RNA–Protein interactions for RNA: ENST00000301659.8

GSDMA-201, Transcript of gasdermin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GSDMA, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMA-201ENST00000301659 CHMP7Q8WUX9 453 aaPredicted RBP22.01■■□□□ 1.11
GSDMA-201ENST00000301659 FBLN2P98095 1184 aa21.99■■□□□ 1.11
GSDMA-201ENST00000301659 GRIN2AQ12879 1464 aa21.99■■□□□ 1.11
GSDMA-201ENST00000301659 RANGAP1P46060 587 aaPredicted RBP21.97■■□□□ 1.11
GSDMA-201ENST00000301659 CLIP1P30622 1438 aa21.93■■□□□ 1.1
GSDMA-201ENST00000301659 CTTNBP2Q8WZ74 1663 aa21.93■■□□□ 1.1
GSDMA-201ENST00000301659 CHD1O14646 1710 aa21.85■■□□□ 1.09
GSDMA-201ENST00000301659 CEP170Q5SW79 1584 aa21.85■■□□□ 1.09
GSDMA-201ENST00000301659 ZEB1P37275 1124 aaPredicted RBP21.85■■□□□ 1.09
GSDMA-201ENST00000301659 NUP160Q12769 1436 aa21.85■■□□□ 1.09
GSDMA-201ENST00000301659 KIAA0586Q9BVV6 1533 aa21.83■■□□□ 1.09
GSDMA-201ENST00000301659 IQGAP2Q13576 1575 aa21.82■■□□□ 1.08
GSDMA-201ENST00000301659 ARHGAP35Q9NRY4 1499 aa21.8■■□□□ 1.08
GSDMA-201ENST00000301659 ARAP1Q96P48 1450 aa21.75■■□□□ 1.07
GSDMA-201ENST00000301659 EFCAB5A4FU69 1503 aa21.74■■□□□ 1.07
GSDMA-201ENST00000301659 P3H3Q8IVL6 736 aa21.72■■□□□ 1.07
GSDMA-201ENST00000301659 UGGT2Q9NYU1 1516 aa21.71■■□□□ 1.07
GSDMA-201ENST00000301659 SAMD9Q5K651 1589 aa21.7■■□□□ 1.06
GSDMA-201ENST00000301659 VPS8Q8N3P4 1428 aa21.69■■□□□ 1.06
GSDMA-201ENST00000301659 JPH4Q96JJ6 628 aa21.68■■□□□ 1.06
GSDMA-201ENST00000301659 FHOD3Q2V2M9 1422 aa21.68■■□□□ 1.06
GSDMA-201ENST00000301659 DISP1Q96F81 1524 aa21.63■■□□□ 1.05
GSDMA-201ENST00000301659 CLASP1Q7Z460 1538 aa21.61■■□□□ 1.05
GSDMA-201ENST00000301659 KIAA0556O60303 1618 aa21.6■■□□□ 1.05
GSDMA-201ENST00000301659 OSCARQ8IYS5 282 aa21.58■■□□□ 1.05
GSDMA-201ENST00000301659 CARMIL2Q6F5E8 1435 aa21.57■■□□□ 1.04
GSDMA-201ENST00000301659 SHROOM2Q13796 1616 aa21.56■■□□□ 1.04
GSDMA-201ENST00000301659 FMN1Q68DA7 1419 aa21.56■■□□□ 1.04
GSDMA-201ENST00000301659 PRG4Q92954 1404 aaPredicted RBP21.56■■□□□ 1.04
GSDMA-201ENST00000301659 TTBK1Q5TCY1 1321 aaPredicted RBP21.5■■□□□ 1.03
GSDMA-201ENST00000301659 PCF11O94913 1555 aaKnown RBP21.49■■□□□ 1.03
GSDMA-201ENST00000301659 CASKIN1Q8WXD9 1431 aa21.47■■□□□ 1.03
GSDMA-201ENST00000301659 APLP2Q06481 763 aa21.47■■□□□ 1.03
GSDMA-201ENST00000301659 ATP1B4Q9UN42 357 aaPredicted RBP21.46■■□□□ 1.03
GSDMA-201ENST00000301659 FYCO1Q9BQS8 1478 aa21.45■■□□□ 1.03
GSDMA-201ENST00000301659 ERCC6L2Q5T890 1561 aa21.45■■□□□ 1.03
GSDMA-201ENST00000301659 PTPRGP23470 1445 aa21.4■■□□□ 1.02
GSDMA-201ENST00000301659 PLB1Q6P1J6 1458 aa21.37■■□□□ 1.01
GSDMA-201ENST00000301659 HECW1Q76N89 1606 aa21.35■■□□□ 1.01
GSDMA-201ENST00000301659 RAPGEF6Q8TEU7 1601 aa21.35■■□□□ 1.01
GSDMA-201ENST00000301659 MAP3K1Q13233 1512 aa21.34■■□□□ 1.01
GSDMA-201ENST00000301659 TIAM1Q13009 1591 aa21.34■■□□□ 1.01
GSDMA-201ENST00000301659 KANK4Q5T7N3 995 aaPredicted RBP21.33■■□□□ 1.01
GSDMA-201ENST00000301659 LRRIQ1Q96JM4 1722 aa21.31■■□□□ 1
GSDMA-201ENST00000301659 NUP153P49790 1475 aaKnown RBP21.31■■□□□ 1
GSDMA-201ENST00000301659 ABCA8O94911 1581 aa21.31■■□□□ 1
GSDMA-201ENST00000301659 CFAP43Q8NDM7 1665 aa21.3■■□□□ 1
GSDMA-201ENST00000301659 ARID3CA6NKF2 412 aa21.3■■□□□ 1
GSDMA-201ENST00000301659 EPRSP07814 1512 aaKnown RBP21.29■■□□□ 1
GSDMA-201ENST00000301659 CCDC18Q5T9S5 1454 aa21.29■■□□□ 1
GSDMA-201ENST00000301659 UACAQ9BZF9 1416 aa21.26■□□□□ 0.99
GSDMA-201ENST00000301659 LRRC9Q6ZRR7 1453 aa21.26■□□□□ 0.99
GSDMA-201ENST00000301659 CDK13Q14004 1512 aaKnown RBP21.26■□□□□ 0.99
GSDMA-201ENST00000301659 ARHGEF11O15085 1522 aa21.21■□□□□ 0.99
GSDMA-201ENST00000301659 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.2■□□□□ 0.98
GSDMA-201ENST00000301659 HNRNPUL2Q1KMD3 747 aaKnown RBP21.2■□□□□ 0.98
GSDMA-201ENST00000301659 MTUS2Q5JR59 1369 aa21.2■□□□□ 0.98
GSDMA-201ENST00000301659 ABCC2Q92887 1545 aa21.19■□□□□ 0.98
GSDMA-201ENST00000301659 ATP10BO94823 1461 aa21.18■□□□□ 0.98
GSDMA-201ENST00000301659 CCER1Q8TC90 406 aaPredicted RBP21.17■□□□□ 0.98
GSDMA-201ENST00000301659 MAGI3Q5TCQ9 1506 aa21.17■□□□□ 0.98
GSDMA-201ENST00000301659 UHRF1BP1LA0JNW5 1464 aa21.16■□□□□ 0.98
GSDMA-201ENST00000301659 CDK11AQ9UQ88 783 aaPredicted RBP21.14■□□□□ 0.98
GSDMA-201ENST00000301659 EHBP1L1Q8N3D4 1523 aa21.14■□□□□ 0.97
GSDMA-201ENST00000301659 RIMBP3CA6NJZ7 1639 aa21.12■□□□□ 0.97
GSDMA-201ENST00000301659 RIMBP3BA6NNM3 1639 aa21.12■□□□□ 0.97
GSDMA-201ENST00000301659 RIMBP3Q9UFD9 1639 aa21.12■□□□□ 0.97
GSDMA-201ENST00000301659 ADCY10Q96PN6 1610 aa21.1■□□□□ 0.97
GSDMA-201ENST00000301659 KDM5BQ9UGL1 1544 aa21.08■□□□□ 0.97
GSDMA-201ENST00000301659 PLEKHD1A6NEE1 506 aa21.07■□□□□ 0.96
GSDMA-201ENST00000301659 TROQ12816 1431 aaPredicted RBP21.07■□□□□ 0.96
GSDMA-201ENST00000301659 PHLDB1Q86UU1 1377 aa21.06■□□□□ 0.96
GSDMA-201ENST00000301659 SUPT6HQ7KZ85 1726 aaKnown RBP21.06■□□□□ 0.96
GSDMA-201ENST00000301659 NCOA2Q15596 1464 aa21.05■□□□□ 0.96
GSDMA-201ENST00000301659 CYB5RLQ6IPT4 315 aa21.04■□□□□ 0.96
GSDMA-201ENST00000301659 ZCCHC11Q5TAX3 1644 aaKnown RBP21.04■□□□□ 0.96
GSDMA-201ENST00000301659 RRBP1Q9P2E9 1410 aaKnown RBP20.99■□□□□ 0.95
GSDMA-201ENST00000301659 KIF14Q15058 1648 aa20.97■□□□□ 0.95
GSDMA-201ENST00000301659 NPM1P06748 294 aaKnown RBP eCLIP20.97■□□□□ 0.95
GSDMA-201ENST00000301659 CCNB3Q8WWL7 1395 aa20.95■□□□□ 0.94
GSDMA-201ENST00000301659 MYOM3Q5VTT5 1437 aa20.95■□□□□ 0.94
GSDMA-201ENST00000301659 FGD6Q6ZV73 1430 aa20.92■□□□□ 0.94
GSDMA-201ENST00000301659 KCNH8Q96L42 1107 aa20.91■□□□□ 0.94
GSDMA-201ENST00000301659 ABCC10Q5T3U5 1492 aa20.9■□□□□ 0.94
GSDMA-201ENST00000301659 WDR7Q9Y4E6 1490 aa20.9■□□□□ 0.94
GSDMA-201ENST00000301659 ASXL2Q76L83 1435 aa20.9■□□□□ 0.94
GSDMA-201ENST00000301659 FAM50AQ14320 339 aaKnown RBP20.87■□□□□ 0.93
GSDMA-201ENST00000301659 GPATCH8Q9UKJ3 1502 aaKnown RBP20.86■□□□□ 0.93
GSDMA-201ENST00000301659 MIA2Q96PC5 1412 aa20.85■□□□□ 0.93
GSDMA-201ENST00000301659 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.84■□□□□ 0.93
GSDMA-201ENST00000301659 SCAF1Q9H7N4 1312 aaKnown RBP20.84■□□□□ 0.93
GSDMA-201ENST00000301659 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.82■□□□□ 0.92
GSDMA-201ENST00000301659 TTC37Q6PGP7 1564 aa20.82■□□□□ 0.92
GSDMA-201ENST00000301659 CFDP1Q9UEE9 299 aaPredicted RBP20.82■□□□□ 0.92
GSDMA-201ENST00000301659 PTPN23Q9H3S7 1636 aa20.82■□□□□ 0.92
GSDMA-201ENST00000301659 ITSN2Q9NZM3 1697 aa20.82■□□□□ 0.92
GSDMA-201ENST00000301659 DIEXFQ68CQ4 756 aaKnown RBP20.82■□□□□ 0.92
GSDMA-201ENST00000301659 CDC42BPAQ5VT25 1732 aa20.81■□□□□ 0.92
GSDMA-201ENST00000301659 TCOF1Q13428 1488 aaKnown RBP20.8■□□□□ 0.92
GSDMA-201ENST00000301659 ITGAEP38570 1179 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms