RNA–Protein interactions for RNA: ENST00000304514.11

RGPD3-201, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RGPD3, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-201ENST00000304514 AQRO60306 1485 aaKnown RBP eCLIP10.92□□□□□ -0.66
RGPD3-201ENST00000304514 LRRC9Q6ZRR7 1453 aa10.92□□□□□ -0.66
RGPD3-201ENST00000304514 FYCO1Q9BQS8 1478 aa10.91□□□□□ -0.66
RGPD3-201ENST00000304514 SNAPC4Q5SXM2 1469 aa10.9□□□□□ -0.67
RGPD3-201ENST00000304514 DHX57Q6P158 1386 aaKnown RBP10.89□□□□□ -0.67
RGPD3-201ENST00000304514 RANGAP1P46060 587 aaPredicted RBP10.88□□□□□ -0.67
RGPD3-201ENST00000304514 THOC2Q8NI27 1593 aaKnown RBP10.87□□□□□ -0.67
RGPD3-201ENST00000304514 HNRNPUL2Q1KMD3 747 aaKnown RBP10.87□□□□□ -0.67
RGPD3-201ENST00000304514 MAPKBP1O60336 1514 aa10.87□□□□□ -0.67
RGPD3-201ENST00000304514 APLP2Q06481 763 aa10.86□□□□□ -0.67
RGPD3-201ENST00000304514 CASKIN1Q8WXD9 1431 aa10.86□□□□□ -0.67
RGPD3-201ENST00000304514 ADAMTS12P58397 1594 aa10.86□□□□□ -0.67
RGPD3-201ENST00000304514 FHAD1B1AJZ9 1412 aa10.85□□□□□ -0.67
RGPD3-201ENST00000304514 CCNB3Q8WWL7 1395 aa10.85□□□□□ -0.67
RGPD3-201ENST00000304514 CLSPNQ9HAW4 1339 aa10.83□□□□□ -0.68
RGPD3-201ENST00000304514 GRIN2BQ13224 1484 aa10.83□□□□□ -0.68
RGPD3-201ENST00000304514 DIEXFQ68CQ4 756 aaKnown RBP10.83□□□□□ -0.68
RGPD3-201ENST00000304514 FHOD3Q2V2M9 1422 aa10.82□□□□□ -0.68
RGPD3-201ENST00000304514 ZNF316A6NFI3 1004 aaPredicted RBP10.82□□□□□ -0.68
RGPD3-201ENST00000304514 GAPVD1Q14C86 1478 aa10.82□□□□□ -0.68
RGPD3-201ENST00000304514 PDS5BQ9NTI5 1447 aa10.81□□□□□ -0.68
RGPD3-201ENST00000304514 PHLDB1Q86UU1 1377 aa10.81□□□□□ -0.68
RGPD3-201ENST00000304514 SCAF1Q9H7N4 1312 aaKnown RBP10.81□□□□□ -0.68
RGPD3-201ENST00000304514 ARHGEF11O15085 1522 aa10.8□□□□□ -0.68
RGPD3-201ENST00000304514 WDR62O43379 1518 aa10.8□□□□□ -0.68
RGPD3-201ENST00000304514 SUPT6HQ7KZ85 1726 aaKnown RBP10.79□□□□□ -0.68
RGPD3-201ENST00000304514 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.77□□□□□ -0.69
RGPD3-201ENST00000304514 MRC2Q9UBG0 1479 aa10.77□□□□□ -0.69
RGPD3-201ENST00000304514 GCC2Q8IWJ2 1684 aa10.76□□□□□ -0.69
RGPD3-201ENST00000304514 EHBP1L1Q8N3D4 1523 aa10.76□□□□□ -0.69
RGPD3-201ENST00000304514 MAGI3Q5TCQ9 1506 aa10.76□□□□□ -0.69
RGPD3-201ENST00000304514 HECW1Q76N89 1606 aa10.76□□□□□ -0.69
RGPD3-201ENST00000304514 IQGAP2Q13576 1575 aa10.75□□□□□ -0.69
RGPD3-201ENST00000304514 FMN1Q68DA7 1419 aa10.75□□□□□ -0.69
RGPD3-201ENST00000304514 UGGT2Q9NYU1 1516 aa10.74□□□□□ -0.69
RGPD3-201ENST00000304514 RAB3GAP2Q9H2M9 1393 aa10.74□□□□□ -0.69
RGPD3-201ENST00000304514 DNAJC5BQ9UF47 199 aa10.74□□□□□ -0.69
RGPD3-201ENST00000304514 PTPN23Q9H3S7 1636 aa10.73□□□□□ -0.69
RGPD3-201ENST00000304514 SETD5Q9C0A6 1442 aa10.72□□□□□ -0.69
RGPD3-201ENST00000304514 EIF4G3O43432 1585 aaKnown RBP10.72□□□□□ -0.69
RGPD3-201ENST00000304514 ACIN1Q9UKV3 1341 aaKnown RBP10.72□□□□□ -0.69
RGPD3-201ENST00000304514 TDRD9Q8NDG6 1382 aaKnown RBP10.71□□□□□ -0.69
RGPD3-201ENST00000304514 CCDC18Q5T9S5 1454 aa10.71□□□□□ -0.7
RGPD3-201ENST00000304514 KIAA0556O60303 1618 aa10.7□□□□□ -0.7
RGPD3-201ENST00000304514 FGD6Q6ZV73 1430 aa10.7□□□□□ -0.7
RGPD3-201ENST00000304514 TCOF1Q13428 1488 aaKnown RBP10.69□□□□□ -0.7
RGPD3-201ENST00000304514 NEUROD1Q13562 356 aa10.69□□□□□ -0.7
RGPD3-201ENST00000304514 NCOA2Q15596 1464 aa10.68□□□□□ -0.7
RGPD3-201ENST00000304514 IFT140Q96RY7 1462 aa10.68□□□□□ -0.7
RGPD3-201ENST00000304514 PTPRKQ15262 1439 aa10.66□□□□□ -0.7
RGPD3-201ENST00000304514 ADCY10Q96PN6 1610 aa10.65□□□□□ -0.7
RGPD3-201ENST00000304514 P3H3Q8IVL6 736 aa10.65□□□□□ -0.71
RGPD3-201ENST00000304514 MYOM3Q5VTT5 1437 aa10.64□□□□□ -0.71
RGPD3-201ENST00000304514 CROCC2H7BZ55 1655 aa10.64□□□□□ -0.71
RGPD3-201ENST00000304514 RAPGEF6Q8TEU7 1601 aa10.64□□□□□ -0.71
RGPD3-201ENST00000304514 CEP170Q5SW79 1584 aa10.64□□□□□ -0.71
RGPD3-201ENST00000304514 DISP1Q96F81 1524 aa10.64□□□□□ -0.71
RGPD3-201ENST00000304514 ZNF608Q9ULD9 1512 aaPredicted RBP10.64□□□□□ -0.71
RGPD3-201ENST00000304514 KDM5BQ9UGL1 1544 aa10.63□□□□□ -0.71
RGPD3-201ENST00000304514 KDM6BO15054 1643 aa10.63□□□□□ -0.71
RGPD3-201ENST00000304514 MIER1Q8N108 512 aa10.63□□□□□ -0.71
RGPD3-201ENST00000304514 HFM1A2PYH4 1435 aa10.63□□□□□ -0.71
RGPD3-201ENST00000304514 EPRSP07814 1512 aaKnown RBP10.63□□□□□ -0.71
RGPD3-201ENST00000304514 CDK13Q14004 1512 aaKnown RBP10.61□□□□□ -0.71
RGPD3-201ENST00000304514 ADGBQ8N7X0 1667 aa10.6□□□□□ -0.71
RGPD3-201ENST00000304514 DNMT1P26358 1616 aaKnown RBP10.6□□□□□ -0.71
RGPD3-201ENST00000304514 GRIN2AQ12879 1464 aa10.59□□□□□ -0.71
RGPD3-201ENST00000304514 DENND4BO75064 1496 aaPredicted RBP10.59□□□□□ -0.71
RGPD3-201ENST00000304514 NAIPQ13075 1403 aa10.57□□□□□ -0.72
RGPD3-201ENST00000304514 ITSN2Q9NZM3 1697 aa10.57□□□□□ -0.72
RGPD3-201ENST00000304514 KIAA0586Q9BVV6 1533 aa10.57□□□□□ -0.72
RGPD3-201ENST00000304514 CENPBP07199 599 aaPredicted RBP10.57□□□□□ -0.72
RGPD3-201ENST00000304514 AKNAQ7Z591 1439 aa10.57□□□□□ -0.72
RGPD3-201ENST00000304514 UACAQ9BZF9 1416 aa10.57□□□□□ -0.72
RGPD3-201ENST00000304514 ITGAEP38570 1179 aa10.56□□□□□ -0.72
RGPD3-201ENST00000304514 MAGI1Q96QZ7 1491 aaPredicted RBP10.56□□□□□ -0.72
RGPD3-201ENST00000304514 MTUS2Q5JR59 1369 aa10.55□□□□□ -0.72
RGPD3-201ENST00000304514 FAM50AQ14320 339 aaKnown RBP10.55□□□□□ -0.72
RGPD3-201ENST00000304514 NUP153P49790 1475 aaKnown RBP10.55□□□□□ -0.72
RGPD3-201ENST00000304514 POLR1AO95602 1720 aaPredicted RBP10.54□□□□□ -0.72
RGPD3-201ENST00000304514 MIA2Q96PC5 1412 aa10.54□□□□□ -0.72
RGPD3-201ENST00000304514 GTF3C3Q9Y5Q9 886 aa10.53□□□□□ -0.72
RGPD3-201ENST00000304514 CDC42BPAQ5VT25 1732 aa10.52□□□□□ -0.72
RGPD3-201ENST00000304514 KIF14Q15058 1648 aa10.52□□□□□ -0.73
RGPD3-201ENST00000304514 SYNJ2O15056 1496 aa10.52□□□□□ -0.73
RGPD3-201ENST00000304514 TIMELESSQ9UNS1 1208 aa10.5□□□□□ -0.73
RGPD3-201ENST00000304514 ABCA8O94911 1581 aa10.5□□□□□ -0.73
RGPD3-201ENST00000304514 ATP1B4Q9UN42 357 aaPredicted RBP10.49□□□□□ -0.73
RGPD3-201ENST00000304514 NUP160Q12769 1436 aa10.49□□□□□ -0.73
RGPD3-201ENST00000304514 SIN3AQ96ST3 1273 aa10.49□□□□□ -0.73
RGPD3-201ENST00000304514 DAPK1P53355 1430 aa10.48□□□□□ -0.73
RGPD3-201ENST00000304514 CHD1O14646 1710 aa10.47□□□□□ -0.73
RGPD3-201ENST00000304514 SHROOM2Q13796 1616 aa10.46□□□□□ -0.74
RGPD3-201ENST00000304514 YTHDC1Q96MU7 727 aaKnown RBP10.46□□□□□ -0.74
RGPD3-201ENST00000304514 ROCK1Q13464 1354 aa10.46□□□□□ -0.74
RGPD3-201ENST00000304514 ERCC6Q03468 1493 aa10.45□□□□□ -0.74
RGPD3-201ENST00000304514 CAMSAP2Q08AD1 1489 aa10.45□□□□□ -0.74
RGPD3-201ENST00000304514 ABCC5O15440 1437 aa10.44□□□□□ -0.74
RGPD3-201ENST00000304514 ADGRL2O95490 1459 aa10.43□□□□□ -0.74
RGPD3-201ENST00000304514 PPP1R15AO75807 674 aaPredicted RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms