□ 10.2
GCFC2-201ENST00000321027 HNRNPMP52272 730 aaKnown RBP eCLIP20.25■□□□□ 0.83
GCFC2-201ENST00000321027 PRXQ9BXM0 1461 aa20.25■□□□□ 0.83
GCFC2-201ENST00000321027 NUP155O75694 1391 aa20.24■□□□□ 0.83
GCFC2-201ENST00000321027 CCDC18Q5T9S5 1454 aa20.24■□□□□ 0.83
GCFC2-201ENST00000321027 TOP2BQ02880 1626 aa20.24■□□□□ 0.83
GCFC2-201ENST00000321027 CC2D2AQ9P2K1 1620 aa20.23■□□□□ 0.83
GCFC2-201ENST00000321027 ANKRD30AQ9BXX3 1397 aa20.21■□□□□ 0.83
GCFC2-201ENST00000321027 ERICH3Q5RHP9 1530 aa20.2■□□□□ 0.82
GCFC2-201ENST00000321027 PHLDB1Q86UU1 1377 aa20.2■□□□□ 0.82
GCFC2-201ENST00000321027 NEUROD2Q15784 382 aa20.2■□□□□ 0.82
GCFC2-201ENST00000321027 RGS3P49796 1198 aa20.2■□□□□ 0.82
GCFC2-201ENST00000321027 EFCAB2Q5VUJ9 269 aa20.2■□□□□ 0.82
GCFC2-201ENST00000321027 DNAJC5BQ9UF47 199 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms