RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 CYB5RLQ6IPT4 315 aa19.55■□□□□ 0.72
CLCC1-201ENST00000302500 KIAA0586Q9BVV6 1533 aa19.51■□□□□ 0.71
CLCC1-201ENST00000302500 CARMIL1Q5VZK9 1371 aa19.5■□□□□ 0.71
CLCC1-201ENST00000302500 PRG4Q92954 1404 aaPredicted RBP19.45■□□□□ 0.7
CLCC1-201ENST00000302500 JPH4Q96JJ6 628 aa19.43■□□□□ 0.7
CLCC1-201ENST00000302500 PRXQ9BXM0 1461 aa19.41■□□□□ 0.7
CLCC1-201ENST00000302500 RAPGEF2Q9Y4G8 1499 aa19.4■□□□□ 0.7
CLCC1-201ENST00000302500 IQGAP2Q13576 1575 aa19.38■□□□□ 0.69
CLCC1-201ENST00000302500 DISP1Q96F81 1524 aa19.34■□□□□ 0.69
CLCC1-201ENST00000302500 UGGT2Q9NYU1 1516 aa19.34■□□□□ 0.69
CLCC1-201ENST00000302500 ADCY10Q96PN6 1610 aa19.33■□□□□ 0.68
CLCC1-201ENST00000302500 CTTNBP2Q8WZ74 1663 aa19.32■□□□□ 0.68
CLCC1-201ENST00000302500 KIAA0556O60303 1618 aa19.25■□□□□ 0.67
CLCC1-201ENST00000302500 KIF13AQ9H1H9 1805 aa19.24■□□□□ 0.67
CLCC1-201ENST00000302500 MAPKBP1O60336 1514 aa19.22■□□□□ 0.67
CLCC1-201ENST00000302500 EEA1Q15075 1411 aa19.2■□□□□ 0.66
CLCC1-201ENST00000302500 TNIKQ9UKE5 1360 aa19.18■□□□□ 0.66
CLCC1-201ENST00000302500 UHRF1BP1LA0JNW5 1464 aa19.16■□□□□ 0.66
CLCC1-201ENST00000302500 CARMIL2Q6F5E8 1435 aa19.16■□□□□ 0.66
CLCC1-201ENST00000302500 PTPRGP23470 1445 aa19.15■□□□□ 0.66
CLCC1-201ENST00000302500 KIF21BO75037 1637 aa19.14■□□□□ 0.65
CLCC1-201ENST00000302500 CSRNP3Q8WYN3 585 aa19.14■□□□□ 0.65
CLCC1-201ENST00000302500 SAMD9Q5K651 1589 aa19.12■□□□□ 0.65
CLCC1-201ENST00000302500 DIP2BQ9P265 1576 aa19.12■□□□□ 0.65
CLCC1-201ENST00000302500 ABCC2Q92887 1545 aa19.12■□□□□ 0.65
CLCC1-201ENST00000302500 ABCC10Q5T3U5 1492 aa19.11■□□□□ 0.65
CLCC1-201ENST00000302500 ABCA8O94911 1581 aa19.08■□□□□ 0.65
CLCC1-201ENST00000302500 KDM5BQ9UGL1 1544 aa19.08■□□□□ 0.65
CLCC1-201ENST00000302500 TRHP20396 242 aaPredicted RBP19.07■□□□□ 0.64
CLCC1-201ENST00000302500 UACAQ9BZF9 1416 aa19.07■□□□□ 0.64
CLCC1-201ENST00000302500 GOLGA3Q08378 1498 aa19.05■□□□□ 0.64
CLCC1-201ENST00000302500 ZCCHC11Q5TAX3 1644 aaKnown RBP19.03■□□□□ 0.64
CLCC1-201ENST00000302500 PLB1Q6P1J6 1458 aa19.02■□□□□ 0.64
CLCC1-201ENST00000302500 PPRC1Q5VV67 1664 aaKnown RBP18.99■□□□□ 0.63
CLCC1-201ENST00000302500 GLI2P10070 1586 aa18.98■□□□□ 0.63
CLCC1-201ENST00000302500 ASXL2Q76L83 1435 aa18.97■□□□□ 0.63
CLCC1-201ENST00000302500 MAP3K4Q9Y6R4 1608 aa18.92■□□□□ 0.62
CLCC1-201ENST00000302500 EPRSP07814 1512 aaKnown RBP18.91■□□□□ 0.62
CLCC1-201ENST00000302500 FAM9AQ8IZU1 332 aaPredicted RBP18.9■□□□□ 0.62
CLCC1-201ENST00000302500 EFCAB5A4FU69 1503 aa18.9■□□□□ 0.62
CLCC1-201ENST00000302500 NPM1P06748 294 aaKnown RBP eCLIP18.88■□□□□ 0.61
CLCC1-201ENST00000302500 RAPGEF6Q8TEU7 1601 aa18.88■□□□□ 0.61
CLCC1-201ENST00000302500 TTBK1Q5TCY1 1321 aaPredicted RBP18.87■□□□□ 0.61
CLCC1-201ENST00000302500 FAM69CQ0P6D2 419 aa18.87■□□□□ 0.61
CLCC1-201ENST00000302500 WDR7Q9Y4E6 1490 aa18.86■□□□□ 0.61
CLCC1-201ENST00000302500 TSPOAP1O95153 1857 aa18.85■□□□□ 0.61
CLCC1-201ENST00000302500 ATP10BO94823 1461 aa18.85■□□□□ 0.61
CLCC1-201ENST00000302500 NUP153P49790 1475 aaKnown RBP18.85■□□□□ 0.61
CLCC1-201ENST00000302500 FHOD3Q2V2M9 1422 aa18.84■□□□□ 0.61
CLCC1-201ENST00000302500 ARHGAP35Q9NRY4 1499 aa18.82■□□□□ 0.6
CLCC1-201ENST00000302500 P3H3Q8IVL6 736 aa18.78■□□□□ 0.6
CLCC1-201ENST00000302500 CFAP43Q8NDM7 1665 aa18.78■□□□□ 0.6
CLCC1-201ENST00000302500 COL17A1Q9UMD9 1497 aaPredicted RBP18.76■□□□□ 0.59
CLCC1-201ENST00000302500 KDM6BO15054 1643 aa18.75■□□□□ 0.59
CLCC1-201ENST00000302500 ABCA9Q8IUA7 1624 aa18.75■□□□□ 0.59
CLCC1-201ENST00000302500 LRRIQ1Q96JM4 1722 aa18.73■□□□□ 0.59
CLCC1-201ENST00000302500 MAGI3Q5TCQ9 1506 aa18.73■□□□□ 0.59
CLCC1-201ENST00000302500 CDK13Q14004 1512 aaKnown RBP18.65■□□□□ 0.58
CLCC1-201ENST00000302500 TEX14Q8IWB6 1497 aa18.65■□□□□ 0.58
CLCC1-201ENST00000302500 UBTFP17480 764 aaKnown RBP18.64■□□□□ 0.57
CLCC1-201ENST00000302500 FMN1Q68DA7 1419 aa18.63■□□□□ 0.57
CLCC1-201ENST00000302500 CD109Q6YHK3 1445 aa18.63■□□□□ 0.57
CLCC1-201ENST00000302500 HECW1Q76N89 1606 aa18.63■□□□□ 0.57
CLCC1-201ENST00000302500 RANGAP1P46060 587 aaPredicted RBP18.61■□□□□ 0.57
CLCC1-201ENST00000302500 PCF11O94913 1555 aaKnown RBP18.59■□□□□ 0.57
CLCC1-201ENST00000302500 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.59■□□□□ 0.57
CLCC1-201ENST00000302500 ARID3CA6NKF2 412 aa18.59■□□□□ 0.57
CLCC1-201ENST00000302500 EHMT2Q96KQ7 1210 aa18.59■□□□□ 0.57
CLCC1-201ENST00000302500 TTC37Q6PGP7 1564 aa18.59■□□□□ 0.57
CLCC1-201ENST00000302500 ARAP3Q8WWN8 1544 aa18.58■□□□□ 0.57
CLCC1-201ENST00000302500 FRMPD1Q5SYB0 1578 aa18.56■□□□□ 0.56
CLCC1-201ENST00000302500 CASKIN1Q8WXD9 1431 aa18.55■□□□□ 0.56
CLCC1-201ENST00000302500 KCNH8Q96L42 1107 aa18.54■□□□□ 0.56
CLCC1-201ENST00000302500 KIF14Q15058 1648 aa18.52■□□□□ 0.56
CLCC1-201ENST00000302500 CLIP1P30622 1438 aa18.52■□□□□ 0.56
CLCC1-201ENST00000302500 NEO1Q92859 1461 aa18.52■□□□□ 0.55
CLCC1-201ENST00000302500 FYCO1Q9BQS8 1478 aa18.5■□□□□ 0.55
CLCC1-201ENST00000302500 RICTORQ6R327 1708 aa18.49■□□□□ 0.55
CLCC1-201ENST00000302500 PHLDB1Q86UU1 1377 aa18.46■□□□□ 0.55
CLCC1-201ENST00000302500 TROQ12816 1431 aaPredicted RBP18.46■□□□□ 0.55
CLCC1-201ENST00000302500 CCDC18Q5T9S5 1454 aa18.45■□□□□ 0.54
CLCC1-201ENST00000302500 PLEKHD1A6NEE1 506 aa18.45■□□□□ 0.54
CLCC1-201ENST00000302500 MYO5CQ9NQX4 1742 aa18.44■□□□□ 0.54
CLCC1-201ENST00000302500 CEP162Q5TB80 1403 aa18.43■□□□□ 0.54
CLCC1-201ENST00000302500 CFAP74Q9C0B2 1584 aa18.43■□□□□ 0.54
CLCC1-201ENST00000302500 PLCH2O75038 1416 aa18.42■□□□□ 0.54
CLCC1-201ENST00000302500 KDM4FA0A1W2PPD8 638 aa18.42■□□□□ 0.54
CLCC1-201ENST00000302500 FANCAO15360 1455 aa18.42■□□□□ 0.54
CLCC1-201ENST00000302500 CDC42BPBQ9Y5S2 1711 aa18.41■□□□□ 0.54
CLCC1-201ENST00000302500 ZMYM4Q5VZL5 1548 aa18.4■□□□□ 0.54
CLCC1-201ENST00000302500 AKNAQ7Z591 1439 aa18.38■□□□□ 0.53
CLCC1-201ENST00000302500 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.38■□□□□ 0.53
CLCC1-201ENST00000302500 HNRNPUL2Q1KMD3 747 aaKnown RBP18.38■□□□□ 0.53
CLCC1-201ENST00000302500 PREX2Q70Z35 1606 aa18.38■□□□□ 0.53
CLCC1-201ENST00000302500 CDC42BPAQ5VT25 1732 aa18.37■□□□□ 0.53
CLCC1-201ENST00000302500 SIGLEC1Q9BZZ2 1709 aa18.36■□□□□ 0.53
CLCC1-201ENST00000302500 ADGRL1O94910 1474 aa18.35■□□□□ 0.53
CLCC1-201ENST00000302500 ARHGEF40Q8TER5 1519 aa18.33■□□□□ 0.53
CLCC1-201ENST00000302500 LOC105371045A0A1W2PR82 267 aa18.32■□□□□ 0.52
CLCC1-201ENST00000302500 RAPGEF3O95398 923 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms