RNA–Protein interactions for RNA: ENST00000298852.7

PSMC3-201, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PSMC3, Length 1,544 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-201ENST00000298852 CLASP1Q7Z460 1538 aa26.83■■□□□ 1.89
PSMC3-201ENST00000298852 IQGAP2Q13576 1575 aa26.77■■□□□ 1.88
PSMC3-201ENST00000298852 UBTFP17480 764 aaKnown RBP26.75■■□□□ 1.87
PSMC3-201ENST00000298852 TNIKQ9UKE5 1360 aa26.74■■□□□ 1.87
PSMC3-201ENST00000298852 SHROOM2Q13796 1616 aa26.71■■□□□ 1.87
PSMC3-201ENST00000298852 LOC105371045A0A1W2PR82 267 aa26.67■■□□□ 1.86
PSMC3-201ENST00000298852 UGGT2Q9NYU1 1516 aa26.67■■□□□ 1.86
PSMC3-201ENST00000298852 EHMT2Q96KQ7 1210 aa26.66■■□□□ 1.86
PSMC3-201ENST00000298852 JPH4Q96JJ6 628 aa26.62■■□□□ 1.85
PSMC3-201ENST00000298852 EFCAB5A4FU69 1503 aa26.56■■□□□ 1.84
PSMC3-201ENST00000298852 SAMD9Q5K651 1589 aa26.55■■□□□ 1.84
PSMC3-201ENST00000298852 CARMIL2Q6F5E8 1435 aa26.53■■□□□ 1.84
PSMC3-201ENST00000298852 PRG4Q92954 1404 aaPredicted RBP26.53■■□□□ 1.84
PSMC3-201ENST00000298852 DISP1Q96F81 1524 aa26.51■■□□□ 1.83
PSMC3-201ENST00000298852 KIAA0556O60303 1618 aa26.5■■□□□ 1.83
PSMC3-201ENST00000298852 CEP162Q5TB80 1403 aa26.5■■□□□ 1.83
PSMC3-201ENST00000298852 CLIP1P30622 1438 aa26.47■■□□□ 1.83
PSMC3-201ENST00000298852 ARHGAP35Q9NRY4 1499 aa26.45■■□□□ 1.82
PSMC3-201ENST00000298852 ARHGEF11O15085 1522 aa26.44■■□□□ 1.82
PSMC3-201ENST00000298852 ERCC6L2Q5T890 1561 aa26.42■■□□□ 1.82
PSMC3-201ENST00000298852 RIMBP3CA6NJZ7 1639 aa26.37■■□□□ 1.81
PSMC3-201ENST00000298852 RIMBP3BA6NNM3 1639 aa26.37■■□□□ 1.81
PSMC3-201ENST00000298852 RIMBP3Q9UFD9 1639 aa26.37■■□□□ 1.81
PSMC3-201ENST00000298852 RANGAP1P46060 587 aaPredicted RBP26.36■■□□□ 1.81
PSMC3-201ENST00000298852 DNAJC5Q9H3Z4 198 aa26.33■■□□□ 1.81
PSMC3-201ENST00000298852 ARAP1Q96P48 1450 aa26.32■■□□□ 1.8
PSMC3-201ENST00000298852 FHOD3Q2V2M9 1422 aa26.32■■□□□ 1.8
PSMC3-201ENST00000298852 PTPRGP23470 1445 aa26.29■■□□□ 1.8
PSMC3-201ENST00000298852 FMN1Q68DA7 1419 aa26.29■■□□□ 1.8
PSMC3-201ENST00000298852 P3H3Q8IVL6 736 aa26.27■■□□□ 1.8
PSMC3-201ENST00000298852 ABCA8O94911 1581 aa26.19■■□□□ 1.78
PSMC3-201ENST00000298852 RAPGEF6Q8TEU7 1601 aa26.16■■□□□ 1.78
PSMC3-201ENST00000298852 VPS8Q8N3P4 1428 aa26.16■■□□□ 1.78
PSMC3-201ENST00000298852 UHRF1BP1LA0JNW5 1464 aa26.15■■□□□ 1.78
PSMC3-201ENST00000298852 UACAQ9BZF9 1416 aa26.15■■□□□ 1.78
PSMC3-201ENST00000298852 PLB1Q6P1J6 1458 aa26.13■■□□□ 1.77
PSMC3-201ENST00000298852 ABCC2Q92887 1545 aa26.13■■□□□ 1.77
PSMC3-201ENST00000298852 CASKIN1Q8WXD9 1431 aa26.12■■□□□ 1.77
PSMC3-201ENST00000298852 FYCO1Q9BQS8 1478 aa26.12■■□□□ 1.77
PSMC3-201ENST00000298852 PCF11O94913 1555 aaKnown RBP26.1■■□□□ 1.77
PSMC3-201ENST00000298852 HECW1Q76N89 1606 aa26.09■■□□□ 1.77
PSMC3-201ENST00000298852 TTBK1Q5TCY1 1321 aaPredicted RBP26.08■■□□□ 1.77
PSMC3-201ENST00000298852 ADCY10Q96PN6 1610 aa26.08■■□□□ 1.77
PSMC3-201ENST00000298852 CYB5RLQ6IPT4 315 aa26.06■■□□□ 1.76
PSMC3-201ENST00000298852 NUP153P49790 1475 aaKnown RBP26.05■■□□□ 1.76
PSMC3-201ENST00000298852 KDM5BQ9UGL1 1544 aa26.01■■□□□ 1.75
PSMC3-201ENST00000298852 CCDC18Q5T9S5 1454 aa25.99■■□□□ 1.75
PSMC3-201ENST00000298852 EPRSP07814 1512 aaKnown RBP25.98■■□□□ 1.75
PSMC3-201ENST00000298852 LRRIQ1Q96JM4 1722 aa25.97■■□□□ 1.75
PSMC3-201ENST00000298852 MAP3K1Q13233 1512 aa25.94■■□□□ 1.74
PSMC3-201ENST00000298852 ATP10BO94823 1461 aa25.94■■□□□ 1.74
PSMC3-201ENST00000298852 ZCCHC11Q5TAX3 1644 aaKnown RBP25.93■■□□□ 1.74
PSMC3-201ENST00000298852 CFAP43Q8NDM7 1665 aa25.9■■□□□ 1.74
PSMC3-201ENST00000298852 ATP1B4Q9UN42 357 aaPredicted RBP25.88■■□□□ 1.73
PSMC3-201ENST00000298852 NPM1P06748 294 aaKnown RBP eCLIP25.88■■□□□ 1.73
PSMC3-201ENST00000298852 CDK13Q14004 1512 aaKnown RBP25.87■■□□□ 1.73
PSMC3-201ENST00000298852 TIAM1Q13009 1591 aa25.86■■□□□ 1.73
PSMC3-201ENST00000298852 MAPKBP1O60336 1514 aa25.86■■□□□ 1.73
PSMC3-201ENST00000298852 CDK11AQ9UQ88 783 aaPredicted RBP25.82■■□□□ 1.72
PSMC3-201ENST00000298852 APLP2Q06481 763 aa25.8■■□□□ 1.72
PSMC3-201ENST00000298852 ARID3CA6NKF2 412 aa25.78■■□□□ 1.72
PSMC3-201ENST00000298852 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.77■■□□□ 1.72
PSMC3-201ENST00000298852 HNRNPUL2Q1KMD3 747 aaKnown RBP25.77■■□□□ 1.72
PSMC3-201ENST00000298852 WDR7Q9Y4E6 1490 aa25.76■■□□□ 1.71
PSMC3-201ENST00000298852 ASXL2Q76L83 1435 aa25.76■■□□□ 1.71
PSMC3-201ENST00000298852 PLEKHD1A6NEE1 506 aa25.74■■□□□ 1.71
PSMC3-201ENST00000298852 EHBP1L1Q8N3D4 1523 aa25.74■■□□□ 1.71
PSMC3-201ENST00000298852 TROQ12816 1431 aaPredicted RBP25.73■■□□□ 1.71
PSMC3-201ENST00000298852 LRRC9Q6ZRR7 1453 aa25.73■■□□□ 1.71
PSMC3-201ENST00000298852 MAGI3Q5TCQ9 1506 aa25.72■■□□□ 1.71
PSMC3-201ENST00000298852 MTUS2Q5JR59 1369 aa25.7■■□□□ 1.7
PSMC3-201ENST00000298852 KIF14Q15058 1648 aa25.66■■□□□ 1.7
PSMC3-201ENST00000298852 SUPT6HQ7KZ85 1726 aaKnown RBP25.63■■□□□ 1.69
PSMC3-201ENST00000298852 KANK4Q5T7N3 995 aaPredicted RBP25.63■■□□□ 1.69
PSMC3-201ENST00000298852 ABCC10Q5T3U5 1492 aa25.61■■□□□ 1.69
PSMC3-201ENST00000298852 GLI2P10070 1586 aa25.61■■□□□ 1.69
PSMC3-201ENST00000298852 DIP2BQ9P265 1576 aa25.6■■□□□ 1.69
PSMC3-201ENST00000298852 ABCA9Q8IUA7 1624 aa25.59■■□□□ 1.69
PSMC3-201ENST00000298852 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.56■■□□□ 1.683e-6■■□□□ 14
PSMC3-201ENST00000298852 KIF13AQ9H1H9 1805 aa25.55■■□□□ 1.68
PSMC3-201ENST00000298852 NCOA2Q15596 1464 aa25.55■■□□□ 1.68
PSMC3-201ENST00000298852 KCNH8Q96L42 1107 aa25.53■■□□□ 1.68
PSMC3-201ENST00000298852 TTC37Q6PGP7 1564 aa25.52■■□□□ 1.68
PSMC3-201ENST00000298852 MAP3K4Q9Y6R4 1608 aa25.5■■□□□ 1.67
PSMC3-201ENST00000298852 MYO5CQ9NQX4 1742 aa25.49■■□□□ 1.67
PSMC3-201ENST00000298852 ARAP3Q8WWN8 1544 aa25.48■■□□□ 1.67
PSMC3-201ENST00000298852 ITSN2Q9NZM3 1697 aa25.48■■□□□ 1.67
PSMC3-201ENST00000298852 CDC42BPAQ5VT25 1732 aa25.47■■□□□ 1.67
PSMC3-201ENST00000298852 PREX2Q70Z35 1606 aa25.45■■□□□ 1.67
PSMC3-201ENST00000298852 FAM69CQ0P6D2 419 aa25.45■■□□□ 1.66
PSMC3-201ENST00000298852 CCNB3Q8WWL7 1395 aa25.44■■□□□ 1.66
PSMC3-201ENST00000298852 GPATCH8Q9UKJ3 1502 aaKnown RBP25.43■■□□□ 1.66
PSMC3-201ENST00000298852 PLCH2O75038 1416 aa25.43■■□□□ 1.66
PSMC3-201ENST00000298852 CD109Q6YHK3 1445 aa25.43■■□□□ 1.66
PSMC3-201ENST00000298852 MYOM3Q5VTT5 1437 aa25.42■■□□□ 1.66
PSMC3-201ENST00000298852 CDC42BPBQ9Y5S2 1711 aa25.41■■□□□ 1.66
PSMC3-201ENST00000298852 PHLDB1Q86UU1 1377 aa25.4■■□□□ 1.66
PSMC3-201ENST00000298852 PPARGC1BQ86YN6 1023 aaKnown RBP25.38■■□□□ 1.65
PSMC3-201ENST00000298852 MIA2Q96PC5 1412 aa25.38■■□□□ 1.65
PSMC3-201ENST00000298852 CFAP74Q9C0B2 1584 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms