RNA–Protein interactions for RNA: ENST00000310574.7

SLC5A6-201, Transcript of solute carrier family 5 member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC5A6, Length 3,231 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC5A6-201ENST00000310574 TRIM52Q96A61 297 aa16.48■□□□□ 0.23
SLC5A6-201ENST00000310574 IRX6P78412 446 aaPredicted RBP16.47■□□□□ 0.23
SLC5A6-201ENST00000310574 TOP2BQ02880 1626 aa16.45■□□□□ 0.22
SLC5A6-201ENST00000310574 KANK4Q5T7N3 995 aaPredicted RBP16.44■□□□□ 0.22
SLC5A6-201ENST00000310574 PKNOX2Q96KN3 472 aa16.41■□□□□ 0.22
SLC5A6-201ENST00000310574 ERICH3Q5RHP9 1530 aa16.41■□□□□ 0.22
SLC5A6-201ENST00000310574 RTL5Q5HYW3 569 aaPredicted RBP16.41■□□□□ 0.22
SLC5A6-201ENST00000310574 ARAP1Q96P48 1450 aa16.39■□□□□ 0.21
SLC5A6-201ENST00000310574 PRXQ9BXM0 1461 aa16.39■□□□□ 0.21
SLC5A6-201ENST00000310574 PAK3O75914 559 aaPredicted RBP16.36■□□□□ 0.21
SLC5A6-201ENST00000310574 NOP58Q9Y2X3 529 aaKnown RBP16.36■□□□□ 0.21
SLC5A6-201ENST00000310574 KIF27Q86VH2 1401 aa16.35■□□□□ 0.21
SLC5A6-201ENST00000310574 BIVM-ERCC5R4GMW8 1640 aa16.34■□□□□ 0.21
SLC5A6-201ENST00000310574 CCNB3Q8WWL7 1395 aa16.34■□□□□ 0.21
SLC5A6-201ENST00000310574 RRBP1Q9P2E9 1410 aaKnown RBP16.33■□□□□ 0.21
SLC5A6-201ENST00000310574 PLEKHG5O94827 1062 aa16.33■□□□□ 0.2
SLC5A6-201ENST00000310574 DDX10Q13206 875 aaKnown RBP16.26■□□□□ 0.19
SLC5A6-201ENST00000310574 TIMELESSQ9UNS1 1208 aa16.25■□□□□ 0.19
SLC5A6-201ENST00000310574 CUX1P39880 1505 aa16.24■□□□□ 0.19
SLC5A6-201ENST00000310574 CUX2O14529 1486 aa16.23■□□□□ 0.19
SLC5A6-201ENST00000310574 ARHGAP35Q9NRY4 1499 aa16.23■□□□□ 0.19
SLC5A6-201ENST00000310574 RAB3GAP2Q9H2M9 1393 aa16.21■□□□□ 0.19
SLC5A6-201ENST00000310574 NCAPD3P42695 1498 aa16.18■□□□□ 0.18
SLC5A6-201ENST00000310574 FAM50AQ14320 339 aaKnown RBP16.17■□□□□ 0.18
SLC5A6-201ENST00000310574 HMGXB3Q12766 1538 aa16.16■□□□□ 0.18
SLC5A6-201ENST00000310574 PODXL2Q9NZ53 605 aa16.15■□□□□ 0.18
SLC5A6-201ENST00000310574 ATP1B4Q9UN42 357 aaPredicted RBP16.15■□□□□ 0.18
SLC5A6-201ENST00000310574 B4GALNT3Q6L9W6 998 aa16.15■□□□□ 0.18
SLC5A6-201ENST00000310574 SETD5Q9C0A6 1442 aa16.14■□□□□ 0.18
SLC5A6-201ENST00000310574 CFTRP13569 1480 aa16.13■□□□□ 0.17
SLC5A6-201ENST00000310574 BRPF3Q9ULD4 1205 aa16.13■□□□□ 0.17
SLC5A6-201ENST00000310574 ZBTB47Q9UFB7 747 aaPredicted RBP16.11■□□□□ 0.17
SLC5A6-201ENST00000310574 HIRIP3Q9BW71 556 aaPredicted RBP16.11■□□□□ 0.17
SLC5A6-201ENST00000310574 IGF1RP08069 1367 aa16.1■□□□□ 0.17
SLC5A6-201ENST00000310574 SIN3AQ96ST3 1273 aa16.1■□□□□ 0.17
SLC5A6-201ENST00000310574 ANP32AP39687 249 aaKnown RBP16.09■□□□□ 0.17
SLC5A6-201ENST00000310574 CARMIL1Q5VZK9 1371 aa16.09■□□□□ 0.17
SLC5A6-201ENST00000310574 TIAM1Q13009 1591 aa16.09■□□□□ 0.17
SLC5A6-201ENST00000310574 MAPKBP1O60336 1514 aa16.08■□□□□ 0.17
SLC5A6-201ENST00000310574 LAS1LQ9Y4W2 734 aaKnown RBP16.08■□□□□ 0.17
SLC5A6-201ENST00000310574 SLC24A1O60721 1099 aa16.07■□□□□ 0.16
SLC5A6-201ENST00000310574 HNRNPUQ00839 825 aaKnown RBP eCLIP16.07■□□□□ 0.16
SLC5A6-201ENST00000310574 P3H3Q8IVL6 736 aa16.07■□□□□ 0.16
SLC5A6-201ENST00000310574 MAP3K1Q13233 1512 aa16.07■□□□□ 0.16
SLC5A6-201ENST00000310574 LRRC9Q6ZRR7 1453 aa16.07■□□□□ 0.16
SLC5A6-201ENST00000310574 FHAD1B1AJZ9 1412 aa16.06■□□□□ 0.16
SLC5A6-201ENST00000310574 VSIG10Q8N0Z9 540 aa16.06■□□□□ 0.16
SLC5A6-201ENST00000310574 NEFMP07197 916 aa16.05■□□□□ 0.16
SLC5A6-201ENST00000310574 PHLDB1Q86UU1 1377 aa16.05■□□□□ 0.16
SLC5A6-201ENST00000310574 ANP32CO43423 234 aa16.04■□□□□ 0.16
SLC5A6-201ENST00000310574 PPP4R2Q9NY27 417 aa16.04■□□□□ 0.16
SLC5A6-201ENST00000310574 IPO9Q96P70 1041 aaKnown RBP16.03■□□□□ 0.16
SLC5A6-201ENST00000310574 NPM2Q86SE8 214 aaKnown RBP16.02■□□□□ 0.16
SLC5A6-201ENST00000310574 WDR97A6NE52 1622 aa16.02■□□□□ 0.15
SLC5A6-201ENST00000310574 ZMYND15Q9H091 742 aa16■□□□□ 0.15
SLC5A6-201ENST00000310574 PPP1R15AO75807 674 aaPredicted RBP15.98■□□□□ 0.15
SLC5A6-201ENST00000310574 GLIPR1L2Q4G1C9 344 aa15.97■□□□□ 0.15
SLC5A6-201ENST00000310574 FGD5Q6ZNL6 1462 aa15.97■□□□□ 0.15
SLC5A6-201ENST00000310574 CCER2I3L3R5 266 aa15.96■□□□□ 0.15
SLC5A6-201ENST00000310574 CADPSQ9ULU8 1353 aa15.96■□□□□ 0.15
SLC5A6-201ENST00000310574 TONSLQ96HA7 1378 aa15.95■□□□□ 0.14
SLC5A6-201ENST00000310574 FHOD3Q2V2M9 1422 aa15.91■□□□□ 0.14
SLC5A6-201ENST00000310574 WASHC2AQ641Q2 1341 aa15.91■□□□□ 0.14
SLC5A6-201ENST00000310574 PCF11O94913 1555 aaKnown RBP15.91■□□□□ 0.14
SLC5A6-201ENST00000310574 PRDM2Q13029 1718 aa15.9■□□□□ 0.14
SLC5A6-201ENST00000310574 RSPH6AQ9H0K4 717 aa15.89■□□□□ 0.13
SLC5A6-201ENST00000310574 CFAP43Q8NDM7 1665 aa15.88■□□□□ 0.13
SLC5A6-201ENST00000310574 C11orf95C9JLR9 678 aaPredicted RBP15.88■□□□□ 0.13
SLC5A6-201ENST00000310574 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.87■□□□□ 0.13
SLC5A6-201ENST00000310574 A0A0U1RQG5 324 aaPredicted RBP15.87■□□□□ 0.13
SLC5A6-201ENST00000310574 FYCO1Q9BQS8 1478 aa15.86■□□□□ 0.13
SLC5A6-201ENST00000310574 MTUS2Q5JR59 1369 aa15.85■□□□□ 0.13
SLC5A6-201ENST00000310574 CASKIN1Q8WXD9 1431 aa15.85■□□□□ 0.13
SLC5A6-201ENST00000310574 WASHC2CQ9Y4E1 1318 aa15.83■□□□□ 0.13
SLC5A6-201ENST00000310574 FGD6Q6ZV73 1430 aa15.82■□□□□ 0.12
SLC5A6-201ENST00000310574 EFCAB5A4FU69 1503 aa15.82■□□□□ 0.12
SLC5A6-201ENST00000310574 CCDC18Q5T9S5 1454 aa15.82■□□□□ 0.12
SLC5A6-201ENST00000310574 FMN1Q68DA7 1419 aa15.82■□□□□ 0.12
SLC5A6-201ENST00000310574 GSE1Q14687 1217 aa15.81■□□□□ 0.12
SLC5A6-201ENST00000310574 FANCD2Q9BXW9 1451 aa15.8■□□□□ 0.12
SLC5A6-201ENST00000310574 DAXXQ9UER7 740 aaPredicted RBP15.8■□□□□ 0.12
SLC5A6-201ENST00000310574 AQRO60306 1485 aaKnown RBP eCLIP15.8■□□□□ 0.122e-6■■■■□ 25.7
SLC5A6-201ENST00000310574 UACAQ9BZF9 1416 aa15.79■□□□□ 0.12
SLC5A6-201ENST00000310574 RAD54L2Q9Y4B4 1467 aa15.79■□□□□ 0.12
SLC5A6-201ENST00000310574 USP35Q9P2H5 1018 aa15.78■□□□□ 0.12
SLC5A6-201ENST00000310574 FRAT1Q92837 279 aaPredicted RBP15.77■□□□□ 0.11
SLC5A6-201ENST00000310574 HFM1A2PYH4 1435 aa15.76■□□□□ 0.11
SLC5A6-201ENST00000310574 ABCA10Q8WWZ4 1543 aa15.74■□□□□ 0.11
SLC5A6-201ENST00000310574 FAM9BQ8IZU0 186 aa15.73■□□□□ 0.11
SLC5A6-201ENST00000310574 PPM1GO15355 546 aaPredicted RBP15.72■□□□□ 0.11
SLC5A6-201ENST00000310574 POLA1P09884 1462 aaPredicted RBP15.72■□□□□ 0.11
SLC5A6-201ENST00000310574 DNMBPQ6XZF7 1577 aa15.71■□□□□ 0.11
SLC5A6-201ENST00000310574 PTPRKQ15262 1439 aa15.71■□□□□ 0.1
SLC5A6-201ENST00000310574 CC2D2AQ9P2K1 1620 aa15.7■□□□□ 0.1
SLC5A6-201ENST00000310574 CUL7Q14999 1698 aa15.7■□□□□ 0.1
SLC5A6-201ENST00000310574 PTPN23Q9H3S7 1636 aa15.7■□□□□ 0.1
SLC5A6-201ENST00000310574 RRP7BPQ9NSQ0 103 aa15.7■□□□□ 0.1
SLC5A6-201ENST00000310574 NAIPQ13075 1403 aa15.7■□□□□ 0.1
SLC5A6-201ENST00000310574 MYOM3Q5VTT5 1437 aa15.7■□□□□ 0.1
SLC5A6-201ENST00000310574 TOPBP1Q92547 1522 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms