RNA–Protein interactions for RNA: ENST00000304778.11

LONRF3-201, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

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Gene LONRF3, Length 2,989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-201ENST00000304778 CUL7Q14999 1698 aa24.05■■□□□ 1.44
LONRF3-201ENST00000304778 KANK4Q5T7N3 995 aaPredicted RBP24.03■■□□□ 1.44
LONRF3-201ENST00000304778 ABCA5Q8WWZ7 1642 aa24.02■■□□□ 1.44
LONRF3-201ENST00000304778 GAPVD1Q14C86 1478 aa24■■□□□ 1.43
LONRF3-201ENST00000304778 HNRNPUL2Q1KMD3 747 aaKnown RBP24■■□□□ 1.43
LONRF3-201ENST00000304778 ZNF316A6NFI3 1004 aaPredicted RBP23.97■■□□□ 1.43
LONRF3-201ENST00000304778 TARBP1Q13395 1621 aaKnown RBP23.96■■□□□ 1.43
LONRF3-201ENST00000304778 MRC2Q9UBG0 1479 aa23.94■■□□□ 1.42
LONRF3-201ENST00000304778 P3H3Q8IVL6 736 aa23.93■■□□□ 1.42
LONRF3-201ENST00000304778 CTTNBP2Q8WZ74 1663 aa23.89■■□□□ 1.41
LONRF3-201ENST00000304778 FHOD3Q2V2M9 1422 aa23.84■■□□□ 1.41
LONRF3-201ENST00000304778 FHAD1B1AJZ9 1412 aa23.84■■□□□ 1.41
LONRF3-201ENST00000304778 EFCAB5A4FU69 1503 aa23.83■■□□□ 1.41
LONRF3-201ENST00000304778 TIAM1Q13009 1591 aa23.82■■□□□ 1.4
LONRF3-201ENST00000304778 MAP3K1Q13233 1512 aa23.81■■□□□ 1.4
LONRF3-201ENST00000304778 AQRO60306 1485 aaKnown RBP eCLIP23.81■■□□□ 1.43e-9■■■■□ 21.5
LONRF3-201ENST00000304778 PCF11O94913 1555 aaKnown RBP23.79■■□□□ 1.4
LONRF3-201ENST00000304778 RRBP1Q9P2E9 1410 aaKnown RBP23.78■■□□□ 1.4
LONRF3-201ENST00000304778 MIER1Q8N108 512 aa23.78■■□□□ 1.4
LONRF3-201ENST00000304778 PBRM1Q86U86 1689 aa23.77■■□□□ 1.4
LONRF3-201ENST00000304778 WDR62O43379 1518 aa23.77■■□□□ 1.4
LONRF3-201ENST00000304778 ATP1B4Q9UN42 357 aaPredicted RBP23.75■■□□□ 1.39
LONRF3-201ENST00000304778 LRRC9Q6ZRR7 1453 aa23.73■■□□□ 1.39
LONRF3-201ENST00000304778 ERCC6Q03468 1493 aa23.72■■□□□ 1.39
LONRF3-201ENST00000304778 IFT140Q96RY7 1462 aa23.72■■□□□ 1.39
LONRF3-201ENST00000304778 CCNB3Q8WWL7 1395 aa23.7■■□□□ 1.38
LONRF3-201ENST00000304778 ZNF608Q9ULD9 1512 aaPredicted RBP23.7■■□□□ 1.38
LONRF3-201ENST00000304778 CASKIN1Q8WXD9 1431 aa23.7■■□□□ 1.38
LONRF3-201ENST00000304778 FYCO1Q9BQS8 1478 aa23.69■■□□□ 1.38
LONRF3-201ENST00000304778 GRIN2BQ13224 1484 aa23.69■■□□□ 1.38
LONRF3-201ENST00000304778 CFAP43Q8NDM7 1665 aa23.69■■□□□ 1.38
LONRF3-201ENST00000304778 CLSPNQ9HAW4 1339 aa23.68■■□□□ 1.38
LONRF3-201ENST00000304778 SAMD9Q5K651 1589 aa23.68■■□□□ 1.38
LONRF3-201ENST00000304778 ADAMTS12P58397 1594 aa23.68■■□□□ 1.38
LONRF3-201ENST00000304778 FMN1Q68DA7 1419 aa23.67■■□□□ 1.38
LONRF3-201ENST00000304778 DHX57Q6P158 1386 aaKnown RBP23.63■■□□□ 1.37
LONRF3-201ENST00000304778 SNAPC4Q5SXM2 1469 aa23.61■■□□□ 1.37
LONRF3-201ENST00000304778 PHLDB1Q86UU1 1377 aa23.61■■□□□ 1.37
LONRF3-201ENST00000304778 THOC2Q8NI27 1593 aaKnown RBP23.59■■□□□ 1.37
LONRF3-201ENST00000304778 ITGAEP38570 1179 aa23.58■■□□□ 1.37
LONRF3-201ENST00000304778 IQGAP2Q13576 1575 aa23.55■■□□□ 1.36
LONRF3-201ENST00000304778 EIF4G3O43432 1585 aaKnown RBP23.54■■□□□ 1.36
LONRF3-201ENST00000304778 LRRIQ1Q96JM4 1722 aa23.49■■□□□ 1.35
LONRF3-201ENST00000304778 FAM50AQ14320 339 aaKnown RBP23.48■■□□□ 1.35
LONRF3-201ENST00000304778 BCL11AQ9H165 835 aa23.46■■□□□ 1.35
LONRF3-201ENST00000304778 MTUS2Q5JR59 1369 aa23.45■■□□□ 1.34
LONRF3-201ENST00000304778 GRIN2AQ12879 1464 aa23.43■■□□□ 1.34
LONRF3-201ENST00000304778 UGGT2Q9NYU1 1516 aa23.42■■□□□ 1.34
LONRF3-201ENST00000304778 KIAA0586Q9BVV6 1533 aa23.41■■□□□ 1.34
LONRF3-201ENST00000304778 MAGI1Q96QZ7 1491 aaPredicted RBP23.39■■□□□ 1.33
LONRF3-201ENST00000304778 RAB3GAP2Q9H2M9 1393 aa23.38■■□□□ 1.33
LONRF3-201ENST00000304778 CHMP7Q8WUX9 453 aaPredicted RBP23.36■■□□□ 1.33
LONRF3-201ENST00000304778 FGD6Q6ZV73 1430 aa23.35■■□□□ 1.33
LONRF3-201ENST00000304778 SETD5Q9C0A6 1442 aa23.34■■□□□ 1.33
LONRF3-201ENST00000304778 HECW1Q76N89 1606 aa23.34■■□□□ 1.33
LONRF3-201ENST00000304778 CCDC18Q5T9S5 1454 aa23.34■■□□□ 1.33
LONRF3-201ENST00000304778 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.34■■□□□ 1.33
LONRF3-201ENST00000304778 SYNJ2O15056 1496 aa23.34■■□□□ 1.33
LONRF3-201ENST00000304778 NCOA2Q15596 1464 aa23.33■■□□□ 1.33
LONRF3-201ENST00000304778 ANP32EQ9BTT0 268 aa23.33■■□□□ 1.33
LONRF3-201ENST00000304778 EHBP1L1Q8N3D4 1523 aa23.33■■□□□ 1.32
LONRF3-201ENST00000304778 DISP1Q96F81 1524 aa23.33■■□□□ 1.32
LONRF3-201ENST00000304778 MAGI3Q5TCQ9 1506 aa23.32■■□□□ 1.32
LONRF3-201ENST00000304778 FBLN2P98095 1184 aa23.31■■□□□ 1.32
LONRF3-201ENST00000304778 KIAA0556O60303 1618 aa23.31■■□□□ 1.32
LONRF3-201ENST00000304778 EPRSP07814 1512 aaKnown RBP23.3■■□□□ 1.32
LONRF3-201ENST00000304778 SUPT6HQ7KZ85 1726 aaKnown RBP23.3■■□□□ 1.32
LONRF3-201ENST00000304778 CEP170Q5SW79 1584 aa23.28■■□□□ 1.32
LONRF3-201ENST00000304778 MYOM3Q5VTT5 1437 aa23.26■■□□□ 1.31
LONRF3-201ENST00000304778 ARID3CA6NKF2 412 aa23.26■■□□□ 1.31
LONRF3-201ENST00000304778 MAPKBP1O60336 1514 aa23.26■■□□□ 1.31
LONRF3-201ENST00000304778 CDK13Q14004 1512 aaKnown RBP23.26■■□□□ 1.31
LONRF3-201ENST00000304778 ARHGEF11O15085 1522 aa23.23■■□□□ 1.31
LONRF3-201ENST00000304778 SUPT16HQ9Y5B9 1047 aaKnown RBP23.2■■□□□ 1.3
LONRF3-201ENST00000304778 NUP160Q12769 1436 aa23.2■■□□□ 1.3
LONRF3-201ENST00000304778 PTPRKQ15262 1439 aa23.18■■□□□ 1.3
LONRF3-201ENST00000304778 TSHZ2Q9NRE2 1034 aa23.17■■□□□ 1.3
LONRF3-201ENST00000304778 PTPN23Q9H3S7 1636 aa23.16■■□□□ 1.3
LONRF3-201ENST00000304778 JPH4Q96JJ6 628 aa23.16■■□□□ 1.3
LONRF3-201ENST00000304778 NUP153P49790 1475 aaKnown RBP23.15■■□□□ 1.3
LONRF3-201ENST00000304778 RAPGEF6Q8TEU7 1601 aa23.15■■□□□ 1.3
LONRF3-201ENST00000304778 CARMIL2Q6F5E8 1435 aa23.1■■□□□ 1.29
LONRF3-201ENST00000304778 TCOF1Q13428 1488 aaKnown RBP23.09■■□□□ 1.29
LONRF3-201ENST00000304778 HFM1A2PYH4 1435 aa23.08■■□□□ 1.29
LONRF3-201ENST00000304778 KCNH8Q96L42 1107 aa23.08■■□□□ 1.29
LONRF3-201ENST00000304778 PLB1Q6P1J6 1458 aa23.08■■□□□ 1.28
LONRF3-201ENST00000304778 MIA2Q96PC5 1412 aa23.05■■□□□ 1.28
LONRF3-201ENST00000304778 NAIPQ13075 1403 aa23.03■■□□□ 1.28
LONRF3-201ENST00000304778 CDK11AQ9UQ88 783 aaPredicted RBP23.03■■□□□ 1.28
LONRF3-201ENST00000304778 SIN3AQ96ST3 1273 aa23.02■■□□□ 1.28
LONRF3-201ENST00000304778 BCANQ96GW7 911 aa23.01■■□□□ 1.27
LONRF3-201ENST00000304778 CHIC2Q9UKJ5 165 aa23■■□□□ 1.27
LONRF3-201ENST00000304778 PRG4Q92954 1404 aaPredicted RBP22.98■■□□□ 1.27
LONRF3-201ENST00000304778 RRP7BPQ9NSQ0 103 aa22.97■■□□□ 1.27
LONRF3-201ENST00000304778 TROQ12816 1431 aaPredicted RBP22.96■■□□□ 1.27
LONRF3-201ENST00000304778 UACAQ9BZF9 1416 aa22.95■■□□□ 1.27
LONRF3-201ENST00000304778 TIMELESSQ9UNS1 1208 aa22.95■■□□□ 1.26
LONRF3-201ENST00000304778 CHD1O14646 1710 aa22.93■■□□□ 1.26
LONRF3-201ENST00000304778 ABCA8O94911 1581 aa22.92■■□□□ 1.26
LONRF3-201ENST00000304778 ZNF644Q9H582 1327 aaPredicted RBP22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms