RNA–Protein interactions for RNA: ENST00000299300.10

CCT2-201, Transcript of chaperonin containing TCP1 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT2, Length 2,041 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT2-201ENST00000299300 POLA1P09884 1462 aaPredicted RBP20.57■□□□□ 0.88
CCT2-201ENST00000299300 MIER1Q8N108 512 aa20.56■□□□□ 0.88
CCT2-201ENST00000299300 EFCAB5A4FU69 1503 aa20.55■□□□□ 0.88
CCT2-201ENST00000299300 WDR97A6NE52 1622 aa20.55■□□□□ 0.88
CCT2-201ENST00000299300 PCF11O94913 1555 aaKnown RBP20.54■□□□□ 0.88
CCT2-201ENST00000299300 RAD54L2Q9Y4B4 1467 aa20.53■□□□□ 0.88
CCT2-201ENST00000299300 GTF3C3Q9Y5Q9 886 aa20.53■□□□□ 0.88
CCT2-201ENST00000299300 CTTNBP2Q8WZ74 1663 aa20.52■□□□□ 0.88
CCT2-201ENST00000299300 AQRO60306 1485 aaKnown RBP eCLIP20.51■□□□□ 0.876e-7■■■■□ 24.4
CCT2-201ENST00000299300 LAMC3Q9Y6N6 1575 aa20.5■□□□□ 0.87
CCT2-201ENST00000299300 NESP48681 1621 aa20.49■□□□□ 0.87
CCT2-201ENST00000299300 FYCO1Q9BQS8 1478 aa20.48■□□□□ 0.87
CCT2-201ENST00000299300 PHLDB1Q86UU1 1377 aa20.47■□□□□ 0.87
CCT2-201ENST00000299300 MAPKBP1O60336 1514 aa20.46■□□□□ 0.87
CCT2-201ENST00000299300 RAB3GAP2Q9H2M9 1393 aa20.46■□□□□ 0.87
CCT2-201ENST00000299300 CASKIN1Q8WXD9 1431 aa20.46■□□□□ 0.87
CCT2-201ENST00000299300 URB2Q14146 1524 aaKnown RBP20.44■□□□□ 0.86
CCT2-201ENST00000299300 ABCA5Q8WWZ7 1642 aa20.43■□□□□ 0.86
CCT2-201ENST00000299300 SETD5Q9C0A6 1442 aa20.43■□□□□ 0.86
CCT2-201ENST00000299300 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.42■□□□□ 0.864e-6■■■■■ 30.2
CCT2-201ENST00000299300 FHOD3Q2V2M9 1422 aa20.4■□□□□ 0.86
CCT2-201ENST00000299300 SAMD9Q5K651 1589 aa20.37■□□□□ 0.85
CCT2-201ENST00000299300 SNAPC4Q5SXM2 1469 aa20.36■□□□□ 0.85
CCT2-201ENST00000299300 FMN1Q68DA7 1419 aa20.34■□□□□ 0.85
CCT2-201ENST00000299300 ITGAEP38570 1179 aa20.33■□□□□ 0.85
CCT2-201ENST00000299300 YTHDC1Q96MU7 727 aaKnown RBP20.32■□□□□ 0.84
CCT2-201ENST00000299300 P3H3Q8IVL6 736 aa20.31■□□□□ 0.84
CCT2-201ENST00000299300 GAPVD1Q14C86 1478 aa20.28■□□□□ 0.84
CCT2-201ENST00000299300 LRRIQ1Q96JM4 1722 aa20.28■□□□□ 0.84
CCT2-201ENST00000299300 THOC2Q8NI27 1593 aaKnown RBP20.28■□□□□ 0.84
CCT2-201ENST00000299300 PDS5BQ9NTI5 1447 aa20.28■□□□□ 0.84
CCT2-201ENST00000299300 KIF21AQ7Z4S6 1674 aa20.25■□□□□ 0.83
CCT2-201ENST00000299300 TARBP1Q13395 1621 aaKnown RBP20.25■□□□□ 0.83
CCT2-201ENST00000299300 GRIN2BQ13224 1484 aa20.25■□□□□ 0.83
CCT2-201ENST00000299300 FGD6Q6ZV73 1430 aa20.24■□□□□ 0.83
CCT2-201ENST00000299300 FAM50AQ14320 339 aaKnown RBP20.24■□□□□ 0.83
CCT2-201ENST00000299300 TIMELESSQ9UNS1 1208 aa20.23■□□□□ 0.83
CCT2-201ENST00000299300 TDRD9Q8NDG6 1382 aaKnown RBP20.22■□□□□ 0.83
CCT2-201ENST00000299300 ATP1B4Q9UN42 357 aaPredicted RBP20.16■□□□□ 0.82
CCT2-201ENST00000299300 ARHGEF11O15085 1522 aa20.16■□□□□ 0.82
CCT2-201ENST00000299300 EHBP1L1Q8N3D4 1523 aa20.15■□□□□ 0.82
CCT2-201ENST00000299300 SUPT6HQ7KZ85 1726 aaKnown RBP20.15■□□□□ 0.82
CCT2-201ENST00000299300 PBRM1Q86U86 1689 aa20.14■□□□□ 0.82
CCT2-201ENST00000299300 HFM1A2PYH4 1435 aa20.13■□□□□ 0.81
CCT2-201ENST00000299300 NCOA2Q15596 1464 aa20.13■□□□□ 0.81
CCT2-201ENST00000299300 MTUS2Q5JR59 1369 aa20.13■□□□□ 0.81
CCT2-201ENST00000299300 MYOM3Q5VTT5 1437 aa20.12■□□□□ 0.81
CCT2-201ENST00000299300 PTPN23Q9H3S7 1636 aa20.12■□□□□ 0.81
CCT2-201ENST00000299300 PTPRKQ15262 1439 aa20.12■□□□□ 0.81
CCT2-201ENST00000299300 SIN3AQ96ST3 1273 aa20.12■□□□□ 0.81
CCT2-201ENST00000299300 UGGT2Q9NYU1 1516 aa20.11■□□□□ 0.81
CCT2-201ENST00000299300 CCDC18Q5T9S5 1454 aa20.09■□□□□ 0.81
CCT2-201ENST00000299300 UACAQ9BZF9 1416 aa20.08■□□□□ 0.8
CCT2-201ENST00000299300 ADAMTS12P58397 1594 aa20.08■□□□□ 0.8
CCT2-201ENST00000299300 MAGI3Q5TCQ9 1506 aa20.07■□□□□ 0.8
CCT2-201ENST00000299300 DNAJC5BQ9UF47 199 aa20.07■□□□□ 0.8
CCT2-201ENST00000299300 PPP1R15AO75807 674 aaPredicted RBP20.06■□□□□ 0.8
CCT2-201ENST00000299300 TCOF1Q13428 1488 aaKnown RBP20.06■□□□□ 0.8
CCT2-201ENST00000299300 NAIPQ13075 1403 aa20.05■□□□□ 0.8
CCT2-201ENST00000299300 HECW1Q76N89 1606 aa20.05■□□□□ 0.8
CCT2-201ENST00000299300 IQGAP2Q13576 1575 aa20.04■□□□□ 0.8
CCT2-201ENST00000299300 MRC2Q9UBG0 1479 aa20.01■□□□□ 0.79
CCT2-201ENST00000299300 GCC2Q8IWJ2 1684 aa20■□□□□ 0.79
CCT2-201ENST00000299300 AKNAQ7Z591 1439 aa19.98■□□□□ 0.79
CCT2-201ENST00000299300 WDR62O43379 1518 aa19.97■□□□□ 0.79
CCT2-201ENST00000299300 EPRSP07814 1512 aaKnown RBP19.97■□□□□ 0.79
CCT2-201ENST00000299300 KDM5BQ9UGL1 1544 aa19.96■□□□□ 0.79
CCT2-201ENST00000299300 MIA2Q96PC5 1412 aa19.93■□□□□ 0.78
CCT2-201ENST00000299300 TONSLQ96HA7 1378 aa19.91■□□□□ 0.78
CCT2-201ENST00000299300 IFT140Q96RY7 1462 aa19.9■□□□□ 0.78
CCT2-201ENST00000299300 DDX10Q13206 875 aaKnown RBP19.9■□□□□ 0.78
CCT2-201ENST00000299300 SUPT16HQ9Y5B9 1047 aaKnown RBP19.88■□□□□ 0.77
CCT2-201ENST00000299300 KCNH8Q96L42 1107 aa19.88■□□□□ 0.77
CCT2-201ENST00000299300 DENND4BO75064 1496 aaPredicted RBP19.88■□□□□ 0.77
CCT2-201ENST00000299300 CDK13Q14004 1512 aaKnown RBP19.87■□□□□ 0.77
CCT2-201ENST00000299300 CCER2I3L3R5 266 aa19.85■□□□□ 0.77
CCT2-201ENST00000299300 KIAA0586Q9BVV6 1533 aa19.85■□□□□ 0.77
CCT2-201ENST00000299300 KIAA0556O60303 1618 aa19.84■□□□□ 0.77
CCT2-201ENST00000299300 KDM6BO15054 1643 aa19.83■□□□□ 0.77
CCT2-201ENST00000299300 DISP1Q96F81 1524 aa19.83■□□□□ 0.76
CCT2-201ENST00000299300 ZNF608Q9ULD9 1512 aaPredicted RBP19.82■□□□□ 0.76
CCT2-201ENST00000299300 DNMT1P26358 1616 aaKnown RBP19.78■□□□□ 0.76
CCT2-201ENST00000299300 ROCK1Q13464 1354 aa19.77■□□□□ 0.76
CCT2-201ENST00000299300 RAPGEF6Q8TEU7 1601 aa19.77■□□□□ 0.76
CCT2-201ENST00000299300 NUP153P49790 1475 aaKnown RBP19.76■□□□□ 0.75
CCT2-201ENST00000299300 RRP7BPQ9NSQ0 103 aa19.76■□□□□ 0.75
CCT2-201ENST00000299300 GRIN2AQ12879 1464 aa19.76■□□□□ 0.75
CCT2-201ENST00000299300 EIF4G3O43432 1585 aaKnown RBP19.76■□□□□ 0.75
CCT2-201ENST00000299300 HIRIP3Q9BW71 556 aaPredicted RBP19.75■□□□□ 0.75
CCT2-201ENST00000299300 DAPK1P53355 1430 aa19.73■□□□□ 0.75
CCT2-201ENST00000299300 ANP32CO43423 234 aa19.73■□□□□ 0.75
CCT2-201ENST00000299300 CHIC2Q9UKJ5 165 aa19.71■□□□□ 0.75
CCT2-201ENST00000299300 ABCC5O15440 1437 aa19.71■□□□□ 0.75
CCT2-201ENST00000299300 MPHOSPH9Q99550 1183 aa19.69■□□□□ 0.74
CCT2-201ENST00000299300 MAGI1Q96QZ7 1491 aaPredicted RBP19.69■□□□□ 0.74
CCT2-201ENST00000299300 ADCY10Q96PN6 1610 aa19.67■□□□□ 0.74
CCT2-201ENST00000299300 ANKRD30BQ9BXX2 1392 aa19.65■□□□□ 0.74
CCT2-201ENST00000299300 CEP170Q5SW79 1584 aa19.64■□□□□ 0.74
CCT2-201ENST00000299300 ITSN2Q9NZM3 1697 aa19.64■□□□□ 0.73
CCT2-201ENST00000299300 TROQ12816 1431 aaPredicted RBP19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms