RNA–Protein interactions for RNA: ENST00000306793.4

GFRA2-201, Transcript of GDNF family receptor alpha 2, humanhuman

TSL 5

Gene GFRA2, Length 3,558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA2-201ENST00000306793 CADPSQ9ULU8 1353 aa17.18■□□□□ 0.34
GFRA2-201ENST00000306793 TOP2BQ02880 1626 aa17.17■□□□□ 0.34
GFRA2-201ENST00000306793 ZNF326Q5BKZ1 582 aaKnown RBP17.17■□□□□ 0.34
GFRA2-201ENST00000306793 FOXD1Q16676 465 aa17.17■□□□□ 0.34
GFRA2-201ENST00000306793 FGD5Q6ZNL6 1462 aa17.16■□□□□ 0.34
GFRA2-201ENST00000306793 ARHGAP35Q9NRY4 1499 aa17.15■□□□□ 0.34
GFRA2-201ENST00000306793 NCAPD3P42695 1498 aa17.14■□□□□ 0.33
GFRA2-201ENST00000306793 PRXQ9BXM0 1461 aa17.14■□□□□ 0.33
GFRA2-201ENST00000306793 ZNF777Q9ULD5 760 aaPredicted RBP17.14■□□□□ 0.33
GFRA2-201ENST00000306793 PEG3Q9GZU2 1588 aa17.12■□□□□ 0.33
GFRA2-201ENST00000306793 MTUS2Q5JR59 1369 aa17.11■□□□□ 0.33
GFRA2-201ENST00000306793 PHLDB1Q86UU1 1377 aa17.11■□□□□ 0.33
GFRA2-201ENST00000306793 CFTRP13569 1480 aa17.09■□□□□ 0.33
GFRA2-201ENST00000306793 IRX6P78412 446 aaPredicted RBP17.08■□□□□ 0.32
GFRA2-201ENST00000306793 FANCD2Q9BXW9 1451 aa17.07■□□□□ 0.32
GFRA2-201ENST00000306793 PELP1Q8IZL8 1130 aaKnown RBP17.06■□□□□ 0.32
GFRA2-201ENST00000306793 FKBP8Q14318 412 aa17.02■□□□□ 0.31
GFRA2-201ENST00000306793 TONSLQ96HA7 1378 aa17■□□□□ 0.31
GFRA2-201ENST00000306793 CC2D2AQ9P2K1 1620 aa16.99■□□□□ 0.31
GFRA2-201ENST00000306793 SETD5Q9C0A6 1442 aa16.97■□□□□ 0.31
GFRA2-201ENST00000306793 ANP32CO43423 234 aa16.97■□□□□ 0.31
GFRA2-201ENST00000306793 SUPT16HQ9Y5B9 1047 aaKnown RBP16.94■□□□□ 0.3
GFRA2-201ENST00000306793 NEFLP07196 543 aa16.91■□□□□ 0.3
GFRA2-201ENST00000306793 HMGXB3Q12766 1538 aa16.91■□□□□ 0.3
GFRA2-201ENST00000306793 ERICH3Q5RHP9 1530 aa16.91■□□□□ 0.3
GFRA2-201ENST00000306793 BIVM-ERCC5R4GMW8 1640 aa16.9■□□□□ 0.3
GFRA2-201ENST00000306793 HNRNPUQ00839 825 aaKnown RBP eCLIP16.89■□□□□ 0.29
GFRA2-201ENST00000306793 FAM9BQ8IZU0 186 aa16.89■□□□□ 0.29
GFRA2-201ENST00000306793 POLA1P09884 1462 aaPredicted RBP16.88■□□□□ 0.29
GFRA2-201ENST00000306793 LRRC9Q6ZRR7 1453 aa16.88■□□□□ 0.29
GFRA2-201ENST00000306793 ZNF644Q9H582 1327 aaPredicted RBP16.87■□□□□ 0.29
GFRA2-201ENST00000306793 RRBP1Q9P2E9 1410 aaKnown RBP16.87■□□□□ 0.29
GFRA2-201ENST00000306793 AQRO60306 1485 aaKnown RBP eCLIP16.86■□□□□ 0.29
GFRA2-201ENST00000306793 FHAD1B1AJZ9 1412 aa16.86■□□□□ 0.29
GFRA2-201ENST00000306793 KDM2AQ9Y2K7 1162 aa16.83■□□□□ 0.29
GFRA2-201ENST00000306793 PPP1R15AO75807 674 aaPredicted RBP16.83■□□□□ 0.28
GFRA2-201ENST00000306793 CHMP7Q8WUX9 453 aaPredicted RBP16.82■□□□□ 0.28
GFRA2-201ENST00000306793 TOPBP1Q92547 1522 aa16.81■□□□□ 0.28
GFRA2-201ENST00000306793 PDS5BQ9NTI5 1447 aa16.81■□□□□ 0.28
GFRA2-201ENST00000306793 CLSPNQ9HAW4 1339 aa16.81■□□□□ 0.28
GFRA2-201ENST00000306793 SALL2Q9Y467 1007 aaPredicted RBP16.81■□□□□ 0.28
GFRA2-201ENST00000306793 WDR97A6NE52 1622 aa16.8■□□□□ 0.28
GFRA2-201ENST00000306793 PCF11O94913 1555 aaKnown RBP16.79■□□□□ 0.28
GFRA2-201ENST00000306793 SLC4A1APQ9BWU0 796 aaKnown RBP16.79■□□□□ 0.28
GFRA2-201ENST00000306793 TIAM1Q13009 1591 aa16.78■□□□□ 0.28
GFRA2-201ENST00000306793 HSPA5P11021 654 aaKnown RBP16.75■□□□□ 0.27
GFRA2-201ENST00000306793 SENP3Q9H4L4 574 aaPredicted RBP16.75■□□□□ 0.27
GFRA2-201ENST00000306793 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.75■□□□□ 0.27
GFRA2-201ENST00000306793 GAPVD1Q14C86 1478 aa16.74■□□□□ 0.27
GFRA2-201ENST00000306793 MYT1LQ9UL68 1186 aa16.73■□□□□ 0.27
GFRA2-201ENST00000306793 L3MBTL2Q969R5 705 aa16.72■□□□□ 0.27
GFRA2-201ENST00000306793 PTPRKQ15262 1439 aa16.71■□□□□ 0.27
GFRA2-201ENST00000306793 URB2Q14146 1524 aaKnown RBP16.7■□□□□ 0.26
GFRA2-201ENST00000306793 FGD6Q6ZV73 1430 aa16.7■□□□□ 0.26
GFRA2-201ENST00000306793 MAPKBP1O60336 1514 aa16.7■□□□□ 0.26
GFRA2-201ENST00000306793 MPHOSPH9Q99550 1183 aa16.69■□□□□ 0.26
GFRA2-201ENST00000306793 CCDC18Q5T9S5 1454 aa16.69■□□□□ 0.26
GFRA2-201ENST00000306793 RGL3Q3MIN7 710 aa16.69■□□□□ 0.26
GFRA2-201ENST00000306793 CCDC184Q52MB2 194 aa16.69■□□□□ 0.26
GFRA2-201ENST00000306793 CFDP1Q9UEE9 299 aaPredicted RBP16.69■□□□□ 0.26
GFRA2-201ENST00000306793 FMN1Q68DA7 1419 aa16.68■□□□□ 0.26
GFRA2-201ENST00000306793 MRS2Q9HD23 443 aa16.67■□□□□ 0.26
GFRA2-201ENST00000306793 EIF4G2P78344 907 aaKnown RBP eCLIP16.66■□□□□ 0.26
GFRA2-201ENST00000306793 NCOA2Q15596 1464 aa16.64■□□□□ 0.26
GFRA2-201ENST00000306793 CDK13Q14004 1512 aaKnown RBP16.64■□□□□ 0.25
GFRA2-201ENST00000306793 CASKIN1Q8WXD9 1431 aa16.62■□□□□ 0.25
GFRA2-201ENST00000306793 TSHZ2Q9NRE2 1034 aa16.62■□□□□ 0.25
GFRA2-201ENST00000306793 ERCC6Q03468 1493 aa16.6■□□□□ 0.25
GFRA2-201ENST00000306793 DNMBPQ6XZF7 1577 aa16.6■□□□□ 0.25
GFRA2-201ENST00000306793 C11orf95C9JLR9 678 aaPredicted RBP16.6■□□□□ 0.25
GFRA2-201ENST00000306793 CDK11AQ9UQ88 783 aaPredicted RBP16.6■□□□□ 0.25
GFRA2-201ENST00000306793 ABCA10Q8WWZ4 1543 aa16.59■□□□□ 0.25
GFRA2-201ENST00000306793 ZNF608Q9ULD9 1512 aaPredicted RBP16.58■□□□□ 0.24
GFRA2-201ENST00000306793 HNRNPMP52272 730 aaKnown RBP eCLIP16.57■□□□□ 0.24
GFRA2-201ENST00000306793 PKD2Q13563 968 aa16.56■□□□□ 0.24
GFRA2-201ENST00000306793 NBPF8Q3BBV2 869 aa16.56■□□□□ 0.24
GFRA2-201ENST00000306793 WASHC2AQ641Q2 1341 aa16.56■□□□□ 0.24
GFRA2-201ENST00000306793 MYOM3Q5VTT5 1437 aa16.56■□□□□ 0.24
GFRA2-201ENST00000306793 FYCO1Q9BQS8 1478 aa16.55■□□□□ 0.24
GFRA2-201ENST00000306793 PRDM2Q13029 1718 aa16.53■□□□□ 0.24
GFRA2-201ENST00000306793 B4GALNT3Q6L9W6 998 aa16.52■□□□□ 0.24
GFRA2-201ENST00000306793 NAIPQ13075 1403 aa16.52■□□□□ 0.24
GFRA2-201ENST00000306793 PLEKHD1A6NEE1 506 aa16.51■□□□□ 0.23
GFRA2-201ENST00000306793 DCAF11Q8TEB1 546 aa16.49■□□□□ 0.23
GFRA2-201ENST00000306793 JPH4Q96JJ6 628 aa16.49■□□□□ 0.23
GFRA2-201ENST00000306793 PRG4Q92954 1404 aaPredicted RBP16.48■□□□□ 0.23
GFRA2-201ENST00000306793 TSPY4P0CV99 314 aa16.48■□□□□ 0.23
GFRA2-201ENST00000306793 TSPY10P0CW01 314 aa16.48■□□□□ 0.23
GFRA2-201ENST00000306793 UACAQ9BZF9 1416 aa16.47■□□□□ 0.23
GFRA2-201ENST00000306793 ERICH6Q7L0X2 663 aa16.46■□□□□ 0.23
GFRA2-201ENST00000306793 CARD11Q9BXL7 1154 aa16.46■□□□□ 0.22
GFRA2-201ENST00000306793 HFM1A2PYH4 1435 aa16.43■□□□□ 0.22
GFRA2-201ENST00000306793 SNAPC4Q5SXM2 1469 aa16.43■□□□□ 0.22
GFRA2-201ENST00000306793 MAGI3Q5TCQ9 1506 aa16.42■□□□□ 0.22
GFRA2-201ENST00000306793 KIF21AQ7Z4S6 1674 aa16.42■□□□□ 0.22
GFRA2-201ENST00000306793 TMC1Q8TDI8 760 aa16.41■□□□□ 0.22
GFRA2-201ENST00000306793 NUP155O75694 1391 aa16.41■□□□□ 0.22
GFRA2-201ENST00000306793 TIMELESSQ9UNS1 1208 aa16.4■□□□□ 0.22
GFRA2-201ENST00000306793 THOC2Q8NI27 1593 aaKnown RBP16.4■□□□□ 0.22
GFRA2-201ENST00000306793 PLB1Q6P1J6 1458 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms