RNA–Protein interactions for RNA: ENST00000299572.9

CENPN-201, Transcript of centromere protein N, humanhuman

TSL 1 (best) BASIC

Gene CENPN, Length 1,398 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPN-201ENST00000299572 IGF1RP08069 1367 aa35.45■■■■□ 3.27
CENPN-201ENST00000299572 JPH4Q96JJ6 628 aa35.44■■■■□ 3.26
CENPN-201ENST00000299572 KIAA0586Q9BVV6 1533 aa35.32■■■■□ 3.24
CENPN-201ENST00000299572 CARMIL1Q5VZK9 1371 aa35.24■■■■□ 3.23
CENPN-201ENST00000299572 KIF13AQ9H1H9 1805 aa35.1■■■■□ 3.21
CENPN-201ENST00000299572 ADCY10Q96PN6 1610 aa35.08■■■■□ 3.21
CENPN-201ENST00000299572 IQGAP2Q13576 1575 aa35.03■■■■□ 3.2
CENPN-201ENST00000299572 NPM1P06748 294 aaKnown RBP eCLIP35.03■■■■□ 3.2
CENPN-201ENST00000299572 MAPKBP1O60336 1514 aa35.02■■■■□ 3.2
CENPN-201ENST00000299572 CARMIL2Q6F5E8 1435 aa34.97■■■■□ 3.19
CENPN-201ENST00000299572 RAPGEF2Q9Y4G8 1499 aa34.96■■■■□ 3.19
CENPN-201ENST00000299572 PTPRGP23470 1445 aa34.95■■■■□ 3.18
CENPN-201ENST00000299572 ABCC10Q5T3U5 1492 aa34.94■■■■□ 3.18
CENPN-201ENST00000299572 TNIKQ9UKE5 1360 aa34.9■■■■□ 3.18
CENPN-201ENST00000299572 DIP2BQ9P265 1576 aa34.89■■■■□ 3.18
CENPN-201ENST00000299572 FAM69CQ0P6D2 419 aa34.87■■■■□ 3.17
CENPN-201ENST00000299572 TTBK1Q5TCY1 1321 aaPredicted RBP34.84■■■■□ 3.17
CENPN-201ENST00000299572 DISP1Q96F81 1524 aa34.82■■■■□ 3.17
CENPN-201ENST00000299572 UGGT2Q9NYU1 1516 aa34.8■■■■□ 3.16
CENPN-201ENST00000299572 ABCC2Q92887 1545 aa34.76■■■■□ 3.16
CENPN-201ENST00000299572 CTTNBP2Q8WZ74 1663 aa34.73■■■■□ 3.15
CENPN-201ENST00000299572 UHRF1BP1LA0JNW5 1464 aa34.72■■■■□ 3.15
CENPN-201ENST00000299572 KIAA0556O60303 1618 aa34.72■■■■□ 3.15
CENPN-201ENST00000299572 UACAQ9BZF9 1416 aa34.7■■■■□ 3.14
CENPN-201ENST00000299572 PRXQ9BXM0 1461 aa34.63■■■■□ 3.13
CENPN-201ENST00000299572 AEBP2Q6ZN18 517 aaPredicted RBP34.63■■■■□ 3.13
CENPN-201ENST00000299572 TSPOAP1O95153 1857 aa34.63■■■■□ 3.13
CENPN-201ENST00000299572 ASXL2Q76L83 1435 aa34.62■■■■□ 3.13
CENPN-201ENST00000299572 PLB1Q6P1J6 1458 aa34.6■■■■□ 3.13
CENPN-201ENST00000299572 KDM5BQ9UGL1 1544 aa34.56■■■■□ 3.12
CENPN-201ENST00000299572 KDM6BO15054 1643 aa34.55■■■■□ 3.12
CENPN-201ENST00000299572 GOLGA3Q08378 1498 aa34.54■■■■□ 3.12
CENPN-201ENST00000299572 GLI2P10070 1586 aa34.52■■■■□ 3.12
CENPN-201ENST00000299572 ZCCHC11Q5TAX3 1644 aaKnown RBP34.52■■■■□ 3.12
CENPN-201ENST00000299572 PPRC1Q5VV67 1664 aaKnown RBP34.42■■■■□ 3.1
CENPN-201ENST00000299572 EPRSP07814 1512 aaKnown RBP34.41■■■■□ 3.1
CENPN-201ENST00000299572 ABCA8O94911 1581 aa34.37■■■■□ 3.09
CENPN-201ENST00000299572 CSRNP3Q8WYN3 585 aa34.36■■■■□ 3.09
CENPN-201ENST00000299572 MAP3K4Q9Y6R4 1608 aa34.36■■■■□ 3.09
CENPN-201ENST00000299572 WDR7Q9Y4E6 1490 aa34.32■■■■□ 3.08
CENPN-201ENST00000299572 EEA1Q15075 1411 aa34.31■■■■□ 3.08
CENPN-201ENST00000299572 TEX14Q8IWB6 1497 aa34.24■■■■□ 3.07
CENPN-201ENST00000299572 SAMD9Q5K651 1589 aa34.21■■■■□ 3.07
CENPN-201ENST00000299572 FAM9AQ8IZU1 332 aaPredicted RBP34.19■■■■□ 3.06
CENPN-201ENST00000299572 P3H3Q8IVL6 736 aa34.18■■■■□ 3.06
CENPN-201ENST00000299572 CFAP43Q8NDM7 1665 aa34.14■■■■□ 3.06
CENPN-201ENST00000299572 COL17A1Q9UMD9 1497 aaPredicted RBP34.12■■■■□ 3.05
CENPN-201ENST00000299572 KCNH8Q96L42 1107 aa34.09■■■■□ 3.05
CENPN-201ENST00000299572 CD109Q6YHK3 1445 aa34.07■■■■□ 3.05
CENPN-201ENST00000299572 MAGI3Q5TCQ9 1506 aa34.06■■■■□ 3.04
CENPN-201ENST00000299572 KDM4FA0A1W2PPD8 638 aa34.05■■■■□ 3.04
CENPN-201ENST00000299572 KIF21BO75037 1637 aa34.05■■■■□ 3.04
CENPN-201ENST00000299572 ATP10BO94823 1461 aa34.05■■■■□ 3.04
CENPN-201ENST00000299572 RAPGEF6Q8TEU7 1601 aa34.05■■■■□ 3.04
CENPN-201ENST00000299572 ARID3CA6NKF2 412 aa34.04■■■■□ 3.04
CENPN-201ENST00000299572 RANGAP1P46060 587 aaPredicted RBP33.98■■■■□ 3.03
CENPN-201ENST00000299572 FHOD3Q2V2M9 1422 aa33.95■■■■□ 3.03
CENPN-201ENST00000299572 EFCAB5A4FU69 1503 aa33.91■■■■□ 3.02
CENPN-201ENST00000299572 NUP153P49790 1475 aaKnown RBP33.91■■■■□ 3.02
CENPN-201ENST00000299572 ABCA9Q8IUA7 1624 aa33.9■■■■□ 3.02
CENPN-201ENST00000299572 ADGRL1O94910 1474 aa33.89■■■■□ 3.02
CENPN-201ENST00000299572 CHIC1Q5VXU3 224 aa33.85■■■■□ 3.01
CENPN-201ENST00000299572 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.85■■■■□ 3.01
CENPN-201ENST00000299572 HNRNPUL2Q1KMD3 747 aaKnown RBP33.85■■■■□ 3.01
CENPN-201ENST00000299572 ARAP3Q8WWN8 1544 aa33.79■■■■□ 3
CENPN-201ENST00000299572 PHLDB1Q86UU1 1377 aa33.73■■■□□ 2.99
CENPN-201ENST00000299572 UBTFP17480 764 aaKnown RBP33.72■■■□□ 2.99
CENPN-201ENST00000299572 EHMT2Q96KQ7 1210 aa33.72■■■□□ 2.99
CENPN-201ENST00000299572 NEO1Q92859 1461 aa33.69■■■□□ 2.98
CENPN-201ENST00000299572 PLEKHD1A6NEE1 506 aa33.67■■■□□ 2.98
CENPN-201ENST00000299572 ARHGAP35Q9NRY4 1499 aa33.59■■■□□ 2.97
CENPN-201ENST00000299572 CDK13Q14004 1512 aaKnown RBP33.59■■■□□ 2.97
CENPN-201ENST00000299572 FMN1Q68DA7 1419 aa33.58■■■□□ 2.97
CENPN-201ENST00000299572 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.57■■■□□ 2.96
CENPN-201ENST00000299572 HECW1Q76N89 1606 aa33.55■■■□□ 2.96
CENPN-201ENST00000299572 RAPGEF3O95398 923 aa33.54■■■□□ 2.96
CENPN-201ENST00000299572 FRMPD1Q5SYB0 1578 aa33.54■■■□□ 2.96
CENPN-201ENST00000299572 TTC37Q6PGP7 1564 aa33.54■■■□□ 2.96
CENPN-201ENST00000299572 CFAP74Q9C0B2 1584 aa33.52■■■□□ 2.96
CENPN-201ENST00000299572 FANCAO15360 1455 aa33.49■■■□□ 2.95
CENPN-201ENST00000299572 ATP1B4Q9UN42 357 aaPredicted RBP33.46■■■□□ 2.95
CENPN-201ENST00000299572 AKNAQ7Z591 1439 aa33.45■■■□□ 2.95
CENPN-201ENST00000299572 DENND4BO75064 1496 aaPredicted RBP33.44■■■□□ 2.94
CENPN-201ENST00000299572 RICTORQ6R327 1708 aa33.43■■■□□ 2.94
CENPN-201ENST00000299572 HECW2Q9P2P5 1572 aa33.38■■■□□ 2.93
CENPN-201ENST00000299572 ARHGEF40Q8TER5 1519 aa33.38■■■□□ 2.93
CENPN-201ENST00000299572 CDK11AQ9UQ88 783 aaPredicted RBP33.36■■■□□ 2.93
CENPN-201ENST00000299572 ADAMTSL3P82987 1691 aa33.35■■■□□ 2.93
CENPN-201ENST00000299572 PLCH2O75038 1416 aa33.34■■■□□ 2.93
CENPN-201ENST00000299572 LRRIQ1Q96JM4 1722 aa33.33■■■□□ 2.93
CENPN-201ENST00000299572 MYO5CQ9NQX4 1742 aa33.32■■■□□ 2.93
CENPN-201ENST00000299572 ZMYM4Q5VZL5 1548 aa33.32■■■□□ 2.92
CENPN-201ENST00000299572 KIF14Q15058 1648 aa33.31■■■□□ 2.92
CENPN-201ENST00000299572 BCORL1Q5H9F3 1711 aa33.31■■■□□ 2.92
CENPN-201ENST00000299572 TROQ12816 1431 aaPredicted RBP33.29■■■□□ 2.92
CENPN-201ENST00000299572 ARID4BQ4LE39 1312 aaPredicted RBP33.27■■■□□ 2.92
CENPN-201ENST00000299572 PCF11O94913 1555 aaKnown RBP33.26■■■□□ 2.92
CENPN-201ENST00000299572 CLIP1P30622 1438 aa33.26■■■□□ 2.92
CENPN-201ENST00000299572 ZFYVE16Q7Z3T8 1539 aa33.24■■■□□ 2.91
CENPN-201ENST00000299572 PTPRMP28827 1452 aa33.24■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms