RNA–Protein interactions for RNA: ENST00000298876.8

SMCO2-201, Transcript of single-pass membrane protein with coiled-coil domains 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMCO2, Length 1,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO2-201ENST00000298876 RIMBP3Q9UFD9 1639 aa13.93□□□□□ -0.18
SMCO2-201ENST00000298876 CLASP1Q7Z460 1538 aa13.92□□□□□ -0.18
SMCO2-201ENST00000298876 POTEDQ86YR6 584 aa13.92□□□□□ -0.18
SMCO2-201ENST00000298876 CUL7Q14999 1698 aa13.91□□□□□ -0.18
SMCO2-201ENST00000298876 CARMIL1Q5VZK9 1371 aa13.9□□□□□ -0.18
SMCO2-201ENST00000298876 NUP160Q12769 1436 aa13.9□□□□□ -0.19
SMCO2-201ENST00000298876 CEP170Q5SW79 1584 aa13.86□□□□□ -0.19
SMCO2-201ENST00000298876 JPH4Q96JJ6 628 aa13.85□□□□□ -0.19
SMCO2-201ENST00000298876 ARAP1Q96P48 1450 aa13.81□□□□□ -0.2
SMCO2-201ENST00000298876 PRG4Q92954 1404 aaPredicted RBP13.81□□□□□ -0.2
SMCO2-201ENST00000298876 RAPGEF2Q9Y4G8 1499 aa13.8□□□□□ -0.2
SMCO2-201ENST00000298876 KIAA0586Q9BVV6 1533 aa13.8□□□□□ -0.2
SMCO2-201ENST00000298876 EEA1Q15075 1411 aa13.78□□□□□ -0.2
SMCO2-201ENST00000298876 RUSC2Q8N2Y8 1516 aa13.78□□□□□ -0.2
SMCO2-201ENST00000298876 CSRNP3Q8WYN3 585 aa13.77□□□□□ -0.21
SMCO2-201ENST00000298876 TRHP20396 242 aaPredicted RBP13.76□□□□□ -0.21
SMCO2-201ENST00000298876 FAM9AQ8IZU1 332 aaPredicted RBP13.76□□□□□ -0.21
SMCO2-201ENST00000298876 CARMIL2Q6F5E8 1435 aa13.75□□□□□ -0.21
SMCO2-201ENST00000298876 SHROOM2Q13796 1616 aa13.75□□□□□ -0.21
SMCO2-201ENST00000298876 NPM1P06748 294 aaKnown RBP eCLIP13.74□□□□□ -0.21
SMCO2-201ENST00000298876 IQGAP2Q13576 1575 aa13.71□□□□□ -0.22
SMCO2-201ENST00000298876 TTBK1Q5TCY1 1321 aaPredicted RBP13.69□□□□□ -0.22
SMCO2-201ENST00000298876 ERCC6L2Q5T890 1561 aa13.69□□□□□ -0.22
SMCO2-201ENST00000298876 PRXQ9BXM0 1461 aa13.68□□□□□ -0.22
SMCO2-201ENST00000298876 PTPRGP23470 1445 aa13.66□□□□□ -0.22
SMCO2-201ENST00000298876 TNIKQ9UKE5 1360 aa13.66□□□□□ -0.22
SMCO2-201ENST00000298876 GOLGA3Q08378 1498 aa13.64□□□□□ -0.23
SMCO2-201ENST00000298876 UGGT2Q9NYU1 1516 aa13.6□□□□□ -0.23
SMCO2-201ENST00000298876 CTTNBP2Q8WZ74 1663 aa13.59□□□□□ -0.23
SMCO2-201ENST00000298876 UBTFP17480 764 aaKnown RBP13.59□□□□□ -0.23
SMCO2-201ENST00000298876 DISP1Q96F81 1524 aa13.56□□□□□ -0.24
SMCO2-201ENST00000298876 RANGAP1P46060 587 aaPredicted RBP13.56□□□□□ -0.24
SMCO2-201ENST00000298876 PPP4R3CPQ6ZMV5 832 aa13.55□□□□□ -0.24
SMCO2-201ENST00000298876 EHMT2Q96KQ7 1210 aa13.55□□□□□ -0.24
SMCO2-201ENST00000298876 UACAQ9BZF9 1416 aa13.55□□□□□ -0.24
SMCO2-201ENST00000298876 KIAA0556O60303 1618 aa13.54□□□□□ -0.24
SMCO2-201ENST00000298876 KIF21BO75037 1637 aa13.53□□□□□ -0.24
SMCO2-201ENST00000298876 P3H3Q8IVL6 736 aa13.53□□□□□ -0.24
SMCO2-201ENST00000298876 ADCY10Q96PN6 1610 aa13.5□□□□□ -0.25
SMCO2-201ENST00000298876 FAM69CQ0P6D2 419 aa13.5□□□□□ -0.25
SMCO2-201ENST00000298876 ABCC2Q92887 1545 aa13.49□□□□□ -0.25
SMCO2-201ENST00000298876 UHRF1BP1LA0JNW5 1464 aa13.49□□□□□ -0.25
SMCO2-201ENST00000298876 MAPKBP1O60336 1514 aa13.48□□□□□ -0.25
SMCO2-201ENST00000298876 PLB1Q6P1J6 1458 aa13.46□□□□□ -0.25
SMCO2-201ENST00000298876 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.45□□□□□ -0.26
SMCO2-201ENST00000298876 HNRNPUL2Q1KMD3 747 aaKnown RBP13.45□□□□□ -0.26
SMCO2-201ENST00000298876 ABCC10Q5T3U5 1492 aa13.44□□□□□ -0.26
SMCO2-201ENST00000298876 EFCAB5A4FU69 1503 aa13.43□□□□□ -0.26
SMCO2-201ENST00000298876 ASXL2Q76L83 1435 aa13.42□□□□□ -0.26
SMCO2-201ENST00000298876 KDM5BQ9UGL1 1544 aa13.42□□□□□ -0.26
SMCO2-201ENST00000298876 SCAF1Q9H7N4 1312 aaKnown RBP13.41□□□□□ -0.26
SMCO2-201ENST00000298876 SAMD9Q5K651 1589 aa13.41□□□□□ -0.26
SMCO2-201ENST00000298876 ATP1B4Q9UN42 357 aaPredicted RBP13.39□□□□□ -0.27
SMCO2-201ENST00000298876 FHOD3Q2V2M9 1422 aa13.39□□□□□ -0.27
SMCO2-201ENST00000298876 ARID3CA6NKF2 412 aa13.38□□□□□ -0.27
SMCO2-201ENST00000298876 ABCA8O94911 1581 aa13.37□□□□□ -0.27
SMCO2-201ENST00000298876 KCNH8Q96L42 1107 aa13.37□□□□□ -0.27
SMCO2-201ENST00000298876 DIP2BQ9P265 1576 aa13.37□□□□□ -0.27
SMCO2-201ENST00000298876 ZCCHC11Q5TAX3 1644 aaKnown RBP13.36□□□□□ -0.27
SMCO2-201ENST00000298876 FMN1Q68DA7 1419 aa13.36□□□□□ -0.27
SMCO2-201ENST00000298876 WDR7Q9Y4E6 1490 aa13.35□□□□□ -0.27
SMCO2-201ENST00000298876 PLEKHD1A6NEE1 506 aa13.34□□□□□ -0.27
SMCO2-201ENST00000298876 RAPGEF6Q8TEU7 1601 aa13.34□□□□□ -0.27
SMCO2-201ENST00000298876 CDK11AQ9UQ88 783 aaPredicted RBP13.33□□□□□ -0.28
SMCO2-201ENST00000298876 KIF13AQ9H1H9 1805 aa13.32□□□□□ -0.28
SMCO2-201ENST00000298876 EPRSP07814 1512 aaKnown RBP13.32□□□□□ -0.28
SMCO2-201ENST00000298876 GLI2P10070 1586 aa13.31□□□□□ -0.28
SMCO2-201ENST00000298876 ATP10BO94823 1461 aa13.3□□□□□ -0.28
SMCO2-201ENST00000298876 TEX14Q8IWB6 1497 aa13.29□□□□□ -0.28
SMCO2-201ENST00000298876 ARHGAP35Q9NRY4 1499 aa13.29□□□□□ -0.28
SMCO2-201ENST00000298876 CLIP1P30622 1438 aa13.29□□□□□ -0.28
SMCO2-201ENST00000298876 CD109Q6YHK3 1445 aa13.27□□□□□ -0.29
SMCO2-201ENST00000298876 NUP153P49790 1475 aaKnown RBP13.27□□□□□ -0.29
SMCO2-201ENST00000298876 KCNA4P22459 653 aa13.26□□□□□ -0.29
SMCO2-201ENST00000298876 TSPOAP1O95153 1857 aa13.25□□□□□ -0.29
SMCO2-201ENST00000298876 HECW1Q76N89 1606 aa13.24□□□□□ -0.29
SMCO2-201ENST00000298876 MAPK8IP2Q13387 824 aaPredicted RBP13.24□□□□□ -0.29
SMCO2-201ENST00000298876 KDM6BO15054 1643 aa13.23□□□□□ -0.29
SMCO2-201ENST00000298876 NCBP3Q53F19 620 aaKnown RBP13.22□□□□□ -0.29
SMCO2-201ENST00000298876 MAP3K4Q9Y6R4 1608 aa13.21□□□□□ -0.29
SMCO2-201ENST00000298876 CFAP43Q8NDM7 1665 aa13.21□□□□□ -0.3
SMCO2-201ENST00000298876 PHLDB1Q86UU1 1377 aa13.2□□□□□ -0.3
SMCO2-201ENST00000298876 MAGI3Q5TCQ9 1506 aa13.19□□□□□ -0.3
SMCO2-201ENST00000298876 LOC105371045A0A1W2PR82 267 aa13.19□□□□□ -0.3
SMCO2-201ENST00000298876 CASKIN1Q8WXD9 1431 aa13.19□□□□□ -0.3
SMCO2-201ENST00000298876 CCDC18Q5T9S5 1454 aa13.18□□□□□ -0.3
SMCO2-201ENST00000298876 CEP162Q5TB80 1403 aa13.18□□□□□ -0.3
SMCO2-201ENST00000298876 CNKSR2Q8WXI2 1034 aa13.17□□□□□ -0.3
SMCO2-201ENST00000298876 CDK13Q14004 1512 aaKnown RBP13.17□□□□□ -0.3
SMCO2-201ENST00000298876 FYCO1Q9BQS8 1478 aa13.16□□□□□ -0.3
SMCO2-201ENST00000298876 ABCA9Q8IUA7 1624 aa13.15□□□□□ -0.3
SMCO2-201ENST00000298876 TROQ12816 1431 aaPredicted RBP13.13□□□□□ -0.31
SMCO2-201ENST00000298876 PPRC1Q5VV67 1664 aaKnown RBP13.12□□□□□ -0.31
SMCO2-201ENST00000298876 PCF11O94913 1555 aaKnown RBP13.12□□□□□ -0.31
SMCO2-201ENST00000298876 NEO1Q92859 1461 aa13.12□□□□□ -0.31
SMCO2-201ENST00000298876 EFCAB2Q5VUJ9 269 aa13.11□□□□□ -0.31
SMCO2-201ENST00000298876 APLP2Q06481 763 aa13.1□□□□□ -0.31
SMCO2-201ENST00000298876 KIF14Q15058 1648 aa13.1□□□□□ -0.31
SMCO2-201ENST00000298876 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.09□□□□□ -0.31
SMCO2-201ENST00000298876 DMRT2Q9Y5R5 561 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms