RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 MRS2Q9HD23 443 aa18.17■□□□□ 0.5
DDX54-201ENST00000306014 ANP32AP39687 249 aaKnown RBP18.17■□□□□ 0.5
DDX54-201ENST00000306014 ANP32EQ9BTT0 268 aa18.17■□□□□ 0.5
DDX54-201ENST00000306014 CADPSQ9ULU8 1353 aa18.15■□□□□ 0.5
DDX54-201ENST00000306014 RRP7BPQ9NSQ0 103 aa18.15■□□□□ 0.5
DDX54-201ENST00000306014 PDS5BQ9NTI5 1447 aa18.14■□□□□ 0.49
DDX54-201ENST00000306014 NPM2Q86SE8 214 aaKnown RBP18.14■□□□□ 0.49
DDX54-201ENST00000306014 SLC4A1APQ9BWU0 796 aaKnown RBP18.14■□□□□ 0.49
DDX54-201ENST00000306014 EIF4G1Q04637 1599 aaKnown RBP18.12■□□□□ 0.49
DDX54-201ENST00000306014 EIF4G2P78344 907 aaKnown RBP eCLIP18.1■□□□□ 0.493e-8■■■■□ 20.3
DDX54-201ENST00000306014 SALL2Q9Y467 1007 aaPredicted RBP18.08■□□□□ 0.49
DDX54-201ENST00000306014 CCDC136Q96JN2 1154 aa18.07■□□□□ 0.48
DDX54-201ENST00000306014 NCAPD3P42695 1498 aa18.06■□□□□ 0.48
DDX54-201ENST00000306014 NBR1Q14596 966 aa18.04■□□□□ 0.48
DDX54-201ENST00000306014 TMC1Q8TDI8 760 aa18.03■□□□□ 0.48
DDX54-201ENST00000306014 RAPGEF2Q9Y4G8 1499 aa18.03■□□□□ 0.48
DDX54-201ENST00000306014 SENP3-EIF4A1A0A087X0R7 540 aa18.01■□□□□ 0.47
DDX54-201ENST00000306014 CUX2O14529 1486 aa18.01■□□□□ 0.47
DDX54-201ENST00000306014 BICRAQ9NZM4 1560 aa18■□□□□ 0.47
DDX54-201ENST00000306014 RAB3GAP2Q9H2M9 1393 aa18■□□□□ 0.47
DDX54-201ENST00000306014 DHX57Q6P158 1386 aaKnown RBP17.98■□□□□ 0.47
DDX54-201ENST00000306014 TSHZ2Q9NRE2 1034 aa17.98■□□□□ 0.47
DDX54-201ENST00000306014 SETD5Q9C0A6 1442 aa17.98■□□□□ 0.47
DDX54-201ENST00000306014 KCNH8Q96L42 1107 aa17.97■□□□□ 0.47
DDX54-201ENST00000306014 CARMIL1Q5VZK9 1371 aa17.95■□□□□ 0.46
DDX54-201ENST00000306014 KDM2AQ9Y2K7 1162 aa17.95■□□□□ 0.46
DDX54-201ENST00000306014 ZBTB47Q9UFB7 747 aaPredicted RBP17.93■□□□□ 0.46
DDX54-201ENST00000306014 NPM1P06748 294 aaKnown RBP eCLIP17.93■□□□□ 0.46
DDX54-201ENST00000306014 TIMELESSQ9UNS1 1208 aa17.93■□□□□ 0.46
DDX54-201ENST00000306014 RBM19Q9Y4C8 960 aaKnown RBP17.93■□□□□ 0.46
DDX54-201ENST00000306014 CCER2I3L3R5 266 aa17.92■□□□□ 0.46
DDX54-201ENST00000306014 FHAD1B1AJZ9 1412 aa17.91■□□□□ 0.46
DDX54-201ENST00000306014 TDRD9Q8NDG6 1382 aaKnown RBP17.9■□□□□ 0.46
DDX54-201ENST00000306014 FANCD2Q9BXW9 1451 aa17.89■□□□□ 0.45
DDX54-201ENST00000306014 CANXP27824 592 aaKnown RBP17.88■□□□□ 0.45
DDX54-201ENST00000306014 PPP4R2Q9NY27 417 aa17.86■□□□□ 0.45
DDX54-201ENST00000306014 B4GALNT3Q6L9W6 998 aa17.86■□□□□ 0.45
DDX54-201ENST00000306014 CC2D2AQ9P2K1 1620 aa17.85■□□□□ 0.45
DDX54-201ENST00000306014 PPP1R15AO75807 674 aaPredicted RBP17.84■□□□□ 0.45
DDX54-201ENST00000306014 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.81■□□□□ 0.442e-6■■■□□ 15.7
DDX54-201ENST00000306014 TSPY4P0CV99 314 aa17.8■□□□□ 0.44
DDX54-201ENST00000306014 TSPY10P0CW01 314 aa17.8■□□□□ 0.44
DDX54-201ENST00000306014 HSPA5P11021 654 aaKnown RBP17.79■□□□□ 0.44
DDX54-201ENST00000306014 ARHGAP35Q9NRY4 1499 aa17.79■□□□□ 0.44
DDX54-201ENST00000306014 UNC13AQ9UPW8 1703 aa17.76■□□□□ 0.43
DDX54-201ENST00000306014 HMGXB3Q12766 1538 aa17.75■□□□□ 0.43
DDX54-201ENST00000306014 FOXD1Q16676 465 aa17.74■□□□□ 0.43
DDX54-201ENST00000306014 CFDP1Q9UEE9 299 aaPredicted RBP17.72■□□□□ 0.43
DDX54-201ENST00000306014 BCL11AQ9H165 835 aa17.71■□□□□ 0.43
DDX54-201ENST00000306014 PLEKHD1A6NEE1 506 aa17.71■□□□□ 0.43
DDX54-201ENST00000306014 CARD11Q9BXL7 1154 aa17.71■□□□□ 0.43
DDX54-201ENST00000306014 DNAJC5BQ9UF47 199 aa17.71■□□□□ 0.43
DDX54-201ENST00000306014 RGL3Q3MIN7 710 aa17.7■□□□□ 0.42
DDX54-201ENST00000306014 CFTRP13569 1480 aa17.7■□□□□ 0.42
DDX54-201ENST00000306014 KIF21BO75037 1637 aa17.7■□□□□ 0.42
DDX54-201ENST00000306014 WDR43Q15061 677 aaKnown RBP eCLIP17.68■□□□□ 0.42
DDX54-201ENST00000306014 NOP58Q9Y2X3 529 aaKnown RBP17.67■□□□□ 0.42
DDX54-201ENST00000306014 FHOD3Q2V2M9 1422 aa17.67■□□□□ 0.42
DDX54-201ENST00000306014 NESP48681 1621 aa17.66■□□□□ 0.42
DDX54-201ENST00000306014 EIF5BO60841 1220 aaKnown RBP17.65■□□□□ 0.42
DDX54-201ENST00000306014 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.63■□□□□ 0.41
DDX54-201ENST00000306014 FGD5Q6ZNL6 1462 aa17.62■□□□□ 0.41
DDX54-201ENST00000306014 MPHOSPH9Q99550 1183 aa17.62■□□□□ 0.41
DDX54-201ENST00000306014 CHGAP10645 457 aaKnown RBP17.61■□□□□ 0.41
DDX54-201ENST00000306014 L3MBTL2Q969R5 705 aa17.6■□□□□ 0.41
DDX54-201ENST00000306014 FMN1Q68DA7 1419 aa17.59■□□□□ 0.41
DDX54-201ENST00000306014 LAS1LQ9Y4W2 734 aaKnown RBP17.58■□□□□ 0.41
DDX54-201ENST00000306014 SYNJ1O43426 1573 aa17.58■□□□□ 0.4
DDX54-201ENST00000306014 RAD54L2Q9Y4B4 1467 aa17.57■□□□□ 0.4
DDX54-201ENST00000306014 ERICH6BQ5W0A0 696 aa17.57■□□□□ 0.4
DDX54-201ENST00000306014 UPF2Q9HAU5 1272 aaKnown RBP17.56■□□□□ 0.4
DDX54-201ENST00000306014 DEKP35659 375 aaKnown RBP17.55■□□□□ 0.4
DDX54-201ENST00000306014 ARAP1Q96P48 1450 aa17.54■□□□□ 0.4
DDX54-201ENST00000306014 DCAF11Q8TEB1 546 aa17.54■□□□□ 0.4
DDX54-201ENST00000306014 CARMIL2Q6F5E8 1435 aa17.53■□□□□ 0.4
DDX54-201ENST00000306014 ARXQ96QS3 562 aa17.52■□□□□ 0.4
DDX54-201ENST00000306014 PHLDB1Q86UU1 1377 aa17.52■□□□□ 0.4
DDX54-201ENST00000306014 CC2D1BQ5T0F9 858 aaKnown RBP17.52■□□□□ 0.4
DDX54-201ENST00000306014 PEG3Q9GZU2 1588 aa17.52■□□□□ 0.39
DDX54-201ENST00000306014 IGF1RP08069 1367 aa17.52■□□□□ 0.39
DDX54-201ENST00000306014 DDRGK1Q96HY6 314 aa17.51■□□□□ 0.39
DDX54-201ENST00000306014 NEFMP07197 916 aa17.51■□□□□ 0.39
DDX54-201ENST00000306014 PKD2Q13563 968 aa17.51■□□□□ 0.39
DDX54-201ENST00000306014 GAPVD1Q14C86 1478 aa17.51■□□□□ 0.39
DDX54-201ENST00000306014 JPH4Q96JJ6 628 aa17.49■□□□□ 0.39
DDX54-201ENST00000306014 RRBP1Q9P2E9 1410 aaKnown RBP17.49■□□□□ 0.39
DDX54-201ENST00000306014 KNSTRNQ9Y448 316 aa17.48■□□□□ 0.39
DDX54-201ENST00000306014 RTN4Q9NQC3 1192 aaKnown RBP17.47■□□□□ 0.39
DDX54-201ENST00000306014 ESF1Q9H501 851 aaKnown RBP17.47■□□□□ 0.39
DDX54-201ENST00000306014 CCDC18Q5T9S5 1454 aa17.46■□□□□ 0.39
DDX54-201ENST00000306014 PRKRIP1Q9H875 184 aaPredicted RBP17.46■□□□□ 0.39
DDX54-201ENST00000306014 PPM1GO15355 546 aaPredicted RBP17.45■□□□□ 0.38
DDX54-201ENST00000306014 RGS3P49796 1198 aa17.45■□□□□ 0.38
DDX54-201ENST00000306014 AQRO60306 1485 aaKnown RBP eCLIP17.45■□□□□ 0.384e-7■■■■■ 37.5
DDX54-201ENST00000306014 HSP90AA1P07900 732 aaKnown RBP17.44■□□□□ 0.38
DDX54-201ENST00000306014 NUDCQ9Y266 331 aa17.44■□□□□ 0.38
DDX54-201ENST00000306014 LRRC9Q6ZRR7 1453 aa17.42■□□□□ 0.38
DDX54-201ENST00000306014 MRC2Q9UBG0 1479 aa17.42■□□□□ 0.38
DDX54-201ENST00000306014 TOPBP1Q92547 1522 aa17.41■□□□□ 0.38
DDX54-201ENST00000306014 PRXQ9BXM0 1461 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms