RNA–Protein interactions for RNA: ENST00000302631.7

SCAMP3-201, Transcript of secretory carrier membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP3, Length 1,446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-201ENST00000302631 GOLGA3Q08378 1498 aa32.94■■■□□ 2.86
SCAMP3-201ENST00000302631 DNAJC5Q9H3Z4 198 aa32.94■■■□□ 2.86
SCAMP3-201ENST00000302631 SHROOM2Q13796 1616 aa32.92■■■□□ 2.86
SCAMP3-201ENST00000302631 IQGAP2Q13576 1575 aa32.88■■■□□ 2.85
SCAMP3-201ENST00000302631 JPH4Q96JJ6 628 aa32.84■■■□□ 2.85
SCAMP3-201ENST00000302631 UGGT2Q9NYU1 1516 aa32.77■■■□□ 2.84
SCAMP3-201ENST00000302631 ARHGEF11O15085 1522 aa32.74■■■□□ 2.83
SCAMP3-201ENST00000302631 UBTFP17480 764 aaKnown RBP32.72■■■□□ 2.83
SCAMP3-201ENST00000302631 PRG4Q92954 1404 aaPredicted RBP32.71■■■□□ 2.83
SCAMP3-201ENST00000302631 EHMT2Q96KQ7 1210 aa32.7■■■□□ 2.83
SCAMP3-201ENST00000302631 RIMBP3CA6NJZ7 1639 aa32.7■■■□□ 2.83
SCAMP3-201ENST00000302631 RIMBP3BA6NNM3 1639 aa32.7■■■□□ 2.83
SCAMP3-201ENST00000302631 RIMBP3Q9UFD9 1639 aa32.7■■■□□ 2.83
SCAMP3-201ENST00000302631 ERCC6L2Q5T890 1561 aa32.69■■■□□ 2.82
SCAMP3-201ENST00000302631 TNIKQ9UKE5 1360 aa32.66■■■□□ 2.82
SCAMP3-201ENST00000302631 DISP1Q96F81 1524 aa32.65■■■□□ 2.82
SCAMP3-201ENST00000302631 LOC105371045A0A1W2PR82 267 aa32.6■■■□□ 2.81
SCAMP3-201ENST00000302631 CARMIL2Q6F5E8 1435 aa32.59■■■□□ 2.81
SCAMP3-201ENST00000302631 KIAA0556O60303 1618 aa32.58■■■□□ 2.81
SCAMP3-201ENST00000302631 SAMD9Q5K651 1589 aa32.57■■■□□ 2.8
SCAMP3-201ENST00000302631 ARAP1Q96P48 1450 aa32.52■■■□□ 2.8
SCAMP3-201ENST00000302631 EFCAB5A4FU69 1503 aa32.5■■■□□ 2.79
SCAMP3-201ENST00000302631 ARHGAP35Q9NRY4 1499 aa32.41■■■□□ 2.78
SCAMP3-201ENST00000302631 PTPRGP23470 1445 aa32.38■■■□□ 2.77
SCAMP3-201ENST00000302631 RANGAP1P46060 587 aaPredicted RBP32.38■■■□□ 2.77
SCAMP3-201ENST00000302631 CYB5RLQ6IPT4 315 aa32.34■■■□□ 2.77
SCAMP3-201ENST00000302631 CLIP1P30622 1438 aa32.34■■■□□ 2.77
SCAMP3-201ENST00000302631 P3H3Q8IVL6 736 aa32.34■■■□□ 2.77
SCAMP3-201ENST00000302631 CEP162Q5TB80 1403 aa32.33■■■□□ 2.77
SCAMP3-201ENST00000302631 FHOD3Q2V2M9 1422 aa32.31■■■□□ 2.76
SCAMP3-201ENST00000302631 ABCA8O94911 1581 aa32.22■■■□□ 2.75
SCAMP3-201ENST00000302631 UACAQ9BZF9 1416 aa32.21■■■□□ 2.75
SCAMP3-201ENST00000302631 UHRF1BP1LA0JNW5 1464 aa32.21■■■□□ 2.75
SCAMP3-201ENST00000302631 TTBK1Q5TCY1 1321 aaPredicted RBP32.18■■■□□ 2.74
SCAMP3-201ENST00000302631 ADCY10Q96PN6 1610 aa32.18■■■□□ 2.74
SCAMP3-201ENST00000302631 PLB1Q6P1J6 1458 aa32.17■■■□□ 2.74
SCAMP3-201ENST00000302631 FMN1Q68DA7 1419 aa32.17■■■□□ 2.74
SCAMP3-201ENST00000302631 ABCC2Q92887 1545 aa32.16■■■□□ 2.74
SCAMP3-201ENST00000302631 RAPGEF6Q8TEU7 1601 aa32.12■■■□□ 2.73
SCAMP3-201ENST00000302631 KDM5BQ9UGL1 1544 aa32.05■■■□□ 2.72
SCAMP3-201ENST00000302631 NUP153P49790 1475 aaKnown RBP32■■■□□ 2.71
SCAMP3-201ENST00000302631 CASKIN1Q8WXD9 1431 aa31.99■■■□□ 2.71
SCAMP3-201ENST00000302631 PCF11O94913 1555 aaKnown RBP31.96■■■□□ 2.71
SCAMP3-201ENST00000302631 ZCCHC11Q5TAX3 1644 aaKnown RBP31.95■■■□□ 2.71
SCAMP3-201ENST00000302631 HECW1Q76N89 1606 aa31.95■■■□□ 2.71
SCAMP3-201ENST00000302631 ATP10BO94823 1461 aa31.93■■■□□ 2.7
SCAMP3-201ENST00000302631 FYCO1Q9BQS8 1478 aa31.93■■■□□ 2.7
SCAMP3-201ENST00000302631 VPS8Q8N3P4 1428 aa31.93■■■□□ 2.7
SCAMP3-201ENST00000302631 NPM1P06748 294 aaKnown RBP eCLIP31.92■■■□□ 2.7
SCAMP3-201ENST00000302631 MAPKBP1O60336 1514 aa31.9■■■□□ 2.7
SCAMP3-201ENST00000302631 LRRIQ1Q96JM4 1722 aa31.89■■■□□ 2.7
SCAMP3-201ENST00000302631 EPRSP07814 1512 aaKnown RBP31.87■■■□□ 2.69
SCAMP3-201ENST00000302631 CCDC18Q5T9S5 1454 aa31.8■■■□□ 2.68
SCAMP3-201ENST00000302631 CDK13Q14004 1512 aaKnown RBP31.79■■■□□ 2.68
SCAMP3-201ENST00000302631 ASXL2Q76L83 1435 aa31.78■■■□□ 2.68
SCAMP3-201ENST00000302631 ATP1B4Q9UN42 357 aaPredicted RBP31.77■■■□□ 2.68
SCAMP3-201ENST00000302631 ARID3CA6NKF2 412 aa31.76■■■□□ 2.68
SCAMP3-201ENST00000302631 WDR7Q9Y4E6 1490 aa31.71■■■□□ 2.67
SCAMP3-201ENST00000302631 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.67■■■□□ 2.66
SCAMP3-201ENST00000302631 HNRNPUL2Q1KMD3 747 aaKnown RBP31.67■■■□□ 2.66
SCAMP3-201ENST00000302631 MAP3K1Q13233 1512 aa31.67■■■□□ 2.66
SCAMP3-201ENST00000302631 ABCC10Q5T3U5 1492 aa31.66■■■□□ 2.66
SCAMP3-201ENST00000302631 CFAP43Q8NDM7 1665 aa31.65■■■□□ 2.66
SCAMP3-201ENST00000302631 PLEKHD1A6NEE1 506 aa31.65■■■□□ 2.66
SCAMP3-201ENST00000302631 DIP2BQ9P265 1576 aa31.63■■■□□ 2.65
SCAMP3-201ENST00000302631 CDK11AQ9UQ88 783 aaPredicted RBP31.63■■■□□ 2.65
SCAMP3-201ENST00000302631 KIF13AQ9H1H9 1805 aa31.62■■■□□ 2.65
SCAMP3-201ENST00000302631 TIAM1Q13009 1591 aa31.62■■■□□ 2.65
SCAMP3-201ENST00000302631 GLI2P10070 1586 aa31.61■■■□□ 2.65
SCAMP3-201ENST00000302631 MAGI3Q5TCQ9 1506 aa31.6■■■□□ 2.65
SCAMP3-201ENST00000302631 TROQ12816 1431 aaPredicted RBP31.58■■■□□ 2.65
SCAMP3-201ENST00000302631 FAM69CQ0P6D2 419 aa31.5■■■□□ 2.63
SCAMP3-201ENST00000302631 KCNH8Q96L42 1107 aa31.5■■■□□ 2.63
SCAMP3-201ENST00000302631 ABCA9Q8IUA7 1624 aa31.49■■■□□ 2.63
SCAMP3-201ENST00000302631 EHBP1L1Q8N3D4 1523 aa31.48■■■□□ 2.63
SCAMP3-201ENST00000302631 LRRC9Q6ZRR7 1453 aa31.47■■■□□ 2.63
SCAMP3-201ENST00000302631 MAP3K4Q9Y6R4 1608 aa31.46■■■□□ 2.63
SCAMP3-201ENST00000302631 MTUS2Q5JR59 1369 aa31.46■■■□□ 2.63
SCAMP3-201ENST00000302631 KIF14Q15058 1648 aa31.45■■■□□ 2.63
SCAMP3-201ENST00000302631 APLP2Q06481 763 aa31.45■■■□□ 2.63
SCAMP3-201ENST00000302631 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.45■■■□□ 2.62
SCAMP3-201ENST00000302631 TRHP20396 242 aaPredicted RBP31.44■■■□□ 2.62
SCAMP3-201ENST00000302631 KANK4Q5T7N3 995 aaPredicted RBP31.42■■■□□ 2.62
SCAMP3-201ENST00000302631 TTC37Q6PGP7 1564 aa31.38■■■□□ 2.61
SCAMP3-201ENST00000302631 CD109Q6YHK3 1445 aa31.36■■■□□ 2.61
SCAMP3-201ENST00000302631 PPRC1Q5VV67 1664 aaKnown RBP31.35■■■□□ 2.61
SCAMP3-201ENST00000302631 SUPT6HQ7KZ85 1726 aaKnown RBP31.35■■■□□ 2.61
SCAMP3-201ENST00000302631 TSPOAP1O95153 1857 aa31.3■■■□□ 2.6
SCAMP3-201ENST00000302631 MYO5CQ9NQX4 1742 aa31.29■■■□□ 2.6
SCAMP3-201ENST00000302631 NCOA2Q15596 1464 aa31.28■■■□□ 2.6
SCAMP3-201ENST00000302631 ARAP3Q8WWN8 1544 aa31.28■■■□□ 2.6
SCAMP3-201ENST00000302631 PLCH2O75038 1416 aa31.27■■■□□ 2.6
SCAMP3-201ENST00000302631 CDC42BPAQ5VT25 1732 aa31.26■■■□□ 2.59
SCAMP3-201ENST00000302631 CDC42BPBQ9Y5S2 1711 aa31.23■■■□□ 2.59
SCAMP3-201ENST00000302631 GPATCH8Q9UKJ3 1502 aaKnown RBP31.23■■■□□ 2.59
SCAMP3-201ENST00000302631 PREX2Q70Z35 1606 aa31.23■■■□□ 2.59
SCAMP3-201ENST00000302631 TEX14Q8IWB6 1497 aa31.22■■■□□ 2.59
SCAMP3-201ENST00000302631 CCNB3Q8WWL7 1395 aa31.19■■■□□ 2.58
SCAMP3-201ENST00000302631 ITSN2Q9NZM3 1697 aa31.17■■■□□ 2.58
SCAMP3-201ENST00000302631 NEO1Q92859 1461 aa31.15■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms