RNA–Protein interactions for RNA: ENST00000316087.12

SPATA9-202, Transcript of spermatogenesis associated 9, humanhuman

TSL 1 (best)

Gene SPATA9, Length 1,583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA9-202ENST00000316087 CEP164Q9UPV0 1460 aa9.31□□□□□ -0.92
SPATA9-202ENST00000316087 DIEXFQ68CQ4 756 aaKnown RBP9.31□□□□□ -0.92
SPATA9-202ENST00000316087 UNC13AQ9UPW8 1703 aa9.3□□□□□ -0.92
SPATA9-202ENST00000316087 BAZ1BQ9UIG0 1483 aaKnown RBP9.3□□□□□ -0.92
SPATA9-202ENST00000316087 ABCC8Q09428 1581 aa9.3□□□□□ -0.92
SPATA9-202ENST00000316087 SAMD1Q6SPF0 538 aaPredicted RBP9.29□□□□□ -0.92
SPATA9-202ENST00000316087 VSIG10Q8N0Z9 540 aa9.29□□□□□ -0.92
SPATA9-202ENST00000316087 CLSPNQ9HAW4 1339 aa9.25□□□□□ -0.93
SPATA9-202ENST00000316087 ZNF316A6NFI3 1004 aaPredicted RBP9.24□□□□□ -0.93
SPATA9-202ENST00000316087 UBTFP17480 764 aaKnown RBP9.24□□□□□ -0.93
SPATA9-202ENST00000316087 SOGA1O94964 1423 aa9.23□□□□□ -0.93
SPATA9-202ENST00000316087 HOMEZQ8IX15 550 aa9.22□□□□□ -0.93
SPATA9-202ENST00000316087 RBM42Q9BTD8 480 aaKnown RBP9.22□□□□□ -0.93
SPATA9-202ENST00000316087 GTF3C3Q9Y5Q9 886 aa9.21□□□□□ -0.93
SPATA9-202ENST00000316087 VPS8Q8N3P4 1428 aa9.21□□□□□ -0.94
SPATA9-202ENST00000316087 CLIP1P30622 1438 aa9.19□□□□□ -0.94
SPATA9-202ENST00000316087 ERICH3Q5RHP9 1530 aa9.18□□□□□ -0.94
SPATA9-202ENST00000316087 NEUROD1Q13562 356 aa9.17□□□□□ -0.94
SPATA9-202ENST00000316087 BICRAQ9NZM4 1560 aa9.17□□□□□ -0.94
SPATA9-202ENST00000316087 SYNJ1O43426 1573 aa9.15□□□□□ -0.94
SPATA9-202ENST00000316087 TOP2BQ02880 1626 aa9.15□□□□□ -0.95
SPATA9-202ENST00000316087 BIVM-ERCC5R4GMW8 1640 aa9.14□□□□□ -0.95
SPATA9-202ENST00000316087 KDM2AQ9Y2K7 1162 aa9.14□□□□□ -0.95
SPATA9-202ENST00000316087 ATAD2BQ9ULI0 1458 aa9.13□□□□□ -0.95
SPATA9-202ENST00000316087 RUSC2Q8N2Y8 1516 aa9.12□□□□□ -0.95
SPATA9-202ENST00000316087 POLA2Q14181 598 aa9.1□□□□□ -0.95
SPATA9-202ENST00000316087 ERICH6Q7L0X2 663 aa9.1□□□□□ -0.95
SPATA9-202ENST00000316087 MYCNP04198 464 aaPredicted RBP9.09□□□□□ -0.95
SPATA9-202ENST00000316087 CHRDL2Q6WN34 429 aa9.09□□□□□ -0.95
SPATA9-202ENST00000316087 HMGXB3Q12766 1538 aa9.08□□□□□ -0.96
SPATA9-202ENST00000316087 FBLN2P98095 1184 aa9.07□□□□□ -0.96
SPATA9-202ENST00000316087 PRXQ9BXM0 1461 aa9.05□□□□□ -0.96
SPATA9-202ENST00000316087 CUX2O14529 1486 aa9.05□□□□□ -0.96
SPATA9-202ENST00000316087 RAPGEF2Q9Y4G8 1499 aa9.05□□□□□ -0.96
SPATA9-202ENST00000316087 RANGAP1P46060 587 aaPredicted RBP9.04□□□□□ -0.96
SPATA9-202ENST00000316087 MAP3K1Q13233 1512 aa9.04□□□□□ -0.96
SPATA9-202ENST00000316087 KIF27Q86VH2 1401 aa9.03□□□□□ -0.96
SPATA9-202ENST00000316087 RRBP1Q9P2E9 1410 aaKnown RBP9.02□□□□□ -0.96
SPATA9-202ENST00000316087 NCAPD3P42695 1498 aa9.01□□□□□ -0.97
SPATA9-202ENST00000316087 TTBK1Q5TCY1 1321 aaPredicted RBP9□□□□□ -0.97
SPATA9-202ENST00000316087 TMEM132AQ24JP5 1023 aa9□□□□□ -0.97
SPATA9-202ENST00000316087 PRDM2Q13029 1718 aa9□□□□□ -0.97
SPATA9-202ENST00000316087 DHX57Q6P158 1386 aaKnown RBP8.98□□□□□ -0.97
SPATA9-202ENST00000316087 ATXN8OSP0DMR3 200 aa8.98□□□□□ -0.97
SPATA9-202ENST00000316087 MIER1Q8N108 512 aa8.98□□□□□ -0.97
SPATA9-202ENST00000316087 ARAP1Q96P48 1450 aa8.97□□□□□ -0.97
SPATA9-202ENST00000316087 CCNB3Q8WWL7 1395 aa8.95□□□□□ -0.98
SPATA9-202ENST00000316087 C14orf37Q86TY3 774 aa8.95□□□□□ -0.98
SPATA9-202ENST00000316087 PABPN1Q86U42 306 aaKnown RBP eCLIP8.95□□□□□ -0.98
SPATA9-202ENST00000316087 CFTRP13569 1480 aa8.94□□□□□ -0.98
SPATA9-202ENST00000316087 ZBTB12Q9Y330 459 aaPredicted RBP8.94□□□□□ -0.98
SPATA9-202ENST00000316087 AKT1S1Q96B36 256 aa8.93□□□□□ -0.98
SPATA9-202ENST00000316087 YTHDC1Q96MU7 727 aaKnown RBP8.93□□□□□ -0.98
SPATA9-202ENST00000316087 PODXL2Q9NZ53 605 aa8.93□□□□□ -0.98
SPATA9-202ENST00000316087 FHAD1B1AJZ9 1412 aa8.92□□□□□ -0.98
SPATA9-202ENST00000316087 CUX1P39880 1505 aa8.92□□□□□ -0.98
SPATA9-202ENST00000316087 TIAM1Q13009 1591 aa8.9□□□□□ -0.98
SPATA9-202ENST00000316087 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.9□□□□□ -0.99
SPATA9-202ENST00000316087 PAXIP1Q6ZW49 1069 aaPredicted RBP8.89□□□□□ -0.99
SPATA9-202ENST00000316087 ARHGAP35Q9NRY4 1499 aa8.89□□□□□ -0.99
SPATA9-202ENST00000316087 SP7Q8TDD2 431 aaPredicted RBP8.88□□□□□ -0.99
SPATA9-202ENST00000316087 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.88□□□□□ -0.99
SPATA9-202ENST00000316087 CFAP43Q8NDM7 1665 aa8.87□□□□□ -0.99
SPATA9-202ENST00000316087 EFCAB5A4FU69 1503 aa8.87□□□□□ -0.99
SPATA9-202ENST00000316087 CFAP44Q96MT7 982 aa8.86□□□□□ -0.99
SPATA9-202ENST00000316087 SETD5Q9C0A6 1442 aa8.86□□□□□ -0.99
SPATA9-202ENST00000316087 ATF5Q9Y2D1 282 aaPredicted RBP8.86□□□□□ -0.99
SPATA9-202ENST00000316087 AQRO60306 1485 aaKnown RBP eCLIP8.84□□□□□ -0.99
SPATA9-202ENST00000316087 REM2Q8IYK8 340 aaPredicted RBP8.84□□□□□ -0.99
SPATA9-202ENST00000316087 BBXQ8WY36 941 aaPredicted RBP8.84□□□□□ -0.99
SPATA9-202ENST00000316087 LRRC9Q6ZRR7 1453 aa8.84□□□□□ -0.99
SPATA9-202ENST00000316087 FYCO1Q9BQS8 1478 aa8.82□□□□□ -1
SPATA9-202ENST00000316087 PKD2Q13563 968 aa8.82□□□□□ -1
SPATA9-202ENST00000316087 KANK4Q5T7N3 995 aaPredicted RBP8.82□□□□□ -1
SPATA9-202ENST00000316087 OSCARQ8IYS5 282 aa8.82□□□□□ -1
SPATA9-202ENST00000316087 CC2D2AQ9P2K1 1620 aa8.82□□□□□ -1
SPATA9-202ENST00000316087 RAB3GAP2Q9H2M9 1393 aa8.82□□□□□ -1
SPATA9-202ENST00000316087 NBR1Q14596 966 aa8.82□□□□□ -1
SPATA9-202ENST00000316087 SUPT16HQ9Y5B9 1047 aaKnown RBP8.82□□□□□ -1
SPATA9-202ENST00000316087 CUL7Q14999 1698 aa8.81□□□□□ -1
SPATA9-202ENST00000316087 PIP4P2Q8N4L2 257 aa8.81□□□□□ -1
SPATA9-202ENST00000316087 FBXO3Q9UK99 471 aa8.81□□□□□ -1
SPATA9-202ENST00000316087 IGF1RP08069 1367 aa8.81□□□□□ -1
SPATA9-202ENST00000316087 CARMIL1Q5VZK9 1371 aa8.81□□□□□ -1
SPATA9-202ENST00000316087 CCER2I3L3R5 266 aa8.8□□□□□ -1
SPATA9-202ENST00000316087 TSHZ2Q9NRE2 1034 aa8.8□□□□□ -1
SPATA9-202ENST00000316087 MAPKBP1O60336 1514 aa8.8□□□□□ -1
SPATA9-202ENST00000316087 CADPSQ9ULU8 1353 aa8.79□□□□□ -1
SPATA9-202ENST00000316087 FGD5Q6ZNL6 1462 aa8.78□□□□□ -1
SPATA9-202ENST00000316087 FMN1Q68DA7 1419 aa8.78□□□□□ -1
SPATA9-202ENST00000316087 NEFLP07196 543 aa8.78□□□□□ -1
SPATA9-202ENST00000316087 CASKIN1Q8WXD9 1431 aa8.77□□□□□ -1.01
SPATA9-202ENST00000316087 THOC2Q8NI27 1593 aaKnown RBP8.77□□□□□ -1.01
SPATA9-202ENST00000316087 NPM1P06748 294 aaKnown RBP eCLIP8.77□□□□□ -1.01
SPATA9-202ENST00000316087 HAX1O00165 279 aa8.76□□□□□ -1.01
SPATA9-202ENST00000316087 KLHL34Q8N239 644 aa8.76□□□□□ -1.01
SPATA9-202ENST00000316087 KIF21AQ7Z4S6 1674 aa8.76□□□□□ -1.01
SPATA9-202ENST00000316087 CTTNBP2Q8WZ74 1663 aa8.76□□□□□ -1.01
SPATA9-202ENST00000316087 DNMBPQ6XZF7 1577 aa8.75□□□□□ -1.01
SPATA9-202ENST00000316087 PITPNM1O00562 1244 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms