RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 WDR62O43379 1518 aa15.57■□□□□ 0.08
APOBEC3F-201ENST00000308521 CCER1Q8TC90 406 aaPredicted RBP15.56■□□□□ 0.08
APOBEC3F-201ENST00000308521 ABCA5Q8WWZ7 1642 aa15.56■□□□□ 0.08
APOBEC3F-201ENST00000308521 VPS8Q8N3P4 1428 aa15.55■□□□□ 0.08
APOBEC3F-201ENST00000308521 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.54■□□□□ 0.08
APOBEC3F-201ENST00000308521 ARAP1Q96P48 1450 aa15.54■□□□□ 0.08
APOBEC3F-201ENST00000308521 APLP2Q06481 763 aa15.53■□□□□ 0.08
APOBEC3F-201ENST00000308521 ARHGAP35Q9NRY4 1499 aa15.52■□□□□ 0.08
APOBEC3F-201ENST00000308521 THOC2Q8NI27 1593 aaKnown RBP15.51■□□□□ 0.07
APOBEC3F-201ENST00000308521 IFT140Q96RY7 1462 aa15.51■□□□□ 0.07
APOBEC3F-201ENST00000308521 CUL7Q14999 1698 aa15.49■□□□□ 0.07
APOBEC3F-201ENST00000308521 ATP1B4Q9UN42 357 aaPredicted RBP15.47■□□□□ 0.07
APOBEC3F-201ENST00000308521 NEUROD1Q13562 356 aa15.46■□□□□ 0.07
APOBEC3F-201ENST00000308521 FBLN2P98095 1184 aa15.46■□□□□ 0.07
APOBEC3F-201ENST00000308521 DIEXFQ68CQ4 756 aaKnown RBP15.46■□□□□ 0.07
APOBEC3F-201ENST00000308521 CENPBP07199 599 aaPredicted RBP15.45■□□□□ 0.06
APOBEC3F-201ENST00000308521 GRIN2BQ13224 1484 aa15.45■□□□□ 0.06
APOBEC3F-201ENST00000308521 KANK4Q5T7N3 995 aaPredicted RBP15.44■□□□□ 0.06
APOBEC3F-201ENST00000308521 PBRM1Q86U86 1689 aa15.44■□□□□ 0.06
APOBEC3F-201ENST00000308521 FHOD3Q2V2M9 1422 aa15.42■□□□□ 0.06
APOBEC3F-201ENST00000308521 FHAD1B1AJZ9 1412 aa15.42■□□□□ 0.06
APOBEC3F-201ENST00000308521 EIF4G3O43432 1585 aaKnown RBP15.4■□□□□ 0.06
APOBEC3F-201ENST00000308521 SNAPC4Q5SXM2 1469 aa15.4■□□□□ 0.06
APOBEC3F-201ENST00000308521 CHMP7Q8WUX9 453 aaPredicted RBP15.38■□□□□ 0.05
APOBEC3F-201ENST00000308521 ADAMTS12P58397 1594 aa15.37■□□□□ 0.05
APOBEC3F-201ENST00000308521 CTTNBP2Q8WZ74 1663 aa15.36■□□□□ 0.05
APOBEC3F-201ENST00000308521 GTF3C3Q9Y5Q9 886 aa15.34■□□□□ 0.05
APOBEC3F-201ENST00000308521 HNRNPUL2Q1KMD3 747 aaKnown RBP15.32■□□□□ 0.04
APOBEC3F-201ENST00000308521 ZNF316A6NFI3 1004 aaPredicted RBP15.3■□□□□ 0.04
APOBEC3F-201ENST00000308521 GRIN2AQ12879 1464 aa15.28■□□□□ 0.04
APOBEC3F-201ENST00000308521 ARID3CA6NKF2 412 aa15.28■□□□□ 0.04
APOBEC3F-201ENST00000308521 EFCAB5A4FU69 1503 aa15.26■□□□□ 0.03
APOBEC3F-201ENST00000308521 PCF11O94913 1555 aaKnown RBP15.26■□□□□ 0.03
APOBEC3F-201ENST00000308521 MAGI1Q96QZ7 1491 aaPredicted RBP15.25■□□□□ 0.03
APOBEC3F-201ENST00000308521 IQGAP2Q13576 1575 aa15.25■□□□□ 0.03
APOBEC3F-201ENST00000308521 SYNJ2O15056 1496 aa15.24■□□□□ 0.03
APOBEC3F-201ENST00000308521 SAMD9Q5K651 1589 aa15.22■□□□□ 0.03
APOBEC3F-201ENST00000308521 FMN1Q68DA7 1419 aa15.22■□□□□ 0.03
APOBEC3F-201ENST00000308521 KIAA0586Q9BVV6 1533 aa15.21■□□□□ 0.03
APOBEC3F-201ENST00000308521 ITGAEP38570 1179 aa15.2■□□□□ 0.02
APOBEC3F-201ENST00000308521 CASKIN1Q8WXD9 1431 aa15.2■□□□□ 0.02
APOBEC3F-201ENST00000308521 TIAM1Q13009 1591 aa15.2■□□□□ 0.02
APOBEC3F-201ENST00000308521 CEP170Q5SW79 1584 aa15.19■□□□□ 0.02
APOBEC3F-201ENST00000308521 JPH4Q96JJ6 628 aa15.19■□□□□ 0.02
APOBEC3F-201ENST00000308521 LRRC9Q6ZRR7 1453 aa15.17■□□□□ 0.02
APOBEC3F-201ENST00000308521 FYCO1Q9BQS8 1478 aa15.16■□□□□ 0.02
APOBEC3F-201ENST00000308521 DISP1Q96F81 1524 aa15.14■□□□□ 0.01
APOBEC3F-201ENST00000308521 UGGT2Q9NYU1 1516 aa15.14■□□□□ 0.01
APOBEC3F-201ENST00000308521 PHLDB1Q86UU1 1377 aa15.13■□□□□ 0.01
APOBEC3F-201ENST00000308521 NUP160Q12769 1436 aa15.13■□□□□ 0.01
APOBEC3F-201ENST00000308521 FAM50AQ14320 339 aaKnown RBP15.11■□□□□ 0.01
APOBEC3F-201ENST00000308521 MTUS2Q5JR59 1369 aa15.11■□□□□ 0.01
APOBEC3F-201ENST00000308521 BCL11AQ9H165 835 aa15.11■□□□□ 0.01
APOBEC3F-201ENST00000308521 MAP3K1Q13233 1512 aa15.11■□□□□ 0.01
APOBEC3F-201ENST00000308521 CCNB3Q8WWL7 1395 aa15.1■□□□□ 0.01
APOBEC3F-201ENST00000308521 LRRIQ1Q96JM4 1722 aa15.09■□□□□ 0.01
APOBEC3F-201ENST00000308521 KIAA0556O60303 1618 aa15.09■□□□□ 0.01
APOBEC3F-201ENST00000308521 CFAP43Q8NDM7 1665 aa15.07■□□□□ 0
APOBEC3F-201ENST00000308521 RRBP1Q9P2E9 1410 aaKnown RBP15.07■□□□□ 0
APOBEC3F-201ENST00000308521 CDK13Q14004 1512 aaKnown RBP15.06■□□□□ 0
APOBEC3F-201ENST00000308521 MIER1Q8N108 512 aa15.06■□□□□ 0
APOBEC3F-201ENST00000308521 CHD1O14646 1710 aa15.06■□□□□ 0
APOBEC3F-201ENST00000308521 PLB1Q6P1J6 1458 aa15.04■□□□□ -0
APOBEC3F-201ENST00000308521 CARMIL2Q6F5E8 1435 aa15.03■□□□□ -0
APOBEC3F-201ENST00000308521 EPRSP07814 1512 aaKnown RBP15.03■□□□□ -0
APOBEC3F-201ENST00000308521 PRG4Q92954 1404 aaPredicted RBP15.03■□□□□ -0
APOBEC3F-201ENST00000308521 MAGI3Q5TCQ9 1506 aa15.02■□□□□ -0
APOBEC3F-201ENST00000308521 ADRA2BP18089 450 aa15.01□□□□□ -0.01
APOBEC3F-201ENST00000308521 CLSPNQ9HAW4 1339 aa15.01□□□□□ -0.01
APOBEC3F-201ENST00000308521 YTHDC1Q96MU7 727 aaKnown RBP15□□□□□ -0.01
APOBEC3F-201ENST00000308521 HECW1Q76N89 1606 aa15□□□□□ -0.01
APOBEC3F-201ENST00000308521 NUP153P49790 1475 aaKnown RBP14.99□□□□□ -0.01
APOBEC3F-201ENST00000308521 FOXD1Q16676 465 aa14.98□□□□□ -0.01
APOBEC3F-201ENST00000308521 NCOA2Q15596 1464 aa14.98□□□□□ -0.01
APOBEC3F-201ENST00000308521 CCDC18Q5T9S5 1454 aa14.97□□□□□ -0.01
APOBEC3F-201ENST00000308521 RAPGEF6Q8TEU7 1601 aa14.96□□□□□ -0.02
APOBEC3F-201ENST00000308521 PTPRGP23470 1445 aa14.95□□□□□ -0.02
APOBEC3F-201ENST00000308521 PPP6R1Q9UPN7 881 aa14.95□□□□□ -0.02
APOBEC3F-201ENST00000308521 ERCC6L2Q5T890 1561 aa14.94□□□□□ -0.02
APOBEC3F-201ENST00000308521 FGD6Q6ZV73 1430 aa14.94□□□□□ -0.02
APOBEC3F-201ENST00000308521 EHBP1L1Q8N3D4 1523 aa14.93□□□□□ -0.02
APOBEC3F-201ENST00000308521 ERICH6Q7L0X2 663 aa14.92□□□□□ -0.02
APOBEC3F-201ENST00000308521 ANP32EQ9BTT0 268 aa14.92□□□□□ -0.02
APOBEC3F-201ENST00000308521 CDK11AQ9UQ88 783 aaPredicted RBP14.92□□□□□ -0.02
APOBEC3F-201ENST00000308521 MYOM3Q5VTT5 1437 aa14.91□□□□□ -0.02
APOBEC3F-201ENST00000308521 SUPT6HQ7KZ85 1726 aaKnown RBP14.91□□□□□ -0.02
APOBEC3F-201ENST00000308521 CHIC2Q9UKJ5 165 aa14.89□□□□□ -0.03
APOBEC3F-201ENST00000308521 DHX57Q6P158 1386 aaKnown RBP14.88□□□□□ -0.03
APOBEC3F-201ENST00000308521 RAB3GAP2Q9H2M9 1393 aa14.88□□□□□ -0.03
APOBEC3F-201ENST00000308521 ZNF644Q9H582 1327 aaPredicted RBP14.87□□□□□ -0.03
APOBEC3F-201ENST00000308521 PLEKHD1A6NEE1 506 aa14.87□□□□□ -0.03
APOBEC3F-201ENST00000308521 PTPRKQ15262 1439 aa14.86□□□□□ -0.03
APOBEC3F-201ENST00000308521 PRKCSHP14314 528 aaPredicted RBP14.86□□□□□ -0.03
APOBEC3F-201ENST00000308521 ATP10BO94823 1461 aa14.86□□□□□ -0.03
APOBEC3F-201ENST00000308521 ZNF777Q9ULD5 760 aaPredicted RBP14.85□□□□□ -0.03
APOBEC3F-201ENST00000308521 ABCA8O94911 1581 aa14.85□□□□□ -0.03
APOBEC3F-201ENST00000308521 ARHGEF11O15085 1522 aa14.84□□□□□ -0.03
APOBEC3F-201ENST00000308521 SETD5Q9C0A6 1442 aa14.83□□□□□ -0.04
APOBEC3F-201ENST00000308521 SHROOM2Q13796 1616 aa14.83□□□□□ -0.04
APOBEC3F-201ENST00000308521 RRP7BPQ9NSQ0 103 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms