RNA–Protein interactions for RNA: ENST00000312349.4

FNDC9-201, Transcript of fibronectin type III domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC9, Length 2,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9-201ENST00000312349 FHOD3Q2V2M9 1422 aa17.4■□□□□ 0.38
FNDC9-201ENST00000312349 PCF11O94913 1555 aaKnown RBP17.39■□□□□ 0.37
FNDC9-201ENST00000312349 TIAM1Q13009 1591 aa17.39■□□□□ 0.37
FNDC9-201ENST00000312349 MRC2Q9UBG0 1479 aa17.37■□□□□ 0.37
FNDC9-201ENST00000312349 AQRO60306 1485 aaKnown RBP eCLIP17.35■□□□□ 0.37
FNDC9-201ENST00000312349 RRBP1Q9P2E9 1410 aaKnown RBP17.35■□□□□ 0.37
FNDC9-201ENST00000312349 PBRM1Q86U86 1689 aa17.34■□□□□ 0.37
FNDC9-201ENST00000312349 EFCAB5A4FU69 1503 aa17.32■□□□□ 0.36
FNDC9-201ENST00000312349 LRRC9Q6ZRR7 1453 aa17.31■□□□□ 0.36
FNDC9-201ENST00000312349 CFAP43Q8NDM7 1665 aa17.31■□□□□ 0.36
FNDC9-201ENST00000312349 FHAD1B1AJZ9 1412 aa17.3■□□□□ 0.36
FNDC9-201ENST00000312349 MAP3K1Q13233 1512 aa17.3■□□□□ 0.36
FNDC9-201ENST00000312349 ATP1B4Q9UN42 357 aaPredicted RBP17.29■□□□□ 0.36
FNDC9-201ENST00000312349 ZNF608Q9ULD9 1512 aaPredicted RBP17.29■□□□□ 0.36
FNDC9-201ENST00000312349 CCNB3Q8WWL7 1395 aa17.28■□□□□ 0.36
FNDC9-201ENST00000312349 SAMD9Q5K651 1589 aa17.27■□□□□ 0.35
FNDC9-201ENST00000312349 WDR62O43379 1518 aa17.27■□□□□ 0.35
FNDC9-201ENST00000312349 PHLDB1Q86UU1 1377 aa17.26■□□□□ 0.35
FNDC9-201ENST00000312349 FYCO1Q9BQS8 1478 aa17.25■□□□□ 0.35
FNDC9-201ENST00000312349 CASKIN1Q8WXD9 1431 aa17.24■□□□□ 0.35
FNDC9-201ENST00000312349 ADAMTS12P58397 1594 aa17.24■□□□□ 0.35
FNDC9-201ENST00000312349 SNAPC4Q5SXM2 1469 aa17.24■□□□□ 0.35
FNDC9-201ENST00000312349 ITGAEP38570 1179 aa17.24■□□□□ 0.35
FNDC9-201ENST00000312349 LRRIQ1Q96JM4 1722 aa17.24■□□□□ 0.35
FNDC9-201ENST00000312349 IFT140Q96RY7 1462 aa17.19■□□□□ 0.34
FNDC9-201ENST00000312349 ERCC6Q03468 1493 aa17.19■□□□□ 0.34
FNDC9-201ENST00000312349 GRIN2BQ13224 1484 aa17.19■□□□□ 0.34
FNDC9-201ENST00000312349 DHX57Q6P158 1386 aaKnown RBP17.19■□□□□ 0.34
FNDC9-201ENST00000312349 FMN1Q68DA7 1419 aa17.18■□□□□ 0.34
FNDC9-201ENST00000312349 THOC2Q8NI27 1593 aaKnown RBP17.17■□□□□ 0.34
FNDC9-201ENST00000312349 EIF4G3O43432 1585 aaKnown RBP17.16■□□□□ 0.34
FNDC9-201ENST00000312349 IQGAP2Q13576 1575 aa17.15■□□□□ 0.34
FNDC9-201ENST00000312349 FAM50AQ14320 339 aaKnown RBP17.11■□□□□ 0.33
FNDC9-201ENST00000312349 RAB3GAP2Q9H2M9 1393 aa17.07■□□□□ 0.32
FNDC9-201ENST00000312349 MAGI3Q5TCQ9 1506 aa17.07■□□□□ 0.32
FNDC9-201ENST00000312349 MTUS2Q5JR59 1369 aa17.05■□□□□ 0.32
FNDC9-201ENST00000312349 DIEXFQ68CQ4 756 aaKnown RBP17.05■□□□□ 0.32
FNDC9-201ENST00000312349 GRIN2AQ12879 1464 aa17.04■□□□□ 0.32
FNDC9-201ENST00000312349 UGGT2Q9NYU1 1516 aa17.03■□□□□ 0.32
FNDC9-201ENST00000312349 FGD6Q6ZV73 1430 aa17.02■□□□□ 0.32
FNDC9-201ENST00000312349 ZNF316A6NFI3 1004 aaPredicted RBP17.02■□□□□ 0.32
FNDC9-201ENST00000312349 ARID3CA6NKF2 412 aa17.02■□□□□ 0.32
FNDC9-201ENST00000312349 NCOA2Q15596 1464 aa17.02■□□□□ 0.31
FNDC9-201ENST00000312349 DISP1Q96F81 1524 aa17.01■□□□□ 0.31
FNDC9-201ENST00000312349 SETD5Q9C0A6 1442 aa17■□□□□ 0.31
FNDC9-201ENST00000312349 CDK13Q14004 1512 aaKnown RBP17■□□□□ 0.31
FNDC9-201ENST00000312349 CLSPNQ9HAW4 1339 aa17■□□□□ 0.31
FNDC9-201ENST00000312349 MAPKBP1O60336 1514 aa17■□□□□ 0.31
FNDC9-201ENST00000312349 KIAA0586Q9BVV6 1533 aa17■□□□□ 0.31
FNDC9-201ENST00000312349 HECW1Q76N89 1606 aa16.99■□□□□ 0.31
FNDC9-201ENST00000312349 KIAA0556O60303 1618 aa16.98■□□□□ 0.31
FNDC9-201ENST00000312349 CEP170Q5SW79 1584 aa16.98■□□□□ 0.31
FNDC9-201ENST00000312349 SUPT6HQ7KZ85 1726 aaKnown RBP16.98■□□□□ 0.31
FNDC9-201ENST00000312349 EPRSP07814 1512 aaKnown RBP16.98■□□□□ 0.31
FNDC9-201ENST00000312349 EHBP1L1Q8N3D4 1523 aa16.98■□□□□ 0.31
FNDC9-201ENST00000312349 PTPRKQ15262 1439 aa16.97■□□□□ 0.31
FNDC9-201ENST00000312349 MAGI1Q96QZ7 1491 aaPredicted RBP16.96■□□□□ 0.31
FNDC9-201ENST00000312349 CCDC18Q5T9S5 1454 aa16.95■□□□□ 0.3
FNDC9-201ENST00000312349 ARHGEF11O15085 1522 aa16.95■□□□□ 0.3
FNDC9-201ENST00000312349 FBLN2P98095 1184 aa16.94■□□□□ 0.3
FNDC9-201ENST00000312349 MYOM3Q5VTT5 1437 aa16.94■□□□□ 0.3
FNDC9-201ENST00000312349 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.94■□□□□ 0.3
FNDC9-201ENST00000312349 SYNJ2O15056 1496 aa16.94■□□□□ 0.3
FNDC9-201ENST00000312349 CHMP7Q8WUX9 453 aaPredicted RBP16.93■□□□□ 0.3
FNDC9-201ENST00000312349 PTPN23Q9H3S7 1636 aa16.9■□□□□ 0.3
FNDC9-201ENST00000312349 NUP153P49790 1475 aaKnown RBP16.89■□□□□ 0.29
FNDC9-201ENST00000312349 RAPGEF6Q8TEU7 1601 aa16.86■□□□□ 0.29
FNDC9-201ENST00000312349 NUP160Q12769 1436 aa16.86■□□□□ 0.29
FNDC9-201ENST00000312349 SIN3AQ96ST3 1273 aa16.85■□□□□ 0.29
FNDC9-201ENST00000312349 PLB1Q6P1J6 1458 aa16.84■□□□□ 0.29
FNDC9-201ENST00000312349 HFM1A2PYH4 1435 aa16.82■□□□□ 0.28
FNDC9-201ENST00000312349 NAIPQ13075 1403 aa16.81■□□□□ 0.28
FNDC9-201ENST00000312349 TCOF1Q13428 1488 aaKnown RBP16.81■□□□□ 0.28
FNDC9-201ENST00000312349 JPH4Q96JJ6 628 aa16.8■□□□□ 0.28
FNDC9-201ENST00000312349 NEUROD1Q13562 356 aa16.79■□□□□ 0.28
FNDC9-201ENST00000312349 CHIC2Q9UKJ5 165 aa16.79■□□□□ 0.28
FNDC9-201ENST00000312349 MIER1Q8N108 512 aa16.78■□□□□ 0.28
FNDC9-201ENST00000312349 KDM6BO15054 1643 aa16.76■□□□□ 0.27
FNDC9-201ENST00000312349 RRP7BPQ9NSQ0 103 aa16.76■□□□□ 0.27
FNDC9-201ENST00000312349 PRG4Q92954 1404 aaPredicted RBP16.76■□□□□ 0.27
FNDC9-201ENST00000312349 ZNF644Q9H582 1327 aaPredicted RBP16.74■□□□□ 0.27
FNDC9-201ENST00000312349 CHD1O14646 1710 aa16.73■□□□□ 0.27
FNDC9-201ENST00000312349 MIA2Q96PC5 1412 aa16.73■□□□□ 0.27
FNDC9-201ENST00000312349 KIF14Q15058 1648 aa16.73■□□□□ 0.27
FNDC9-201ENST00000312349 CARMIL2Q6F5E8 1435 aa16.72■□□□□ 0.27
FNDC9-201ENST00000312349 UACAQ9BZF9 1416 aa16.72■□□□□ 0.27
FNDC9-201ENST00000312349 GCC2Q8IWJ2 1684 aa16.72■□□□□ 0.27
FNDC9-201ENST00000312349 SCAF1Q9H7N4 1312 aaKnown RBP16.69■□□□□ 0.26
FNDC9-201ENST00000312349 TROQ12816 1431 aaPredicted RBP16.69■□□□□ 0.26
FNDC9-201ENST00000312349 ABCA8O94911 1581 aa16.68■□□□□ 0.26
FNDC9-201ENST00000312349 DENND4BO75064 1496 aaPredicted RBP16.68■□□□□ 0.26
FNDC9-201ENST00000312349 DAPK1P53355 1430 aa16.66■□□□□ 0.26
FNDC9-201ENST00000312349 PHF23Q9BUL5 403 aaPredicted RBP16.66■□□□□ 0.26
FNDC9-201ENST00000312349 DNMT1P26358 1616 aaKnown RBP16.66■□□□□ 0.26
FNDC9-201ENST00000312349 ABCC5O15440 1437 aa16.65■□□□□ 0.26
FNDC9-201ENST00000312349 CDK11AQ9UQ88 783 aaPredicted RBP16.65■□□□□ 0.26
FNDC9-201ENST00000312349 ADCY10Q96PN6 1610 aa16.65■□□□□ 0.26
FNDC9-201ENST00000312349 YTHDC1Q96MU7 727 aaKnown RBP16.64■□□□□ 0.25
FNDC9-201ENST00000312349 ATP10BO94823 1461 aa16.63■□□□□ 0.25
FNDC9-201ENST00000312349 GPATCH8Q9UKJ3 1502 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms