RNA–Protein interactions for RNA: ENST00000303757.12

LST1-202, leukocyte specific transcript 1, humanhuman

TSL 1 (best) BASIC

Gene LST1, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-202ENST00000303757 SYNJ2O15056 1496 aa28.98■■■□□ 2.23
LST1-202ENST00000303757 PBRM1Q86U86 1689 aa28.96■■■□□ 2.23
LST1-202ENST00000303757 GAPVD1Q14C86 1478 aa28.91■■■□□ 2.22
LST1-202ENST00000303757 ERCC6L2Q5T890 1561 aa28.79■■■□□ 2.2
LST1-202ENST00000303757 ABCA5Q8WWZ7 1642 aa28.76■■■□□ 2.2
LST1-202ENST00000303757 ABCA10Q8WWZ4 1543 aa28.72■■■□□ 2.19
LST1-202ENST00000303757 DCAF8L1A6NGE4 600 aa28.68■■■□□ 2.18
LST1-202ENST00000303757 GRIN2AQ12879 1464 aa28.66■■■□□ 2.18
LST1-202ENST00000303757 CEP170Q5SW79 1584 aa28.63■■■□□ 2.17
LST1-202ENST00000303757 ADAMTS12P58397 1594 aa28.59■■■□□ 2.17
LST1-202ENST00000303757 NUP160Q12769 1436 aa28.54■■■□□ 2.16
LST1-202ENST00000303757 KIF13AQ9H1H9 1805 aa28.52■■■□□ 2.16
LST1-202ENST00000303757 SHROOM2Q13796 1616 aa28.51■■■□□ 2.15
LST1-202ENST00000303757 WRNQ14191 1432 aaPredicted RBP eCLIP28.5■■■□□ 2.15
LST1-202ENST00000303757 SUPT5HO00267 1087 aaKnown RBP28.45■■■□□ 2.14
LST1-202ENST00000303757 FHAD1B1AJZ9 1412 aa28.44■■■□□ 2.14
LST1-202ENST00000303757 BIVM-ERCC5R4GMW8 1640 aa28.41■■■□□ 2.14
LST1-202ENST00000303757 TOP2BQ02880 1626 aa28.4■■■□□ 2.14
LST1-202ENST00000303757 PRG4Q92954 1404 aaPredicted RBP28.38■■■□□ 2.13
LST1-202ENST00000303757 ERICH3Q5RHP9 1530 aa28.33■■■□□ 2.13
LST1-202ENST00000303757 JPH4Q96JJ6 628 aa28.3■■■□□ 2.12
LST1-202ENST00000303757 FAM69CQ0P6D2 419 aa28.28■■■□□ 2.12
LST1-202ENST00000303757 RUSC2Q8N2Y8 1516 aa28.21■■■□□ 2.11
LST1-202ENST00000303757 ABCC10Q5T3U5 1492 aa28.2■■■□□ 2.1
LST1-202ENST00000303757 NPM1P06748 294 aaKnown RBP eCLIP28.19■■■□□ 2.1
LST1-202ENST00000303757 DIP2BQ9P265 1576 aa28.16■■■□□ 2.1
LST1-202ENST00000303757 TSPOAP1O95153 1857 aa28.15■■■□□ 2.1
LST1-202ENST00000303757 ADCY10Q96PN6 1610 aa28.15■■■□□ 2.1
LST1-202ENST00000303757 MAPKBP1O60336 1514 aa28.13■■■□□ 2.09
LST1-202ENST00000303757 KDM6BO15054 1643 aa28.08■■■□□ 2.09
LST1-202ENST00000303757 KDM4FA0A1W2PPD8 638 aa28.04■■■□□ 2.08
LST1-202ENST00000303757 TTBK1Q5TCY1 1321 aaPredicted RBP27.99■■■□□ 2.07
LST1-202ENST00000303757 SLC4A1APQ9BWU0 796 aaKnown RBP27.96■■■□□ 2.07
LST1-202ENST00000303757 KIAA0586Q9BVV6 1533 aa27.95■■■□□ 2.06
LST1-202ENST00000303757 IGF1RP08069 1367 aa27.88■■■□□ 2.05
LST1-202ENST00000303757 CUL7Q14999 1698 aa27.86■■■□□ 2.05
LST1-202ENST00000303757 PTPRGP23470 1445 aa27.84■■■□□ 2.05
LST1-202ENST00000303757 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.84■■■□□ 2.05
LST1-202ENST00000303757 KIF27Q86VH2 1401 aa27.81■■■□□ 2.04
LST1-202ENST00000303757 RNF39Q9H2S5 420 aa27.8■■■□□ 2.04
LST1-202ENST00000303757 ILDR1Q86SU0 546 aaPredicted RBP27.79■■■□□ 2.04
LST1-202ENST00000303757 PPRC1Q5VV67 1664 aaKnown RBP27.78■■■□□ 2.04
LST1-202ENST00000303757 ASXL2Q76L83 1435 aa27.75■■■□□ 2.03
LST1-202ENST00000303757 ABCC2Q92887 1545 aa27.74■■■□□ 2.03
LST1-202ENST00000303757 SLC4A2P04920 1241 aa27.74■■■□□ 2.03
LST1-202ENST00000303757 TNIKQ9UKE5 1360 aa27.73■■■□□ 2.03
LST1-202ENST00000303757 CARMIL2Q6F5E8 1435 aa27.7■■■□□ 2.03
LST1-202ENST00000303757 CARMIL1Q5VZK9 1371 aa27.7■■■□□ 2.02
LST1-202ENST00000303757 ADGRL1O94910 1474 aa27.7■■■□□ 2.02
LST1-202ENST00000303757 PLB1Q6P1J6 1458 aa27.67■■■□□ 2.02
LST1-202ENST00000303757 GLI2P10070 1586 aa27.67■■■□□ 2.02
LST1-202ENST00000303757 IQGAP2Q13576 1575 aa27.65■■■□□ 2.02
LST1-202ENST00000303757 COL17A1Q9UMD9 1497 aaPredicted RBP27.62■■■□□ 2.01
LST1-202ENST00000303757 UACAQ9BZF9 1416 aa27.6■■■□□ 2.01
LST1-202ENST00000303757 UHRF1BP1LA0JNW5 1464 aa27.58■■■□□ 2.01
LST1-202ENST00000303757 DISP1Q96F81 1524 aa27.57■■■□□ 2
LST1-202ENST00000303757 EPRSP07814 1512 aaKnown RBP27.56■■■□□ 2
LST1-202ENST00000303757 MAP3K4Q9Y6R4 1608 aa27.56■■■□□ 2
LST1-202ENST00000303757 ZCCHC11Q5TAX3 1644 aaKnown RBP27.53■■■□□ 2
LST1-202ENST00000303757 HECW2Q9P2P5 1572 aa27.51■■□□□ 1.99
LST1-202ENST00000303757 KDM5BQ9UGL1 1544 aa27.5■■□□□ 1.99
LST1-202ENST00000303757 TEX14Q8IWB6 1497 aa27.46■■□□□ 1.99
LST1-202ENST00000303757 U3KPZ7 1027 aaPredicted RBP27.44■■□□□ 1.98
LST1-202ENST00000303757 KIAA0556O60303 1618 aa27.43■■□□□ 1.98
LST1-202ENST00000303757 UGGT2Q9NYU1 1516 aa27.41■■□□□ 1.98
LST1-202ENST00000303757 C1QBPQ07021 282 aaKnown RBP27.4■■□□□ 1.98
LST1-202ENST00000303757 RAPGEF2Q9Y4G8 1499 aa27.37■■□□□ 1.97
LST1-202ENST00000303757 WDR7Q9Y4E6 1490 aa27.36■■□□□ 1.97
LST1-202ENST00000303757 KCNH8Q96L42 1107 aa27.32■■□□□ 1.96
LST1-202ENST00000303757 CFAP43Q8NDM7 1665 aa27.27■■□□□ 1.96
LST1-202ENST00000303757 CD109Q6YHK3 1445 aa27.26■■□□□ 1.95
LST1-202ENST00000303757 CACNB1Q02641 598 aaPredicted RBP27.26■■□□□ 1.95
LST1-202ENST00000303757 CTTNBP2Q8WZ74 1663 aa27.26■■□□□ 1.95
LST1-202ENST00000303757 KIF21BO75037 1637 aa27.25■■□□□ 1.95
LST1-202ENST00000303757 MAGI3Q5TCQ9 1506 aa27.21■■□□□ 1.95
LST1-202ENST00000303757 FOXD4L1Q9NU39 408 aa27.21■■□□□ 1.95
LST1-202ENST00000303757 ABCA8O94911 1581 aa27.19■■□□□ 1.94
LST1-202ENST00000303757 ARID3CA6NKF2 412 aa27.17■■□□□ 1.94
LST1-202ENST00000303757 ZBTB22O15209 634 aa27.17■■□□□ 1.94
LST1-202ENST00000303757 GOLGA3Q08378 1498 aa27.13■■□□□ 1.93
LST1-202ENST00000303757 P3H3Q8IVL6 736 aa27.04■■□□□ 1.92
LST1-202ENST00000303757 ARAP3Q8WWN8 1544 aa27.01■■□□□ 1.91
LST1-202ENST00000303757 MYCNP04198 464 aaPredicted RBP27.01■■□□□ 1.91
LST1-202ENST00000303757 FBXO41Q8TF61 875 aa27■■□□□ 1.91
LST1-202ENST00000303757 ADAMTSL3P82987 1691 aa26.98■■□□□ 1.91
LST1-202ENST00000303757 RAPGEF3O95398 923 aa26.97■■□□□ 1.91
LST1-202ENST00000303757 ATP10BO94823 1461 aa26.97■■□□□ 1.91
LST1-202ENST00000303757 PTPRMP28827 1452 aa26.97■■□□□ 1.91
LST1-202ENST00000303757 ABCA9Q8IUA7 1624 aa26.94■■□□□ 1.9
LST1-202ENST00000303757 PRXQ9BXM0 1461 aa26.93■■□□□ 1.9
LST1-202ENST00000303757 ARID4BQ4LE39 1312 aaPredicted RBP26.89■■□□□ 1.89
LST1-202ENST00000303757 MADDQ8WXG6 1647 aa26.88■■□□□ 1.89
LST1-202ENST00000303757 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.88■■□□□ 1.89
LST1-202ENST00000303757 HNRNPUL2Q1KMD3 747 aaKnown RBP26.88■■□□□ 1.89
LST1-202ENST00000303757 FAM9AQ8IZU1 332 aaPredicted RBP26.88■■□□□ 1.89
LST1-202ENST00000303757 BCORL1Q5H9F3 1711 aa26.87■■□□□ 1.89
LST1-202ENST00000303757 FRMPD1Q5SYB0 1578 aa26.85■■□□□ 1.89
LST1-202ENST00000303757 PHLDB1Q86UU1 1377 aa26.83■■□□□ 1.88
LST1-202ENST00000303757 RAPGEF6Q8TEU7 1601 aa26.83■■□□□ 1.88
LST1-202ENST00000303757 PCF11O94913 1555 aaKnown RBP26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms