RNA–Protein interactions for RNA: ENST00000311034.6

NPAS4-201, Transcript of neuronal PAS domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS4, Length 3,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4-201ENST00000311034 TOP2BQ02880 1626 aa19.1■□□□□ 0.65
NPAS4-201ENST00000311034 RRBP1Q9P2E9 1410 aaKnown RBP19.09■□□□□ 0.65
NPAS4-201ENST00000311034 RBM19Q9Y4C8 960 aaKnown RBP19.09■□□□□ 0.65
NPAS4-201ENST00000311034 BCL11AQ9H165 835 aa19.08■□□□□ 0.64
NPAS4-201ENST00000311034 KIF27Q86VH2 1401 aa19.07■□□□□ 0.64
NPAS4-201ENST00000311034 ZNF326Q5BKZ1 582 aaKnown RBP19.04■□□□□ 0.64
NPAS4-201ENST00000311034 ERICH6Q7L0X2 663 aa19.02■□□□□ 0.64
NPAS4-201ENST00000311034 SETD5Q9C0A6 1442 aa19.01■□□□□ 0.63
NPAS4-201ENST00000311034 ARHGAP35Q9NRY4 1499 aa19.01■□□□□ 0.63
NPAS4-201ENST00000311034 ERICH3Q5RHP9 1530 aa19.01■□□□□ 0.63
NPAS4-201ENST00000311034 WDR97A6NE52 1622 aa19■□□□□ 0.63
NPAS4-201ENST00000311034 HNRNPUQ00839 825 aaKnown RBP eCLIP18.99■□□□□ 0.63
NPAS4-201ENST00000311034 CUX1P39880 1505 aa18.98■□□□□ 0.63
NPAS4-201ENST00000311034 PPP1R15AO75807 674 aaPredicted RBP18.95■□□□□ 0.62
NPAS4-201ENST00000311034 MAPKBP1O60336 1514 aa18.95■□□□□ 0.62
NPAS4-201ENST00000311034 PHLDB1Q86UU1 1377 aa18.94■□□□□ 0.62
NPAS4-201ENST00000311034 TONSLQ96HA7 1378 aa18.93■□□□□ 0.62
NPAS4-201ENST00000311034 BIVM-ERCC5R4GMW8 1640 aa18.92■□□□□ 0.62
NPAS4-201ENST00000311034 RRP7BPQ9NSQ0 103 aa18.91■□□□□ 0.62
NPAS4-201ENST00000311034 FAM9BQ8IZU0 186 aa18.91■□□□□ 0.62
NPAS4-201ENST00000311034 CUX2O14529 1486 aa18.9■□□□□ 0.62
NPAS4-201ENST00000311034 CDK11AQ9UQ88 783 aaPredicted RBP18.87■□□□□ 0.61
NPAS4-201ENST00000311034 IGF1RP08069 1367 aa18.86■□□□□ 0.61
NPAS4-201ENST00000311034 SALL2Q9Y467 1007 aaPredicted RBP18.86■□□□□ 0.61
NPAS4-201ENST00000311034 FOXD1Q16676 465 aa18.86■□□□□ 0.61
NPAS4-201ENST00000311034 CCER2I3L3R5 266 aa18.85■□□□□ 0.61
NPAS4-201ENST00000311034 CARMIL1Q5VZK9 1371 aa18.85■□□□□ 0.61
NPAS4-201ENST00000311034 MSH5O43196 834 aa18.82■□□□□ 0.6
NPAS4-201ENST00000311034 LRRC9Q6ZRR7 1453 aa18.81■□□□□ 0.6
NPAS4-201ENST00000311034 TIAM1Q13009 1591 aa18.79■□□□□ 0.6
NPAS4-201ENST00000311034 NCAPD3P42695 1498 aa18.78■□□□□ 0.6
NPAS4-201ENST00000311034 FHOD3Q2V2M9 1422 aa18.77■□□□□ 0.6
NPAS4-201ENST00000311034 CFTRP13569 1480 aa18.77■□□□□ 0.59
NPAS4-201ENST00000311034 ZNF777Q9ULD5 760 aaPredicted RBP18.76■□□□□ 0.59
NPAS4-201ENST00000311034 FBLN2P98095 1184 aa18.75■□□□□ 0.59
NPAS4-201ENST00000311034 TIMELESSQ9UNS1 1208 aa18.72■□□□□ 0.59
NPAS4-201ENST00000311034 B4GALNT3Q6L9W6 998 aa18.71■□□□□ 0.59
NPAS4-201ENST00000311034 FHAD1B1AJZ9 1412 aa18.7■□□□□ 0.58
NPAS4-201ENST00000311034 MTUS2Q5JR59 1369 aa18.69■□□□□ 0.58
NPAS4-201ENST00000311034 HSPA5P11021 654 aaKnown RBP18.67■□□□□ 0.58
NPAS4-201ENST00000311034 HMGXB3Q12766 1538 aa18.67■□□□□ 0.58
NPAS4-201ENST00000311034 FGD5Q6ZNL6 1462 aa18.67■□□□□ 0.58
NPAS4-201ENST00000311034 CCDC184Q52MB2 194 aa18.66■□□□□ 0.58
NPAS4-201ENST00000311034 MRS2Q9HD23 443 aa18.64■□□□□ 0.58
NPAS4-201ENST00000311034 NBR1Q14596 966 aa18.64■□□□□ 0.57
NPAS4-201ENST00000311034 CCDC18Q5T9S5 1454 aa18.63■□□□□ 0.57
NPAS4-201ENST00000311034 PCF11O94913 1555 aaKnown RBP18.63■□□□□ 0.57
NPAS4-201ENST00000311034 CADPSQ9ULU8 1353 aa18.62■□□□□ 0.57
NPAS4-201ENST00000311034 WASHC2AQ641Q2 1341 aa18.6■□□□□ 0.57
NPAS4-201ENST00000311034 EIF4G2P78344 907 aaKnown RBP eCLIP18.59■□□□□ 0.57
NPAS4-201ENST00000311034 KDM2AQ9Y2K7 1162 aa18.59■□□□□ 0.57
NPAS4-201ENST00000311034 PPP4R2Q9NY27 417 aa18.59■□□□□ 0.57
NPAS4-201ENST00000311034 MAP3K1Q13233 1512 aa18.57■□□□□ 0.56
NPAS4-201ENST00000311034 RAD54L2Q9Y4B4 1467 aa18.57■□□□□ 0.56
NPAS4-201ENST00000311034 NPM2Q86SE8 214 aaKnown RBP18.57■□□□□ 0.56
NPAS4-201ENST00000311034 FANCIQ9NVI1 1328 aa18.56■□□□□ 0.56
NPAS4-201ENST00000311034 FGD6Q6ZV73 1430 aa18.55■□□□□ 0.56
NPAS4-201ENST00000311034 PTPRKQ15262 1439 aa18.53■□□□□ 0.56
NPAS4-201ENST00000311034 UACAQ9BZF9 1416 aa18.51■□□□□ 0.55
NPAS4-201ENST00000311034 DEKP35659 375 aaKnown RBP18.49■□□□□ 0.55
NPAS4-201ENST00000311034 AQRO60306 1485 aaKnown RBP eCLIP18.49■□□□□ 0.55
NPAS4-201ENST00000311034 L3MBTL2Q969R5 705 aa18.49■□□□□ 0.55
NPAS4-201ENST00000311034 C11orf95C9JLR9 678 aaPredicted RBP18.48■□□□□ 0.55
NPAS4-201ENST00000311034 SENP3Q9H4L4 574 aaPredicted RBP18.48■□□□□ 0.55
NPAS4-201ENST00000311034 TDRD9Q8NDG6 1382 aaKnown RBP18.48■□□□□ 0.55
NPAS4-201ENST00000311034 CASKIN1Q8WXD9 1431 aa18.46■□□□□ 0.55
NPAS4-201ENST00000311034 PRKRIP1Q9H875 184 aaPredicted RBP18.46■□□□□ 0.55
NPAS4-201ENST00000311034 DNAJC5BQ9UF47 199 aa18.46■□□□□ 0.55
NPAS4-201ENST00000311034 FANCD2Q9BXW9 1451 aa18.45■□□□□ 0.54
NPAS4-201ENST00000311034 FYCO1Q9BQS8 1478 aa18.44■□□□□ 0.54
NPAS4-201ENST00000311034 HFM1A2PYH4 1435 aa18.43■□□□□ 0.54
NPAS4-201ENST00000311034 NAIPQ13075 1403 aa18.43■□□□□ 0.54
NPAS4-201ENST00000311034 FMN1Q68DA7 1419 aa18.43■□□□□ 0.54
NPAS4-201ENST00000311034 CFAP43Q8NDM7 1665 aa18.43■□□□□ 0.54
NPAS4-201ENST00000311034 CCDC136Q96JN2 1154 aa18.43■□□□□ 0.54
NPAS4-201ENST00000311034 SLC4A1APQ9BWU0 796 aaKnown RBP18.42■□□□□ 0.54
NPAS4-201ENST00000311034 MPHOSPH9Q99550 1183 aa18.42■□□□□ 0.54
NPAS4-201ENST00000311034 NOP58Q9Y2X3 529 aaKnown RBP18.42■□□□□ 0.54
NPAS4-201ENST00000311034 PAK3O75914 559 aaPredicted RBP18.41■□□□□ 0.54
NPAS4-201ENST00000311034 NCOA2Q15596 1464 aa18.39■□□□□ 0.53
NPAS4-201ENST00000311034 PTPN23Q9H3S7 1636 aa18.39■□□□□ 0.53
NPAS4-201ENST00000311034 RGL3Q3MIN7 710 aa18.38■□□□□ 0.53
NPAS4-201ENST00000311034 CNTLNQ9NXG0 1405 aa18.38■□□□□ 0.53
NPAS4-201ENST00000311034 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.37■□□□□ 0.53
NPAS4-201ENST00000311034 MYT1LQ9UL68 1186 aa18.37■□□□□ 0.53
NPAS4-201ENST00000311034 MYOM3Q5VTT5 1437 aa18.37■□□□□ 0.53
NPAS4-201ENST00000311034 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.36■□□□□ 0.53
NPAS4-201ENST00000311034 POLA1P09884 1462 aaPredicted RBP18.36■□□□□ 0.53
NPAS4-201ENST00000311034 ANP32AP39687 249 aaKnown RBP18.36■□□□□ 0.53
NPAS4-201ENST00000311034 RTL5Q5HYW3 569 aaPredicted RBP18.36■□□□□ 0.53
NPAS4-201ENST00000311034 NBPF8Q3BBV2 869 aa18.35■□□□□ 0.53
NPAS4-201ENST00000311034 CCDC7Q96M83 1385 aa18.35■□□□□ 0.53
NPAS4-201ENST00000311034 NESP48681 1621 aa18.35■□□□□ 0.53
NPAS4-201ENST00000311034 ZBED9Q6R2W3 1325 aa18.35■□□□□ 0.53
NPAS4-201ENST00000311034 ERICH6BQ5W0A0 696 aa18.34■□□□□ 0.53
NPAS4-201ENST00000311034 AKNAQ7Z591 1439 aa18.34■□□□□ 0.53
NPAS4-201ENST00000311034 KIF7Q2M1P5 1343 aa18.32■□□□□ 0.52
NPAS4-201ENST00000311034 EFCAB5A4FU69 1503 aa18.31■□□□□ 0.52
NPAS4-201ENST00000311034 TOPBP1Q92547 1522 aa18.31■□□□□ 0.52
NPAS4-201ENST00000311034 ZNF644Q9H582 1327 aaPredicted RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms