RNA–Protein interactions for RNA: ENST00000313433.11

RPA2-201, Transcript of replication protein A2, humanhuman

TSL 1 (best) BASIC

Gene RPA2, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA2-201ENST00000313433 KIAA0586Q9BVV6 1533 aa31.39■■■□□ 2.62
RPA2-201ENST00000313433 PRG4Q92954 1404 aaPredicted RBP31.39■■■□□ 2.62
RPA2-201ENST00000313433 JPH4Q96JJ6 628 aa31.36■■■□□ 2.61
RPA2-201ENST00000313433 RAPGEF2Q9Y4G8 1499 aa31.27■■■□□ 2.6
RPA2-201ENST00000313433 IQGAP2Q13576 1575 aa31.22■■■□□ 2.59
RPA2-201ENST00000313433 PRXQ9BXM0 1461 aa31.16■■■□□ 2.58
RPA2-201ENST00000313433 CTTNBP2Q8WZ74 1663 aa31.13■■■□□ 2.57
RPA2-201ENST00000313433 ADCY10Q96PN6 1610 aa31.09■■■□□ 2.57
RPA2-201ENST00000313433 DISP1Q96F81 1524 aa31.08■■■□□ 2.57
RPA2-201ENST00000313433 UGGT2Q9NYU1 1516 aa31.06■■■□□ 2.56
RPA2-201ENST00000313433 TRHP20396 242 aaPredicted RBP31.05■■■□□ 2.56
RPA2-201ENST00000313433 KIAA0556O60303 1618 aa30.98■■■□□ 2.55
RPA2-201ENST00000313433 CHIC1Q5VXU3 224 aa30.96■■■□□ 2.55
RPA2-201ENST00000313433 CARMIL2Q6F5E8 1435 aa30.96■■■□□ 2.55
RPA2-201ENST00000313433 TNIKQ9UKE5 1360 aa30.94■■■□□ 2.54
RPA2-201ENST00000313433 KIF13AQ9H1H9 1805 aa30.93■■■□□ 2.54
RPA2-201ENST00000313433 PTPRGP23470 1445 aa30.92■■■□□ 2.54
RPA2-201ENST00000313433 CSRNP3Q8WYN3 585 aa30.92■■■□□ 2.54
RPA2-201ENST00000313433 EEA1Q15075 1411 aa30.91■■■□□ 2.54
RPA2-201ENST00000313433 MAPKBP1O60336 1514 aa30.87■■■□□ 2.53
RPA2-201ENST00000313433 TTBK1Q5TCY1 1321 aaPredicted RBP30.82■■■□□ 2.52
RPA2-201ENST00000313433 UHRF1BP1LA0JNW5 1464 aa30.78■■■□□ 2.52
RPA2-201ENST00000313433 KIF21BO75037 1637 aa30.78■■■□□ 2.52
RPA2-201ENST00000313433 FAM9AQ8IZU1 332 aaPredicted RBP30.77■■■□□ 2.52
RPA2-201ENST00000313433 ABCC2Q92887 1545 aa30.77■■■□□ 2.52
RPA2-201ENST00000313433 DIP2BQ9P265 1576 aa30.76■■■□□ 2.52
RPA2-201ENST00000313433 UACAQ9BZF9 1416 aa30.75■■■□□ 2.51
RPA2-201ENST00000313433 ABCC10Q5T3U5 1492 aa30.74■■■□□ 2.51
RPA2-201ENST00000313433 GOLGA3Q08378 1498 aa30.73■■■□□ 2.51
RPA2-201ENST00000313433 SAMD9Q5K651 1589 aa30.71■■■□□ 2.51
RPA2-201ENST00000313433 NPM1P06748 294 aaKnown RBP eCLIP30.68■■■□□ 2.5
RPA2-201ENST00000313433 PLB1Q6P1J6 1458 aa30.67■■■□□ 2.5
RPA2-201ENST00000313433 ABCA8O94911 1581 aa30.66■■■□□ 2.5
RPA2-201ENST00000313433 ZCCHC11Q5TAX3 1644 aaKnown RBP30.66■■■□□ 2.5
RPA2-201ENST00000313433 KDM5BQ9UGL1 1544 aa30.66■■■□□ 2.5
RPA2-201ENST00000313433 ASXL2Q76L83 1435 aa30.59■■■□□ 2.49
RPA2-201ENST00000313433 FAM69CQ0P6D2 419 aa30.57■■■□□ 2.48
RPA2-201ENST00000313433 P3H3Q8IVL6 736 aa30.52■■■□□ 2.48
RPA2-201ENST00000313433 TSPOAP1O95153 1857 aa30.5■■■□□ 2.47
RPA2-201ENST00000313433 GLI2P10070 1586 aa30.49■■■□□ 2.47
RPA2-201ENST00000313433 PPRC1Q5VV67 1664 aaKnown RBP30.49■■■□□ 2.47
RPA2-201ENST00000313433 EPRSP07814 1512 aaKnown RBP30.44■■■□□ 2.46
RPA2-201ENST00000313433 FHOD3Q2V2M9 1422 aa30.44■■■□□ 2.46
RPA2-201ENST00000313433 RAPGEF6Q8TEU7 1601 aa30.42■■■□□ 2.46
RPA2-201ENST00000313433 EFCAB5A4FU69 1503 aa30.42■■■□□ 2.46
RPA2-201ENST00000313433 EHMT2Q96KQ7 1210 aa30.41■■■□□ 2.46
RPA2-201ENST00000313433 MAP3K4Q9Y6R4 1608 aa30.4■■■□□ 2.46
RPA2-201ENST00000313433 RANGAP1P46060 587 aaPredicted RBP30.4■■■□□ 2.46
RPA2-201ENST00000313433 WDR7Q9Y4E6 1490 aa30.39■■■□□ 2.46
RPA2-201ENST00000313433 ATP10BO94823 1461 aa30.35■■■□□ 2.45
RPA2-201ENST00000313433 NUP153P49790 1475 aaKnown RBP30.31■■■□□ 2.44
RPA2-201ENST00000313433 UBTFP17480 764 aaKnown RBP30.29■■■□□ 2.44
RPA2-201ENST00000313433 ARHGAP35Q9NRY4 1499 aa30.28■■■□□ 2.44
RPA2-201ENST00000313433 KDM6BO15054 1643 aa30.28■■■□□ 2.44
RPA2-201ENST00000313433 ARID3CA6NKF2 412 aa30.27■■■□□ 2.44
RPA2-201ENST00000313433 CFAP43Q8NDM7 1665 aa30.23■■■□□ 2.43
RPA2-201ENST00000313433 COL17A1Q9UMD9 1497 aaPredicted RBP30.14■■■□□ 2.42
RPA2-201ENST00000313433 KCNH8Q96L42 1107 aa30.13■■■□□ 2.41
RPA2-201ENST00000313433 ABCA9Q8IUA7 1624 aa30.12■■■□□ 2.41
RPA2-201ENST00000313433 MAGI3Q5TCQ9 1506 aa30.11■■■□□ 2.41
RPA2-201ENST00000313433 TEX14Q8IWB6 1497 aa30.1■■■□□ 2.41
RPA2-201ENST00000313433 CDK13Q14004 1512 aaKnown RBP30.09■■■□□ 2.41
RPA2-201ENST00000313433 LRRIQ1Q96JM4 1722 aa30.09■■■□□ 2.41
RPA2-201ENST00000313433 CD109Q6YHK3 1445 aa30.08■■■□□ 2.41
RPA2-201ENST00000313433 FMN1Q68DA7 1419 aa30.05■■■□□ 2.4
RPA2-201ENST00000313433 HECW1Q76N89 1606 aa30.04■■■□□ 2.4
RPA2-201ENST00000313433 PCF11O94913 1555 aaKnown RBP29.98■■■□□ 2.39
RPA2-201ENST00000313433 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.97■■■□□ 2.39
RPA2-201ENST00000313433 HNRNPUL2Q1KMD3 747 aaKnown RBP29.97■■■□□ 2.39
RPA2-201ENST00000313433 TTC37Q6PGP7 1564 aa29.94■■■□□ 2.38
RPA2-201ENST00000313433 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.93■■■□□ 2.387e-7■■□□□ 14.3
RPA2-201ENST00000313433 CLIP1P30622 1438 aa29.9■■■□□ 2.38
RPA2-201ENST00000313433 PLEKHD1A6NEE1 506 aa29.86■■■□□ 2.37
RPA2-201ENST00000313433 CASKIN1Q8WXD9 1431 aa29.86■■■□□ 2.37
RPA2-201ENST00000313433 ARAP3Q8WWN8 1544 aa29.86■■■□□ 2.37
RPA2-201ENST00000313433 KIF14Q15058 1648 aa29.84■■■□□ 2.37
RPA2-201ENST00000313433 ATP1B4Q9UN42 357 aaPredicted RBP29.81■■■□□ 2.36
RPA2-201ENST00000313433 NEO1Q92859 1461 aa29.8■■■□□ 2.36
RPA2-201ENST00000313433 FRMPD1Q5SYB0 1578 aa29.8■■■□□ 2.36
RPA2-201ENST00000313433 FYCO1Q9BQS8 1478 aa29.79■■■□□ 2.36
RPA2-201ENST00000313433 CEP162Q5TB80 1403 aa29.75■■■□□ 2.35
RPA2-201ENST00000313433 TROQ12816 1431 aaPredicted RBP29.74■■■□□ 2.35
RPA2-201ENST00000313433 LOC105371045A0A1W2PR82 267 aa29.74■■■□□ 2.35
RPA2-201ENST00000313433 CCDC18Q5T9S5 1454 aa29.74■■■□□ 2.35
RPA2-201ENST00000313433 MYO5CQ9NQX4 1742 aa29.72■■■□□ 2.35
RPA2-201ENST00000313433 PHLDB1Q86UU1 1377 aa29.72■■■□□ 2.35
RPA2-201ENST00000313433 CFAP74Q9C0B2 1584 aa29.72■■■□□ 2.35
RPA2-201ENST00000313433 RICTORQ6R327 1708 aa29.71■■■□□ 2.35
RPA2-201ENST00000313433 FANCAO15360 1455 aa29.7■■■□□ 2.35
RPA2-201ENST00000313433 KDM4FA0A1W2PPD8 638 aa29.7■■■□□ 2.35
RPA2-201ENST00000313433 PLCH2O75038 1416 aa29.66■■■□□ 2.34
RPA2-201ENST00000313433 AKNAQ7Z591 1439 aa29.66■■■□□ 2.34
RPA2-201ENST00000313433 RAPGEF3O95398 923 aa29.64■■■□□ 2.34
RPA2-201ENST00000313433 ADGRL1O94910 1474 aa29.62■■■□□ 2.33
RPA2-201ENST00000313433 CDK11AQ9UQ88 783 aaPredicted RBP29.62■■■□□ 2.33
RPA2-201ENST00000313433 CDC42BPBQ9Y5S2 1711 aa29.62■■■□□ 2.33
RPA2-201ENST00000313433 AEBP2Q6ZN18 517 aaPredicted RBP29.61■■■□□ 2.33
RPA2-201ENST00000313433 PREX2Q70Z35 1606 aa29.58■■■□□ 2.33
RPA2-201ENST00000313433 DENND4BO75064 1496 aaPredicted RBP29.57■■■□□ 2.32
RPA2-201ENST00000313433 CDC42BPAQ5VT25 1732 aa29.57■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms