RNA–Protein interactions for RNA: ENST00000303795.8

APLF-201, Transcript of aprataxin and PNKP like factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APLF, Length 3,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-201ENST00000303795 RRP7BPQ9NSQ0 103 aa16.67■□□□□ 0.26
APLF-201ENST00000303795 VPS8Q8N3P4 1428 aa16.67■□□□□ 0.26
APLF-201ENST00000303795 SALL2Q9Y467 1007 aaPredicted RBP16.64■□□□□ 0.25
APLF-201ENST00000303795 FANCIQ9NVI1 1328 aa16.63■□□□□ 0.25
APLF-201ENST00000303795 SENP3Q9H4L4 574 aaPredicted RBP16.63■□□□□ 0.25
APLF-201ENST00000303795 ANP32CO43423 234 aa16.62■□□□□ 0.25
APLF-201ENST00000303795 BAZ1BQ9UIG0 1483 aaKnown RBP16.59■□□□□ 0.25
APLF-201ENST00000303795 SYNJ1O43426 1573 aa16.58■□□□□ 0.24
APLF-201ENST00000303795 RRBP1Q9P2E9 1410 aaKnown RBP16.57■□□□□ 0.24
APLF-201ENST00000303795 SLC4A1APQ9BWU0 796 aaKnown RBP16.57■□□□□ 0.24
APLF-201ENST00000303795 FAM9BQ8IZU0 186 aa16.57■□□□□ 0.24
APLF-201ENST00000303795 SMARCA4P51532 1647 aa16.55■□□□□ 0.24
APLF-201ENST00000303795 CEP164Q9UPV0 1460 aa16.53■□□□□ 0.24
APLF-201ENST00000303795 HNRNPUQ00839 825 aaKnown RBP eCLIP16.52■□□□□ 0.24
APLF-201ENST00000303795 NBR1Q14596 966 aa16.51■□□□□ 0.23
APLF-201ENST00000303795 WDR97A6NE52 1622 aa16.5■□□□□ 0.23
APLF-201ENST00000303795 FOXD1Q16676 465 aa16.49■□□□□ 0.23
APLF-201ENST00000303795 CDK11AQ9UQ88 783 aaPredicted RBP16.49■□□□□ 0.23
APLF-201ENST00000303795 KDM2AQ9Y2K7 1162 aa16.49■□□□□ 0.23
APLF-201ENST00000303795 ARAP1Q96P48 1450 aa16.48■□□□□ 0.23
APLF-201ENST00000303795 TONSLQ96HA7 1378 aa16.46■□□□□ 0.23
APLF-201ENST00000303795 PPP1R15AO75807 674 aaPredicted RBP16.46■□□□□ 0.23
APLF-201ENST00000303795 RAPGEF2Q9Y4G8 1499 aa16.44■□□□□ 0.22
APLF-201ENST00000303795 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.43■□□□□ 0.22
APLF-201ENST00000303795 MTUS2Q5JR59 1369 aa16.43■□□□□ 0.22
APLF-201ENST00000303795 ATAD2BQ9ULI0 1458 aa16.42■□□□□ 0.22
APLF-201ENST00000303795 ANO8Q9HCE9 1232 aaPredicted RBP16.42■□□□□ 0.22
APLF-201ENST00000303795 RTL5Q5HYW3 569 aaPredicted RBP16.4■□□□□ 0.22
APLF-201ENST00000303795 RTN4Q9NQC3 1192 aaKnown RBP16.37■□□□□ 0.21
APLF-201ENST00000303795 KDM5BQ9UGL1 1544 aa16.35■□□□□ 0.21
APLF-201ENST00000303795 PEG3Q9GZU2 1588 aa16.35■□□□□ 0.21
APLF-201ENST00000303795 KIF27Q86VH2 1401 aa16.34■□□□□ 0.21
APLF-201ENST00000303795 TDRD9Q8NDG6 1382 aaKnown RBP16.34■□□□□ 0.21
APLF-201ENST00000303795 ERICH3Q5RHP9 1530 aa16.33■□□□□ 0.2
APLF-201ENST00000303795 DEKP35659 375 aaKnown RBP16.33■□□□□ 0.2
APLF-201ENST00000303795 RGL3Q3MIN7 710 aa16.33■□□□□ 0.2
APLF-201ENST00000303795 NCAPD3P42695 1498 aa16.32■□□□□ 0.2
APLF-201ENST00000303795 EIF5BO60841 1220 aaKnown RBP16.3■□□□□ 0.2
APLF-201ENST00000303795 BIVM-ERCC5R4GMW8 1640 aa16.3■□□□□ 0.2
APLF-201ENST00000303795 CARMIL1Q5VZK9 1371 aa16.3■□□□□ 0.2
APLF-201ENST00000303795 CCNB3Q8WWL7 1395 aa16.29■□□□□ 0.2
APLF-201ENST00000303795 CCER2I3L3R5 266 aa16.29■□□□□ 0.2
APLF-201ENST00000303795 MRS2Q9HD23 443 aa16.28■□□□□ 0.2
APLF-201ENST00000303795 PRXQ9BXM0 1461 aa16.27■□□□□ 0.19
APLF-201ENST00000303795 NPM2Q86SE8 214 aaKnown RBP16.26■□□□□ 0.19
APLF-201ENST00000303795 CHMP7Q8WUX9 453 aaPredicted RBP16.26■□□□□ 0.19
APLF-201ENST00000303795 CCDC136Q96JN2 1154 aa16.26■□□□□ 0.19
APLF-201ENST00000303795 TOP2BQ02880 1626 aa16.25■□□□□ 0.19
APLF-201ENST00000303795 RAB3GAP2Q9H2M9 1393 aa16.22■□□□□ 0.19
APLF-201ENST00000303795 CHGAP10645 457 aaKnown RBP16.21■□□□□ 0.19
APLF-201ENST00000303795 HMGXB3Q12766 1538 aa16.21■□□□□ 0.18
APLF-201ENST00000303795 ERICH6BQ5W0A0 696 aa16.2■□□□□ 0.18
APLF-201ENST00000303795 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.2■□□□□ 0.18
APLF-201ENST00000303795 PLPPR3Q6T4P5 718 aa16.19■□□□□ 0.18
APLF-201ENST00000303795 MAP3K1Q13233 1512 aa16.18■□□□□ 0.18
APLF-201ENST00000303795 FHOD3Q2V2M9 1422 aa16.18■□□□□ 0.18
APLF-201ENST00000303795 PAK3O75914 559 aaPredicted RBP16.17■□□□□ 0.18
APLF-201ENST00000303795 UBE2Q2Q8WVN8 375 aa16.15■□□□□ 0.18
APLF-201ENST00000303795 CFAP43Q8NDM7 1665 aa16.14■□□□□ 0.17
APLF-201ENST00000303795 EIF4G2P78344 907 aaKnown RBP eCLIP16.14■□□□□ 0.17
APLF-201ENST00000303795 NESP48681 1621 aa16.13■□□□□ 0.17
APLF-201ENST00000303795 TIAM1Q13009 1591 aa16.13■□□□□ 0.17
APLF-201ENST00000303795 WASHC2AQ641Q2 1341 aa16.12■□□□□ 0.17
APLF-201ENST00000303795 ARHGAP35Q9NRY4 1499 aa16.11■□□□□ 0.17
APLF-201ENST00000303795 TMC1Q8TDI8 760 aa16.11■□□□□ 0.17
APLF-201ENST00000303795 CFDP1Q9UEE9 299 aaPredicted RBP16.11■□□□□ 0.17
APLF-201ENST00000303795 POLR1AO95602 1720 aaPredicted RBP16.1■□□□□ 0.17
APLF-201ENST00000303795 NCOA2Q15596 1464 aa16.1■□□□□ 0.17
APLF-201ENST00000303795 B4GALNT3Q6L9W6 998 aa16.09■□□□□ 0.17
APLF-201ENST00000303795 ANP32AP39687 249 aaKnown RBP16.09■□□□□ 0.17
APLF-201ENST00000303795 TSPY4P0CV99 314 aa16.07■□□□□ 0.16
APLF-201ENST00000303795 TSPY10P0CW01 314 aa16.07■□□□□ 0.16
APLF-201ENST00000303795 IL27Q8NEV9 243 aa16.06■□□□□ 0.16
APLF-201ENST00000303795 HSPA5P11021 654 aaKnown RBP16.06■□□□□ 0.16
APLF-201ENST00000303795 ABCA5Q8WWZ7 1642 aa16.05■□□□□ 0.16
APLF-201ENST00000303795 SETD5Q9C0A6 1442 aa16.04■□□□□ 0.16
APLF-201ENST00000303795 ZBTB47Q9UFB7 747 aaPredicted RBP16.03■□□□□ 0.16
APLF-201ENST00000303795 DAXXQ9UER7 740 aaPredicted RBP16.03■□□□□ 0.16
APLF-201ENST00000303795 NOP58Q9Y2X3 529 aaKnown RBP16.03■□□□□ 0.16
APLF-201ENST00000303795 RAD54L2Q9Y4B4 1467 aa16.02■□□□□ 0.16
APLF-201ENST00000303795 WASHC2CQ9Y4E1 1318 aa16.01■□□□□ 0.15
APLF-201ENST00000303795 C11orf95C9JLR9 678 aaPredicted RBP16■□□□□ 0.15
APLF-201ENST00000303795 TIMELESSQ9UNS1 1208 aa16■□□□□ 0.15
APLF-201ENST00000303795 ZNF644Q9H582 1327 aaPredicted RBP16■□□□□ 0.15
APLF-201ENST00000303795 L3MBTL2Q969R5 705 aa15.99■□□□□ 0.15
APLF-201ENST00000303795 IGF1RP08069 1367 aa15.99■□□□□ 0.15
APLF-201ENST00000303795 RNF123Q5XPI4 1314 aa15.99■□□□□ 0.15
APLF-201ENST00000303795 PLEKHD1A6NEE1 506 aa15.98■□□□□ 0.15
APLF-201ENST00000303795 DENND4BO75064 1496 aaPredicted RBP15.97■□□□□ 0.15
APLF-201ENST00000303795 DCAF11Q8TEB1 546 aa15.97■□□□□ 0.15
APLF-201ENST00000303795 CARD11Q9BXL7 1154 aa15.97■□□□□ 0.15
APLF-201ENST00000303795 PPP4R2Q9NY27 417 aa15.97■□□□□ 0.15
APLF-201ENST00000303795 CADPSQ9ULU8 1353 aa15.97■□□□□ 0.15
APLF-201ENST00000303795 CC2D1BQ5T0F9 858 aaKnown RBP15.97■□□□□ 0.15
APLF-201ENST00000303795 LAS1LQ9Y4W2 734 aaKnown RBP15.97■□□□□ 0.15
APLF-201ENST00000303795 PHLDB1Q86UU1 1377 aa15.96■□□□□ 0.15
APLF-201ENST00000303795 TNNT2P45379 298 aaPredicted RBP15.95■□□□□ 0.14
APLF-201ENST00000303795 LRRC9Q6ZRR7 1453 aa15.95■□□□□ 0.14
APLF-201ENST00000303795 MPHOSPH9Q99550 1183 aa15.95■□□□□ 0.14
APLF-201ENST00000303795 PLEKHG5O94827 1062 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms