RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 ABCA5Q8WWZ7 1642 aa10.8□□□□□ -0.68
LYSMD3-201ENST00000315948 ARID3CA6NKF2 412 aa10.8□□□□□ -0.68
LYSMD3-201ENST00000315948 FBLN2P98095 1184 aa10.79□□□□□ -0.68
LYSMD3-201ENST00000315948 WDR62O43379 1518 aa10.76□□□□□ -0.69
LYSMD3-201ENST00000315948 ITGAEP38570 1179 aa10.74□□□□□ -0.69
LYSMD3-201ENST00000315948 THOC2Q8NI27 1593 aaKnown RBP10.74□□□□□ -0.69
LYSMD3-201ENST00000315948 SNAPC4Q5SXM2 1469 aa10.71□□□□□ -0.69
LYSMD3-201ENST00000315948 CUL7Q14999 1698 aa10.7□□□□□ -0.7
LYSMD3-201ENST00000315948 IFT140Q96RY7 1462 aa10.7□□□□□ -0.7
LYSMD3-201ENST00000315948 CCER1Q8TC90 406 aaPredicted RBP10.7□□□□□ -0.7
LYSMD3-201ENST00000315948 PBRM1Q86U86 1689 aa10.7□□□□□ -0.7
LYSMD3-201ENST00000315948 EIF4G3O43432 1585 aaKnown RBP10.7□□□□□ -0.7
LYSMD3-201ENST00000315948 GRIN2BQ13224 1484 aa10.69□□□□□ -0.7
LYSMD3-201ENST00000315948 PCF11O94913 1555 aaKnown RBP10.68□□□□□ -0.7
LYSMD3-201ENST00000315948 FHAD1B1AJZ9 1412 aa10.67□□□□□ -0.7
LYSMD3-201ENST00000315948 CHMP7Q8WUX9 453 aaPredicted RBP10.67□□□□□ -0.7
LYSMD3-201ENST00000315948 ADAMTS12P58397 1594 aa10.67□□□□□ -0.7
LYSMD3-201ENST00000315948 CTTNBP2Q8WZ74 1663 aa10.65□□□□□ -0.7
LYSMD3-201ENST00000315948 PHLDB1Q86UU1 1377 aa10.63□□□□□ -0.71
LYSMD3-201ENST00000315948 TIAM1Q13009 1591 aa10.61□□□□□ -0.71
LYSMD3-201ENST00000315948 GRIN2AQ12879 1464 aa10.61□□□□□ -0.71
LYSMD3-201ENST00000315948 FAM50AQ14320 339 aaKnown RBP10.61□□□□□ -0.71
LYSMD3-201ENST00000315948 LRRC9Q6ZRR7 1453 aa10.6□□□□□ -0.71
LYSMD3-201ENST00000315948 IQGAP2Q13576 1575 aa10.58□□□□□ -0.72
LYSMD3-201ENST00000315948 SAMD9Q5K651 1589 aa10.58□□□□□ -0.72
LYSMD3-201ENST00000315948 CEP170Q5SW79 1584 aa10.57□□□□□ -0.72
LYSMD3-201ENST00000315948 CASKIN1Q8WXD9 1431 aa10.57□□□□□ -0.72
LYSMD3-201ENST00000315948 LRRIQ1Q96JM4 1722 aa10.57□□□□□ -0.72
LYSMD3-201ENST00000315948 EFCAB5A4FU69 1503 aa10.57□□□□□ -0.72
LYSMD3-201ENST00000315948 CCNB3Q8WWL7 1395 aa10.56□□□□□ -0.72
LYSMD3-201ENST00000315948 CDK13Q14004 1512 aaKnown RBP10.56□□□□□ -0.72
LYSMD3-201ENST00000315948 DISP1Q96F81 1524 aa10.56□□□□□ -0.72
LYSMD3-201ENST00000315948 SYNJ2O15056 1496 aa10.55□□□□□ -0.72
LYSMD3-201ENST00000315948 FMN1Q68DA7 1419 aa10.55□□□□□ -0.72
LYSMD3-201ENST00000315948 JPH4Q96JJ6 628 aa10.55□□□□□ -0.72
LYSMD3-201ENST00000315948 MAGI3Q5TCQ9 1506 aa10.55□□□□□ -0.72
LYSMD3-201ENST00000315948 FYCO1Q9BQS8 1478 aa10.54□□□□□ -0.72
LYSMD3-201ENST00000315948 MTUS2Q5JR59 1369 aa10.53□□□□□ -0.72
LYSMD3-201ENST00000315948 KIAA0586Q9BVV6 1533 aa10.53□□□□□ -0.72
LYSMD3-201ENST00000315948 RRBP1Q9P2E9 1410 aaKnown RBP10.53□□□□□ -0.72
LYSMD3-201ENST00000315948 MAGI1Q96QZ7 1491 aaPredicted RBP10.53□□□□□ -0.72
LYSMD3-201ENST00000315948 PLB1Q6P1J6 1458 aa10.52□□□□□ -0.73
LYSMD3-201ENST00000315948 CFAP43Q8NDM7 1665 aa10.5□□□□□ -0.73
LYSMD3-201ENST00000315948 UGGT2Q9NYU1 1516 aa10.49□□□□□ -0.73
LYSMD3-201ENST00000315948 KIAA0556O60303 1618 aa10.48□□□□□ -0.73
LYSMD3-201ENST00000315948 ZEB1P37275 1124 aaPredicted RBP10.48□□□□□ -0.73
LYSMD3-201ENST00000315948 NUP160Q12769 1436 aa10.48□□□□□ -0.73
LYSMD3-201ENST00000315948 CHIC2Q9UKJ5 165 aa10.48□□□□□ -0.73
LYSMD3-201ENST00000315948 EPRSP07814 1512 aaKnown RBP10.48□□□□□ -0.73
LYSMD3-201ENST00000315948 ZNF644Q9H582 1327 aaPredicted RBP10.47□□□□□ -0.73
LYSMD3-201ENST00000315948 NCOA2Q15596 1464 aa10.47□□□□□ -0.73
LYSMD3-201ENST00000315948 PTPRKQ15262 1439 aa10.47□□□□□ -0.73
LYSMD3-201ENST00000315948 NUP153P49790 1475 aaKnown RBP10.46□□□□□ -0.73
LYSMD3-201ENST00000315948 MAP3K1Q13233 1512 aa10.46□□□□□ -0.73
LYSMD3-201ENST00000315948 ERCC6L2Q5T890 1561 aa10.46□□□□□ -0.74
LYSMD3-201ENST00000315948 RAB3GAP2Q9H2M9 1393 aa10.45□□□□□ -0.74
LYSMD3-201ENST00000315948 PRG4Q92954 1404 aaPredicted RBP10.45□□□□□ -0.74
LYSMD3-201ENST00000315948 DHX57Q6P158 1386 aaKnown RBP10.45□□□□□ -0.74
LYSMD3-201ENST00000315948 CHD1O14646 1710 aa10.44□□□□□ -0.74
LYSMD3-201ENST00000315948 FGD6Q6ZV73 1430 aa10.44□□□□□ -0.74
LYSMD3-201ENST00000315948 RRP7BPQ9NSQ0 103 aa10.42□□□□□ -0.74
LYSMD3-201ENST00000315948 ZNF777Q9ULD5 760 aaPredicted RBP10.41□□□□□ -0.74
LYSMD3-201ENST00000315948 HECW1Q76N89 1606 aa10.4□□□□□ -0.74
LYSMD3-201ENST00000315948 MYOM3Q5VTT5 1437 aa10.39□□□□□ -0.75
LYSMD3-201ENST00000315948 SIN3AQ96ST3 1273 aa10.39□□□□□ -0.75
LYSMD3-201ENST00000315948 RAPGEF6Q8TEU7 1601 aa10.38□□□□□ -0.75
LYSMD3-201ENST00000315948 CARMIL2Q6F5E8 1435 aa10.38□□□□□ -0.75
LYSMD3-201ENST00000315948 NEUROD1Q13562 356 aa10.37□□□□□ -0.75
LYSMD3-201ENST00000315948 EHBP1L1Q8N3D4 1523 aa10.37□□□□□ -0.75
LYSMD3-201ENST00000315948 PTPRGP23470 1445 aa10.37□□□□□ -0.75
LYSMD3-201ENST00000315948 CCDC18Q5T9S5 1454 aa10.36□□□□□ -0.75
LYSMD3-201ENST00000315948 SETD5Q9C0A6 1442 aa10.36□□□□□ -0.75
LYSMD3-201ENST00000315948 KIF14Q15058 1648 aa10.35□□□□□ -0.75
LYSMD3-201ENST00000315948 SUPT6HQ7KZ85 1726 aaKnown RBP10.35□□□□□ -0.75
LYSMD3-201ENST00000315948 ATP10BO94823 1461 aa10.35□□□□□ -0.75
LYSMD3-201ENST00000315948 ARHGEF11O15085 1522 aa10.34□□□□□ -0.75
LYSMD3-201ENST00000315948 KCNH8Q96L42 1107 aa10.34□□□□□ -0.75
LYSMD3-201ENST00000315948 FOXD1Q16676 465 aa10.33□□□□□ -0.76
LYSMD3-201ENST00000315948 PTPN23Q9H3S7 1636 aa10.33□□□□□ -0.76
LYSMD3-201ENST00000315948 MAPKBP1O60336 1514 aa10.32□□□□□ -0.76
LYSMD3-201ENST00000315948 CFDP1Q9UEE9 299 aaPredicted RBP10.32□□□□□ -0.76
LYSMD3-201ENST00000315948 PLEKHD1A6NEE1 506 aa10.31□□□□□ -0.76
LYSMD3-201ENST00000315948 KDM6BO15054 1643 aa10.31□□□□□ -0.76
LYSMD3-201ENST00000315948 ABCA8O94911 1581 aa10.3□□□□□ -0.76
LYSMD3-201ENST00000315948 CDK11AQ9UQ88 783 aaPredicted RBP10.3□□□□□ -0.76
LYSMD3-201ENST00000315948 TROQ12816 1431 aaPredicted RBP10.3□□□□□ -0.76
LYSMD3-201ENST00000315948 NAIPQ13075 1403 aa10.3□□□□□ -0.76
LYSMD3-201ENST00000315948 GPATCH8Q9UKJ3 1502 aaKnown RBP10.28□□□□□ -0.76
LYSMD3-201ENST00000315948 HNRNPMP52272 730 aaKnown RBP eCLIP10.28□□□□□ -0.76
LYSMD3-201ENST00000315948 TRIM52Q96A61 297 aa10.28□□□□□ -0.76
LYSMD3-201ENST00000315948 HIRIP3Q9BW71 556 aaPredicted RBP10.28□□□□□ -0.76
LYSMD3-201ENST00000315948 UACAQ9BZF9 1416 aa10.27□□□□□ -0.77
LYSMD3-201ENST00000315948 ABCC5O15440 1437 aa10.26□□□□□ -0.77
LYSMD3-201ENST00000315948 HFM1A2PYH4 1435 aa10.26□□□□□ -0.77
LYSMD3-201ENST00000315948 CLASP1Q7Z460 1538 aa10.26□□□□□ -0.77
LYSMD3-201ENST00000315948 SHROOM2Q13796 1616 aa10.25□□□□□ -0.77
LYSMD3-201ENST00000315948 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.25□□□□□ -0.77
LYSMD3-201ENST00000315948 DIEXFQ68CQ4 756 aaKnown RBP10.24□□□□□ -0.77
LYSMD3-201ENST00000315948 TCOF1Q13428 1488 aaKnown RBP10.24□□□□□ -0.77
LYSMD3-201ENST00000315948 DAPK1P53355 1430 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms