RNA–Protein interactions for RNA: ENST00000316673.8

HNF4A-202, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,470 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-202ENST00000316673 GOLGA3Q08378 1498 aa25.08■■□□□ 1.61
HNF4A-202ENST00000316673 CTTNBP2Q8WZ74 1663 aa25.03■■□□□ 1.6
HNF4A-202ENST00000316673 IQGAP2Q13576 1575 aa25.02■■□□□ 1.6
HNF4A-202ENST00000316673 SHROOM2Q13796 1616 aa24.99■■□□□ 1.59
HNF4A-202ENST00000316673 JPH4Q96JJ6 628 aa24.99■■□□□ 1.59
HNF4A-202ENST00000316673 UBTFP17480 764 aaKnown RBP24.98■■□□□ 1.59
HNF4A-202ENST00000316673 RIMBP3CA6NJZ7 1639 aa24.97■■□□□ 1.59
HNF4A-202ENST00000316673 RIMBP3BA6NNM3 1639 aa24.97■■□□□ 1.59
HNF4A-202ENST00000316673 RIMBP3Q9UFD9 1639 aa24.97■■□□□ 1.59
HNF4A-202ENST00000316673 ARHGEF11O15085 1522 aa24.9■■□□□ 1.58
HNF4A-202ENST00000316673 UGGT2Q9NYU1 1516 aa24.9■■□□□ 1.58
HNF4A-202ENST00000316673 PRG4Q92954 1404 aaPredicted RBP24.9■■□□□ 1.58
HNF4A-202ENST00000316673 EHMT2Q96KQ7 1210 aa24.89■■□□□ 1.58
HNF4A-202ENST00000316673 CARMIL2Q6F5E8 1435 aa24.88■■□□□ 1.57
HNF4A-202ENST00000316673 TNIKQ9UKE5 1360 aa24.84■■□□□ 1.57
HNF4A-202ENST00000316673 CYB5RLQ6IPT4 315 aa24.78■■□□□ 1.56
HNF4A-202ENST00000316673 DISP1Q96F81 1524 aa24.78■■□□□ 1.56
HNF4A-202ENST00000316673 ERCC6L2Q5T890 1561 aa24.76■■□□□ 1.55
HNF4A-202ENST00000316673 KIAA0556O60303 1618 aa24.76■■□□□ 1.55
HNF4A-202ENST00000316673 EFCAB5A4FU69 1503 aa24.75■■□□□ 1.55
HNF4A-202ENST00000316673 LOC105371045A0A1W2PR82 267 aa24.74■■□□□ 1.55
HNF4A-202ENST00000316673 SAMD9Q5K651 1589 aa24.73■■□□□ 1.55
HNF4A-202ENST00000316673 ARAP1Q96P48 1450 aa24.7■■□□□ 1.54
HNF4A-202ENST00000316673 RANGAP1P46060 587 aaPredicted RBP24.69■■□□□ 1.54
HNF4A-202ENST00000316673 PTPRGP23470 1445 aa24.68■■□□□ 1.54
HNF4A-202ENST00000316673 CLIP1P30622 1438 aa24.63■■□□□ 1.53
HNF4A-202ENST00000316673 TRHP20396 242 aaPredicted RBP24.63■■□□□ 1.53
HNF4A-202ENST00000316673 ARHGAP35Q9NRY4 1499 aa24.61■■□□□ 1.53
HNF4A-202ENST00000316673 CEP162Q5TB80 1403 aa24.6■■□□□ 1.53
HNF4A-202ENST00000316673 P3H3Q8IVL6 736 aa24.6■■□□□ 1.53
HNF4A-202ENST00000316673 FHOD3Q2V2M9 1422 aa24.56■■□□□ 1.52
HNF4A-202ENST00000316673 TTBK1Q5TCY1 1321 aaPredicted RBP24.55■■□□□ 1.52
HNF4A-202ENST00000316673 FMN1Q68DA7 1419 aa24.53■■□□□ 1.52
HNF4A-202ENST00000316673 UACAQ9BZF9 1416 aa24.53■■□□□ 1.52
HNF4A-202ENST00000316673 UHRF1BP1LA0JNW5 1464 aa24.49■■□□□ 1.51
HNF4A-202ENST00000316673 ABCC2Q92887 1545 aa24.46■■□□□ 1.51
HNF4A-202ENST00000316673 ABCA8O94911 1581 aa24.46■■□□□ 1.51
HNF4A-202ENST00000316673 PLB1Q6P1J6 1458 aa24.45■■□□□ 1.5
HNF4A-202ENST00000316673 ADCY10Q96PN6 1610 aa24.43■■□□□ 1.5
HNF4A-202ENST00000316673 NPM1P06748 294 aaKnown RBP eCLIP24.43■■□□□ 1.5
HNF4A-202ENST00000316673 RAPGEF6Q8TEU7 1601 aa24.42■■□□□ 1.5
HNF4A-202ENST00000316673 KDM5BQ9UGL1 1544 aa24.36■■□□□ 1.49
HNF4A-202ENST00000316673 CASKIN1Q8WXD9 1431 aa24.35■■□□□ 1.49
HNF4A-202ENST00000316673 HECW1Q76N89 1606 aa24.33■■□□□ 1.49
HNF4A-202ENST00000316673 FYCO1Q9BQS8 1478 aa24.32■■□□□ 1.48
HNF4A-202ENST00000316673 NUP153P49790 1475 aaKnown RBP24.31■■□□□ 1.48
HNF4A-202ENST00000316673 VPS8Q8N3P4 1428 aa24.3■■□□□ 1.48
HNF4A-202ENST00000316673 PCF11O94913 1555 aaKnown RBP24.28■■□□□ 1.48
HNF4A-202ENST00000316673 ATP1B4Q9UN42 357 aaPredicted RBP24.27■■□□□ 1.48
HNF4A-202ENST00000316673 MAPKBP1O60336 1514 aa24.27■■□□□ 1.48
HNF4A-202ENST00000316673 ZCCHC11Q5TAX3 1644 aaKnown RBP24.27■■□□□ 1.48
HNF4A-202ENST00000316673 ATP10BO94823 1461 aa24.25■■□□□ 1.47
HNF4A-202ENST00000316673 CCDC18Q5T9S5 1454 aa24.24■■□□□ 1.47
HNF4A-202ENST00000316673 EPRSP07814 1512 aaKnown RBP24.23■■□□□ 1.47
HNF4A-202ENST00000316673 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.22■■□□□ 1.47
HNF4A-202ENST00000316673 HNRNPUL2Q1KMD3 747 aaKnown RBP24.22■■□□□ 1.47
HNF4A-202ENST00000316673 CDK11AQ9UQ88 783 aaPredicted RBP24.2■■□□□ 1.47
HNF4A-202ENST00000316673 ARID3CA6NKF2 412 aa24.19■■□□□ 1.46
HNF4A-202ENST00000316673 ASXL2Q76L83 1435 aa24.18■■□□□ 1.46
HNF4A-202ENST00000316673 PLEKHD1A6NEE1 506 aa24.16■■□□□ 1.46
HNF4A-202ENST00000316673 AEBP2Q6ZN18 517 aaPredicted RBP24.16■■□□□ 1.46
HNF4A-202ENST00000316673 CDK13Q14004 1512 aaKnown RBP24.15■■□□□ 1.46
HNF4A-202ENST00000316673 WDR7Q9Y4E6 1490 aa24.15■■□□□ 1.46
HNF4A-202ENST00000316673 LRRIQ1Q96JM4 1722 aa24.12■■□□□ 1.45
HNF4A-202ENST00000316673 APLP2Q06481 763 aa24.1■■□□□ 1.45
HNF4A-202ENST00000316673 ABCC10Q5T3U5 1492 aa24.09■■□□□ 1.45
HNF4A-202ENST00000316673 MAP3K1Q13233 1512 aa24.09■■□□□ 1.45
HNF4A-202ENST00000316673 TROQ12816 1431 aaPredicted RBP24.04■■□□□ 1.44
HNF4A-202ENST00000316673 TIAM1Q13009 1591 aa24.04■■□□□ 1.44
HNF4A-202ENST00000316673 CFAP43Q8NDM7 1665 aa24.04■■□□□ 1.44
HNF4A-202ENST00000316673 DIP2BQ9P265 1576 aa24.03■■□□□ 1.44
HNF4A-202ENST00000316673 GLI2P10070 1586 aa24.02■■□□□ 1.44
HNF4A-202ENST00000316673 KCNH8Q96L42 1107 aa24.01■■□□□ 1.43
HNF4A-202ENST00000316673 MTUS2Q5JR59 1369 aa24.01■■□□□ 1.43
HNF4A-202ENST00000316673 FAM69CQ0P6D2 419 aa24■■□□□ 1.43
HNF4A-202ENST00000316673 KIF13AQ9H1H9 1805 aa23.97■■□□□ 1.43
HNF4A-202ENST00000316673 EHBP1L1Q8N3D4 1523 aa23.96■■□□□ 1.43
HNF4A-202ENST00000316673 KIF14Q15058 1648 aa23.96■■□□□ 1.43
HNF4A-202ENST00000316673 MAGI3Q5TCQ9 1506 aa23.94■■□□□ 1.42
HNF4A-202ENST00000316673 ABCA9Q8IUA7 1624 aa23.93■■□□□ 1.42
HNF4A-202ENST00000316673 LRRC9Q6ZRR7 1453 aa23.93■■□□□ 1.42
HNF4A-202ENST00000316673 MAP3K4Q9Y6R4 1608 aa23.89■■□□□ 1.42
HNF4A-202ENST00000316673 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.89■■□□□ 1.41
HNF4A-202ENST00000316673 CD109Q6YHK3 1445 aa23.88■■□□□ 1.41
HNF4A-202ENST00000316673 SUPT6HQ7KZ85 1726 aaKnown RBP23.86■■□□□ 1.41
HNF4A-202ENST00000316673 KANK4Q5T7N3 995 aaPredicted RBP23.85■■□□□ 1.41
HNF4A-202ENST00000316673 TTC37Q6PGP7 1564 aa23.83■■□□□ 1.41
HNF4A-202ENST00000316673 TEX14Q8IWB6 1497 aa23.83■■□□□ 1.41
HNF4A-202ENST00000316673 ARAP3Q8WWN8 1544 aa23.81■■□□□ 1.4
HNF4A-202ENST00000316673 NCOA2Q15596 1464 aa23.8■■□□□ 1.4
HNF4A-202ENST00000316673 PLCH2O75038 1416 aa23.8■■□□□ 1.4
HNF4A-202ENST00000316673 CCNB3Q8WWL7 1395 aa23.8■■□□□ 1.4
HNF4A-202ENST00000316673 MYO5CQ9NQX4 1742 aa23.79■■□□□ 1.4
HNF4A-202ENST00000316673 TSPOAP1O95153 1857 aa23.78■■□□□ 1.4
HNF4A-202ENST00000316673 PHLDB1Q86UU1 1377 aa23.76■■□□□ 1.39
HNF4A-202ENST00000316673 PPRC1Q5VV67 1664 aaKnown RBP23.74■■□□□ 1.39
HNF4A-202ENST00000316673 EFCAB2Q5VUJ9 269 aa23.74■■□□□ 1.39
HNF4A-202ENST00000316673 CFAP74Q9C0B2 1584 aa23.74■■□□□ 1.39
HNF4A-202ENST00000316673 GPATCH8Q9UKJ3 1502 aaKnown RBP23.73■■□□□ 1.39
HNF4A-202ENST00000316673 ITSN2Q9NZM3 1697 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms