RNA–Protein interactions for RNA: ENST00000316715.8

GPM6B-201, Transcript of glycoprotein M6B, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene GPM6B, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-201ENST00000316715 TIAM1Q13009 1591 aa12.96□□□□□ -0.33
GPM6B-201ENST00000316715 PCF11O94913 1555 aaKnown RBP12.96□□□□□ -0.33
GPM6B-201ENST00000316715 TDRD9Q8NDG6 1382 aaKnown RBP12.96□□□□□ -0.34
GPM6B-201ENST00000316715 EIF4G3O43432 1585 aaKnown RBP12.95□□□□□ -0.34
GPM6B-201ENST00000316715 AQRO60306 1485 aaKnown RBP eCLIP12.94□□□□□ -0.34
GPM6B-201ENST00000316715 ZNF608Q9ULD9 1512 aaPredicted RBP12.93□□□□□ -0.34
GPM6B-201ENST00000316715 SNAPC4Q5SXM2 1469 aa12.93□□□□□ -0.34
GPM6B-201ENST00000316715 GRIN2BQ13224 1484 aa12.9□□□□□ -0.34
GPM6B-201ENST00000316715 FHAD1B1AJZ9 1412 aa12.9□□□□□ -0.34
GPM6B-201ENST00000316715 RRBP1Q9P2E9 1410 aaKnown RBP12.9□□□□□ -0.34
GPM6B-201ENST00000316715 FYCO1Q9BQS8 1478 aa12.89□□□□□ -0.35
GPM6B-201ENST00000316715 KANK4Q5T7N3 995 aaPredicted RBP12.87□□□□□ -0.35
GPM6B-201ENST00000316715 CASKIN1Q8WXD9 1431 aa12.86□□□□□ -0.35
GPM6B-201ENST00000316715 IQGAP2Q13576 1575 aa12.85□□□□□ -0.35
GPM6B-201ENST00000316715 LRRC9Q6ZRR7 1453 aa12.85□□□□□ -0.35
GPM6B-201ENST00000316715 UGGT2Q9NYU1 1516 aa12.84□□□□□ -0.35
GPM6B-201ENST00000316715 FHOD3Q2V2M9 1422 aa12.84□□□□□ -0.35
GPM6B-201ENST00000316715 MAGI1Q96QZ7 1491 aaPredicted RBP12.8□□□□□ -0.36
GPM6B-201ENST00000316715 CEP170Q5SW79 1584 aa12.8□□□□□ -0.36
GPM6B-201ENST00000316715 ERCC6Q03468 1493 aa12.79□□□□□ -0.36
GPM6B-201ENST00000316715 GRIN2AQ12879 1464 aa12.79□□□□□ -0.36
GPM6B-201ENST00000316715 RANGAP1P46060 587 aaPredicted RBP12.79□□□□□ -0.36
GPM6B-201ENST00000316715 ARHGEF11O15085 1522 aa12.78□□□□□ -0.36
GPM6B-201ENST00000316715 ZEB1P37275 1124 aaPredicted RBP12.78□□□□□ -0.36
GPM6B-201ENST00000316715 FMN1Q68DA7 1419 aa12.77□□□□□ -0.36
GPM6B-201ENST00000316715 DISP1Q96F81 1524 aa12.77□□□□□ -0.36
GPM6B-201ENST00000316715 KIAA0556O60303 1618 aa12.77□□□□□ -0.37
GPM6B-201ENST00000316715 MAGI3Q5TCQ9 1506 aa12.75□□□□□ -0.37
GPM6B-201ENST00000316715 KIAA0586Q9BVV6 1533 aa12.75□□□□□ -0.37
GPM6B-201ENST00000316715 TTBK1Q5TCY1 1321 aaPredicted RBP12.74□□□□□ -0.37
GPM6B-201ENST00000316715 SYNJ2O15056 1496 aa12.74□□□□□ -0.37
GPM6B-201ENST00000316715 PHLDB1Q86UU1 1377 aa12.73□□□□□ -0.37
GPM6B-201ENST00000316715 NUP160Q12769 1436 aa12.73□□□□□ -0.37
GPM6B-201ENST00000316715 HECW1Q76N89 1606 aa12.71□□□□□ -0.37
GPM6B-201ENST00000316715 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.71□□□□□ -0.38
GPM6B-201ENST00000316715 CCNB3Q8WWL7 1395 aa12.7□□□□□ -0.38
GPM6B-201ENST00000316715 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.69□□□□□ -0.38
GPM6B-201ENST00000316715 EHBP1L1Q8N3D4 1523 aa12.68□□□□□ -0.38
GPM6B-201ENST00000316715 APLP2Q06481 763 aa12.68□□□□□ -0.38
GPM6B-201ENST00000316715 CCDC18Q5T9S5 1454 aa12.67□□□□□ -0.38
GPM6B-201ENST00000316715 SUPT6HQ7KZ85 1726 aaKnown RBP12.67□□□□□ -0.38
GPM6B-201ENST00000316715 RAPGEF6Q8TEU7 1601 aa12.65□□□□□ -0.38
GPM6B-201ENST00000316715 P3H3Q8IVL6 736 aa12.65□□□□□ -0.38
GPM6B-201ENST00000316715 EPRSP07814 1512 aaKnown RBP12.65□□□□□ -0.38
GPM6B-201ENST00000316715 SHROOM2Q13796 1616 aa12.65□□□□□ -0.39
GPM6B-201ENST00000316715 CHD1O14646 1710 aa12.64□□□□□ -0.39
GPM6B-201ENST00000316715 NUP153P49790 1475 aaKnown RBP12.62□□□□□ -0.39
GPM6B-201ENST00000316715 DHX57Q6P158 1386 aaKnown RBP12.62□□□□□ -0.39
GPM6B-201ENST00000316715 ADCY10Q96PN6 1610 aa12.62□□□□□ -0.39
GPM6B-201ENST00000316715 TCOF1Q13428 1488 aaKnown RBP12.61□□□□□ -0.39
GPM6B-201ENST00000316715 NCOA2Q15596 1464 aa12.61□□□□□ -0.39
GPM6B-201ENST00000316715 CDK13Q14004 1512 aaKnown RBP12.6□□□□□ -0.39
GPM6B-201ENST00000316715 FGD6Q6ZV73 1430 aa12.6□□□□□ -0.39
GPM6B-201ENST00000316715 ABCA8O94911 1581 aa12.59□□□□□ -0.39
GPM6B-201ENST00000316715 MAPKBP1O60336 1514 aa12.59□□□□□ -0.39
GPM6B-201ENST00000316715 HNRNPUL2Q1KMD3 747 aaKnown RBP12.59□□□□□ -0.39
GPM6B-201ENST00000316715 CCER1Q8TC90 406 aaPredicted RBP12.59□□□□□ -0.39
GPM6B-201ENST00000316715 PTPN23Q9H3S7 1636 aa12.58□□□□□ -0.4
GPM6B-201ENST00000316715 PELP1Q8IZL8 1130 aaKnown RBP12.57□□□□□ -0.4
GPM6B-201ENST00000316715 MYOM3Q5VTT5 1437 aa12.57□□□□□ -0.4
GPM6B-201ENST00000316715 PTPRKQ15262 1439 aa12.56□□□□□ -0.4
GPM6B-201ENST00000316715 CLSPNQ9HAW4 1339 aa12.55□□□□□ -0.4
GPM6B-201ENST00000316715 GCC2Q8IWJ2 1684 aa12.54□□□□□ -0.4
GPM6B-201ENST00000316715 CLASP1Q7Z460 1538 aa12.52□□□□□ -0.4
GPM6B-201ENST00000316715 RAB3GAP2Q9H2M9 1393 aa12.51□□□□□ -0.41
GPM6B-201ENST00000316715 PLB1Q6P1J6 1458 aa12.51□□□□□ -0.41
GPM6B-201ENST00000316715 SETD5Q9C0A6 1442 aa12.5□□□□□ -0.41
GPM6B-201ENST00000316715 MTUS2Q5JR59 1369 aa12.5□□□□□ -0.41
GPM6B-201ENST00000316715 MIA2Q96PC5 1412 aa12.49□□□□□ -0.41
GPM6B-201ENST00000316715 KIF14Q15058 1648 aa12.49□□□□□ -0.41
GPM6B-201ENST00000316715 HFM1A2PYH4 1435 aa12.48□□□□□ -0.41
GPM6B-201ENST00000316715 CROCC2H7BZ55 1655 aa12.48□□□□□ -0.41
GPM6B-201ENST00000316715 DNMT1P26358 1616 aaKnown RBP12.48□□□□□ -0.41
GPM6B-201ENST00000316715 AKNAQ7Z591 1439 aa12.47□□□□□ -0.41
GPM6B-201ENST00000316715 CDC42BPAQ5VT25 1732 aa12.47□□□□□ -0.41
GPM6B-201ENST00000316715 CHMP7Q8WUX9 453 aaPredicted RBP12.46□□□□□ -0.41
GPM6B-201ENST00000316715 ITSN2Q9NZM3 1697 aa12.46□□□□□ -0.41
GPM6B-201ENST00000316715 KDM6BO15054 1643 aa12.45□□□□□ -0.42
GPM6B-201ENST00000316715 ERCC6L2Q5T890 1561 aa12.45□□□□□ -0.42
GPM6B-201ENST00000316715 NAIPQ13075 1403 aa12.45□□□□□ -0.42
GPM6B-201ENST00000316715 DENND4BO75064 1496 aaPredicted RBP12.44□□□□□ -0.42
GPM6B-201ENST00000316715 ABCC10Q5T3U5 1492 aa12.44□□□□□ -0.42
GPM6B-201ENST00000316715 CARMIL2Q6F5E8 1435 aa12.44□□□□□ -0.42
GPM6B-201ENST00000316715 JPH4Q96JJ6 628 aa12.44□□□□□ -0.42
GPM6B-201ENST00000316715 TROQ12816 1431 aaPredicted RBP12.43□□□□□ -0.42
GPM6B-201ENST00000316715 ATP10BO94823 1461 aa12.42□□□□□ -0.42
GPM6B-201ENST00000316715 ADGBQ8N7X0 1667 aa12.4□□□□□ -0.42
GPM6B-201ENST00000316715 PRG4Q92954 1404 aaPredicted RBP12.4□□□□□ -0.42
GPM6B-201ENST00000316715 GPATCH8Q9UKJ3 1502 aaKnown RBP12.4□□□□□ -0.42
GPM6B-201ENST00000316715 KDM5BQ9UGL1 1544 aa12.38□□□□□ -0.43
GPM6B-201ENST00000316715 ATP1B4Q9UN42 357 aaPredicted RBP12.38□□□□□ -0.43
GPM6B-201ENST00000316715 CDC42BPBQ9Y5S2 1711 aa12.38□□□□□ -0.43
GPM6B-201ENST00000316715 DAPK1P53355 1430 aa12.37□□□□□ -0.43
GPM6B-201ENST00000316715 ABCC5O15440 1437 aa12.36□□□□□ -0.43
GPM6B-201ENST00000316715 UACAQ9BZF9 1416 aa12.36□□□□□ -0.43
GPM6B-201ENST00000316715 PREX2Q70Z35 1606 aa12.36□□□□□ -0.43
GPM6B-201ENST00000316715 ROCK1Q13464 1354 aa12.36□□□□□ -0.43
GPM6B-201ENST00000316715 CAMSAP2Q08AD1 1489 aa12.35□□□□□ -0.43
GPM6B-201ENST00000316715 FAM50AQ14320 339 aaKnown RBP12.35□□□□□ -0.43
GPM6B-201ENST00000316715 ABCC2Q92887 1545 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 143.8 ms