RNA–Protein interactions for RNA: ENST00000306256.13

RER1-201, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 5

Gene RER1, Length 695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-201ENST00000306256 IGF1RP08069 1367 aa35.81■■■■□ 3.32
RER1-201ENST00000306256 CUL7Q14999 1698 aa35.81■■■■□ 3.32
RER1-201ENST00000306256 KIAA0586Q9BVV6 1533 aa35.66■■■■□ 3.3
RER1-201ENST00000306256 KIF13AQ9H1H9 1805 aa35.6■■■■□ 3.29
RER1-201ENST00000306256 CARMIL1Q5VZK9 1371 aa35.59■■■■□ 3.29
RER1-201ENST00000306256 ADCY10Q96PN6 1610 aa35.52■■■■□ 3.28
RER1-201ENST00000306256 IQGAP2Q13576 1575 aa35.39■■■■□ 3.26
RER1-201ENST00000306256 MAPKBP1O60336 1514 aa35.39■■■■□ 3.26
RER1-201ENST00000306256 NPM1P06748 294 aaKnown RBP eCLIP35.39■■■■□ 3.26
RER1-201ENST00000306256 ABCC10Q5T3U5 1492 aa35.34■■■■□ 3.25
RER1-201ENST00000306256 DIP2BQ9P265 1576 aa35.32■■■■□ 3.24
RER1-201ENST00000306256 PTPRGP23470 1445 aa35.32■■■■□ 3.24
RER1-201ENST00000306256 TTBK1Q5TCY1 1321 aaPredicted RBP35.32■■■■□ 3.24
RER1-201ENST00000306256 FAM69CQ0P6D2 419 aa35.3■■■■□ 3.24
RER1-201ENST00000306256 CARMIL2Q6F5E8 1435 aa35.29■■■■□ 3.24
RER1-201ENST00000306256 RAPGEF2Q9Y4G8 1499 aa35.29■■■■□ 3.24
RER1-201ENST00000306256 TNIKQ9UKE5 1360 aa35.25■■■■□ 3.23
RER1-201ENST00000306256 DISP1Q96F81 1524 aa35.2■■■■□ 3.23
RER1-201ENST00000306256 TSPOAP1O95153 1857 aa35.18■■■■□ 3.22
RER1-201ENST00000306256 UGGT2Q9NYU1 1516 aa35.14■■■■□ 3.22
RER1-201ENST00000306256 ABCC2Q92887 1545 aa35.13■■■■□ 3.21
RER1-201ENST00000306256 AEBP2Q6ZN18 517 aaPredicted RBP35.11■■■■□ 3.21
RER1-201ENST00000306256 CTTNBP2Q8WZ74 1663 aa35.11■■■■□ 3.21
RER1-201ENST00000306256 KIAA0556O60303 1618 aa35.09■■■■□ 3.21
RER1-201ENST00000306256 UHRF1BP1LA0JNW5 1464 aa35.06■■■■□ 3.2
RER1-201ENST00000306256 UACAQ9BZF9 1416 aa35.06■■■■□ 3.2
RER1-201ENST00000306256 ASXL2Q76L83 1435 aa35.01■■■■□ 3.2
RER1-201ENST00000306256 KDM6BO15054 1643 aa34.98■■■■□ 3.19
RER1-201ENST00000306256 PLB1Q6P1J6 1458 aa34.96■■■■□ 3.19
RER1-201ENST00000306256 PRXQ9BXM0 1461 aa34.95■■■■□ 3.19
RER1-201ENST00000306256 ZCCHC11Q5TAX3 1644 aaKnown RBP34.92■■■■□ 3.18
RER1-201ENST00000306256 KDM5BQ9UGL1 1544 aa34.91■■■■□ 3.18
RER1-201ENST00000306256 GLI2P10070 1586 aa34.89■■■■□ 3.18
RER1-201ENST00000306256 PPRC1Q5VV67 1664 aaKnown RBP34.89■■■■□ 3.18
RER1-201ENST00000306256 GOLGA3Q08378 1498 aa34.84■■■■□ 3.17
RER1-201ENST00000306256 EPRSP07814 1512 aaKnown RBP34.8■■■■□ 3.16
RER1-201ENST00000306256 MAP3K4Q9Y6R4 1608 aa34.75■■■■□ 3.15
RER1-201ENST00000306256 ABCA8O94911 1581 aa34.74■■■■□ 3.15
RER1-201ENST00000306256 WDR7Q9Y4E6 1490 aa34.69■■■■□ 3.14
RER1-201ENST00000306256 CSRNP3Q8WYN3 585 aa34.67■■■■□ 3.14
RER1-201ENST00000306256 P3H3Q8IVL6 736 aa34.59■■■■□ 3.13
RER1-201ENST00000306256 TEX14Q8IWB6 1497 aa34.58■■■■□ 3.13
RER1-201ENST00000306256 COL17A1Q9UMD9 1497 aaPredicted RBP34.58■■■■□ 3.13
RER1-201ENST00000306256 SAMD9Q5K651 1589 aa34.55■■■■□ 3.12
RER1-201ENST00000306256 EEA1Q15075 1411 aa34.54■■■■□ 3.12
RER1-201ENST00000306256 KDM4FA0A1W2PPD8 638 aa34.53■■■■□ 3.12
RER1-201ENST00000306256 CFAP43Q8NDM7 1665 aa34.51■■■■□ 3.12
RER1-201ENST00000306256 KCNH8Q96L42 1107 aa34.5■■■■□ 3.11
RER1-201ENST00000306256 ARID3CA6NKF2 412 aa34.49■■■■□ 3.11
RER1-201ENST00000306256 FAM9AQ8IZU1 332 aaPredicted RBP34.47■■■■□ 3.11
RER1-201ENST00000306256 CD109Q6YHK3 1445 aa34.44■■■■□ 3.1
RER1-201ENST00000306256 ATP10BO94823 1461 aa34.42■■■■□ 3.1
RER1-201ENST00000306256 RAPGEF6Q8TEU7 1601 aa34.41■■■■□ 3.1
RER1-201ENST00000306256 MAGI3Q5TCQ9 1506 aa34.4■■■■□ 3.1
RER1-201ENST00000306256 RANGAP1P46060 587 aaPredicted RBP34.4■■■■□ 3.1
RER1-201ENST00000306256 KIF21BO75037 1637 aa34.35■■■■□ 3.09
RER1-201ENST00000306256 ADGRL1O94910 1474 aa34.33■■■■□ 3.09
RER1-201ENST00000306256 FHOD3Q2V2M9 1422 aa34.32■■■■□ 3.08
RER1-201ENST00000306256 NUP153P49790 1475 aaKnown RBP34.26■■■■□ 3.07
RER1-201ENST00000306256 ABCA9Q8IUA7 1624 aa34.26■■■■□ 3.07
RER1-201ENST00000306256 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.21■■■■□ 3.07
RER1-201ENST00000306256 HNRNPUL2Q1KMD3 747 aaKnown RBP34.21■■■■□ 3.07
RER1-201ENST00000306256 EFCAB5A4FU69 1503 aa34.19■■■■□ 3.06
RER1-201ENST00000306256 CHIC1Q5VXU3 224 aa34.15■■■■□ 3.06
RER1-201ENST00000306256 EHMT2Q96KQ7 1210 aa34.15■■■■□ 3.06
RER1-201ENST00000306256 ARAP3Q8WWN8 1544 aa34.14■■■■□ 3.06
RER1-201ENST00000306256 UBTFP17480 764 aaKnown RBP34.03■■■■□ 3.04
RER1-201ENST00000306256 NEO1Q92859 1461 aa34.01■■■■□ 3.04
RER1-201ENST00000306256 PHLDB1Q86UU1 1377 aa34.01■■■■□ 3.04
RER1-201ENST00000306256 PLEKHD1A6NEE1 506 aa33.99■■■■□ 3.03
RER1-201ENST00000306256 CDK13Q14004 1512 aaKnown RBP33.98■■■■□ 3.03
RER1-201ENST00000306256 FRMPD1Q5SYB0 1578 aa33.95■■■■□ 3.03
RER1-201ENST00000306256 RAPGEF3O95398 923 aa33.95■■■■□ 3.03
RER1-201ENST00000306256 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.94■■■■□ 3.024e-13■■■□□ 16.9
RER1-201ENST00000306256 TTC37Q6PGP7 1564 aa33.93■■■■□ 3.02
RER1-201ENST00000306256 ARHGAP35Q9NRY4 1499 aa33.92■■■■□ 3.02
RER1-201ENST00000306256 HECW1Q76N89 1606 aa33.86■■■■□ 3.01
RER1-201ENST00000306256 FMN1Q68DA7 1419 aa33.85■■■■□ 3.01
RER1-201ENST00000306256 CFAP74Q9C0B2 1584 aa33.85■■■■□ 3.01
RER1-201ENST00000306256 HECW2Q9P2P5 1572 aa33.85■■■■□ 3.01
RER1-201ENST00000306256 RICTORQ6R327 1708 aa33.84■■■■□ 3.01
RER1-201ENST00000306256 FANCAO15360 1455 aa33.83■■■■□ 3.01
RER1-201ENST00000306256 ATP1B4Q9UN42 357 aaPredicted RBP33.82■■■■□ 3
RER1-201ENST00000306256 AKNAQ7Z591 1439 aa33.81■■■■□ 3
RER1-201ENST00000306256 DENND4BO75064 1496 aaPredicted RBP33.79■■■■□ 3
RER1-201ENST00000306256 ADAMTSL3P82987 1691 aa33.77■■■■□ 3
RER1-201ENST00000306256 ARHGEF40Q8TER5 1519 aa33.75■■■□□ 2.99
RER1-201ENST00000306256 LRRIQ1Q96JM4 1722 aa33.75■■■□□ 2.99
RER1-201ENST00000306256 BCORL1Q5H9F3 1711 aa33.72■■■□□ 2.99
RER1-201ENST00000306256 MYO5CQ9NQX4 1742 aa33.7■■■□□ 2.98
RER1-201ENST00000306256 KIF14Q15058 1648 aa33.69■■■□□ 2.98
RER1-201ENST00000306256 ARID4BQ4LE39 1312 aaPredicted RBP33.67■■■□□ 2.98
RER1-201ENST00000306256 PLCH2O75038 1416 aa33.66■■■□□ 2.98
RER1-201ENST00000306256 ZMYM4Q5VZL5 1548 aa33.66■■■□□ 2.98
RER1-201ENST00000306256 MADDQ8WXG6 1647 aa33.65■■■□□ 2.98
RER1-201ENST00000306256 PTPRMP28827 1452 aa33.64■■■□□ 2.98
RER1-201ENST00000306256 CDK11AQ9UQ88 783 aaPredicted RBP33.62■■■□□ 2.97
RER1-201ENST00000306256 PCF11O94913 1555 aaKnown RBP33.61■■■□□ 2.97
RER1-201ENST00000306256 ZFYVE16Q7Z3T8 1539 aa33.6■■■□□ 2.97
RER1-201ENST00000306256 TROQ12816 1431 aaPredicted RBP33.6■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms