RNA–Protein interactions for RNA: ENST00000298274.12

PCDH11X-201, Transcript of protocadherin 11 X-linked, humanhuman

TSL 1 (best)

Gene PCDH11X, Length 4,767 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-201ENST00000298274 BIVM-ERCC5R4GMW8 1640 aa17.49■□□□□ 0.39
PCDH11X-201ENST00000298274 ITGAEP38570 1179 aa17.48■□□□□ 0.39
PCDH11X-201ENST00000298274 MAGI1Q96QZ7 1491 aaPredicted RBP17.48■□□□□ 0.39
PCDH11X-201ENST00000298274 WDR97A6NE52 1622 aa17.47■□□□□ 0.39
PCDH11X-201ENST00000298274 CUL7Q14999 1698 aa17.46■□□□□ 0.39
PCDH11X-201ENST00000298274 KIF21BO75037 1637 aa17.45■□□□□ 0.38
PCDH11X-201ENST00000298274 JPH4Q96JJ6 628 aa17.44■□□□□ 0.38
PCDH11X-201ENST00000298274 URB2Q14146 1524 aaKnown RBP17.42■□□□□ 0.38
PCDH11X-201ENST00000298274 TSPY4P0CV99 314 aa17.42■□□□□ 0.38
PCDH11X-201ENST00000298274 TSPY10P0CW01 314 aa17.42■□□□□ 0.38
PCDH11X-201ENST00000298274 AQRO60306 1485 aaKnown RBP eCLIP17.42■□□□□ 0.38
PCDH11X-201ENST00000298274 PPARGC1BQ86YN6 1023 aaKnown RBP17.41■□□□□ 0.38
PCDH11X-201ENST00000298274 VPS8Q8N3P4 1428 aa17.4■□□□□ 0.38
PCDH11X-201ENST00000298274 ESF1Q9H501 851 aaKnown RBP17.4■□□□□ 0.38
PCDH11X-201ENST00000298274 WDR62O43379 1518 aa17.38■□□□□ 0.37
PCDH11X-201ENST00000298274 ZNF777Q9ULD5 760 aaPredicted RBP17.38■□□□□ 0.37
PCDH11X-201ENST00000298274 SYNJ2O15056 1496 aa17.37■□□□□ 0.37
PCDH11X-201ENST00000298274 ARID3CA6NKF2 412 aa17.36■□□□□ 0.37
PCDH11X-201ENST00000298274 EFCAB5A4FU69 1503 aa17.36■□□□□ 0.37
PCDH11X-201ENST00000298274 TRIM52Q96A61 297 aa17.35■□□□□ 0.37
PCDH11X-201ENST00000298274 SNAPC4Q5SXM2 1469 aa17.35■□□□□ 0.37
PCDH11X-201ENST00000298274 PTPRGP23470 1445 aa17.35■□□□□ 0.37
PCDH11X-201ENST00000298274 CCNB3Q8WWL7 1395 aa17.31■□□□□ 0.36
PCDH11X-201ENST00000298274 PRXQ9BXM0 1461 aa17.3■□□□□ 0.36
PCDH11X-201ENST00000298274 KIAA0586Q9BVV6 1533 aa17.29■□□□□ 0.36
PCDH11X-201ENST00000298274 CCDC18Q5T9S5 1454 aa17.28■□□□□ 0.36
PCDH11X-201ENST00000298274 CFDP1Q9UEE9 299 aaPredicted RBP17.28■□□□□ 0.36
PCDH11X-201ENST00000298274 KCNH8Q96L42 1107 aa17.24■□□□□ 0.35
PCDH11X-201ENST00000298274 KIF21AQ7Z4S6 1674 aa17.24■□□□□ 0.35
PCDH11X-201ENST00000298274 RSPH4AQ5TD94 716 aa17.24■□□□□ 0.35
PCDH11X-201ENST00000298274 ARHGAP35Q9NRY4 1499 aa17.21■□□□□ 0.35
PCDH11X-201ENST00000298274 RUSC2Q8N2Y8 1516 aa17.21■□□□□ 0.35
PCDH11X-201ENST00000298274 GRIN2AQ12879 1464 aa17.21■□□□□ 0.35
PCDH11X-201ENST00000298274 EFCAB2Q5VUJ9 269 aa17.19■□□□□ 0.34
PCDH11X-201ENST00000298274 FHOD3Q2V2M9 1422 aa17.18■□□□□ 0.34
PCDH11X-201ENST00000298274 IQGAP2Q13576 1575 aa17.16■□□□□ 0.34
PCDH11X-201ENST00000298274 PRG4Q92954 1404 aaPredicted RBP17.16■□□□□ 0.34
PCDH11X-201ENST00000298274 CASKIN1Q8WXD9 1431 aa17.11■□□□□ 0.33
PCDH11X-201ENST00000298274 FYCO1Q9BQS8 1478 aa17.11■□□□□ 0.33
PCDH11X-201ENST00000298274 KANK1Q14678 1352 aa17.07■□□□□ 0.32
PCDH11X-201ENST00000298274 TRHP20396 242 aaPredicted RBP17.07■□□□□ 0.32
PCDH11X-201ENST00000298274 HECW1Q76N89 1606 aa17.06■□□□□ 0.32
PCDH11X-201ENST00000298274 ZNF608Q9ULD9 1512 aaPredicted RBP17.05■□□□□ 0.32
PCDH11X-201ENST00000298274 ADAMTS12P58397 1594 aa17.05■□□□□ 0.32
PCDH11X-201ENST00000298274 EIF4G3O43432 1585 aaKnown RBP17.03■□□□□ 0.32
PCDH11X-201ENST00000298274 STAG3Q9UJ98 1225 aa17.01■□□□□ 0.31
PCDH11X-201ENST00000298274 UACAQ9BZF9 1416 aa16.99■□□□□ 0.31
PCDH11X-201ENST00000298274 CYB5RLQ6IPT4 315 aa16.99■□□□□ 0.31
PCDH11X-201ENST00000298274 ANKRD30AQ9BXX3 1397 aa16.98■□□□□ 0.31
PCDH11X-201ENST00000298274 ABCA5Q8WWZ7 1642 aa16.98■□□□□ 0.31
PCDH11X-201ENST00000298274 THOC2Q8NI27 1593 aaKnown RBP16.98■□□□□ 0.31
PCDH11X-201ENST00000298274 PLEKHH2Q8IVE3 1493 aa16.98■□□□□ 0.31
PCDH11X-201ENST00000298274 PBRM1Q86U86 1689 aa16.95■□□□□ 0.3
PCDH11X-201ENST00000298274 CHIC2Q9UKJ5 165 aa16.95■□□□□ 0.3
PCDH11X-201ENST00000298274 EHBP1L1Q8N3D4 1523 aa16.94■□□□□ 0.3
PCDH11X-201ENST00000298274 CLSPNQ9HAW4 1339 aa16.93■□□□□ 0.3
PCDH11X-201ENST00000298274 TONSLQ96HA7 1378 aa16.93■□□□□ 0.3
PCDH11X-201ENST00000298274 TARBP1Q13395 1621 aaKnown RBP16.92■□□□□ 0.3
PCDH11X-201ENST00000298274 ARID4BQ4LE39 1312 aaPredicted RBP16.92■□□□□ 0.3
PCDH11X-201ENST00000298274 NUP160Q12769 1436 aa16.91■□□□□ 0.3
PCDH11X-201ENST00000298274 UGGT2Q9NYU1 1516 aa16.9■□□□□ 0.3
PCDH11X-201ENST00000298274 MAP3K1Q13233 1512 aa16.9■□□□□ 0.3
PCDH11X-201ENST00000298274 HDGFP51858 240 aaKnown RBP16.89■□□□□ 0.3
PCDH11X-201ENST00000298274 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.88■□□□□ 0.29
PCDH11X-201ENST00000298274 CTTNBP2Q8WZ74 1663 aa16.88■□□□□ 0.29
PCDH11X-201ENST00000298274 TROQ12816 1431 aaPredicted RBP16.88■□□□□ 0.29
PCDH11X-201ENST00000298274 MYOM3Q5VTT5 1437 aa16.88■□□□□ 0.29
PCDH11X-201ENST00000298274 SPAG9O60271 1321 aaKnown RBP16.87■□□□□ 0.29
PCDH11X-201ENST00000298274 BCANQ96GW7 911 aa16.87■□□□□ 0.29
PCDH11X-201ENST00000298274 SLC4A1APQ9BWU0 796 aaKnown RBP16.87■□□□□ 0.29
PCDH11X-201ENST00000298274 NEUROD1Q13562 356 aa16.86■□□□□ 0.29
PCDH11X-201ENST00000298274 RRP7BPQ9NSQ0 103 aa16.85■□□□□ 0.29
PCDH11X-201ENST00000298274 HRCP23327 699 aa16.84■□□□□ 0.29
PCDH11X-201ENST00000298274 LRRC9Q6ZRR7 1453 aa16.84■□□□□ 0.29
PCDH11X-201ENST00000298274 MIA2Q96PC5 1412 aa16.83■□□□□ 0.28
PCDH11X-201ENST00000298274 PLB1Q6P1J6 1458 aa16.83■□□□□ 0.28
PCDH11X-201ENST00000298274 ARAP1Q96P48 1450 aa16.83■□□□□ 0.28
PCDH11X-201ENST00000298274 SETD5Q9C0A6 1442 aa16.81■□□□□ 0.28
PCDH11X-201ENST00000298274 SLC24A1O60721 1099 aa16.81■□□□□ 0.28
PCDH11X-201ENST00000298274 FAM69CQ0P6D2 419 aa16.81■□□□□ 0.28
PCDH11X-201ENST00000298274 TIMELESSQ9UNS1 1208 aa16.8■□□□□ 0.28
PCDH11X-201ENST00000298274 CHGAP10645 457 aaKnown RBP16.8■□□□□ 0.28
PCDH11X-201ENST00000298274 KANK4Q5T7N3 995 aaPredicted RBP16.78■□□□□ 0.28
PCDH11X-201ENST00000298274 EPRSP07814 1512 aaKnown RBP16.77■□□□□ 0.28
PCDH11X-201ENST00000298274 PHLDB1Q86UU1 1377 aa16.77■□□□□ 0.28
PCDH11X-201ENST00000298274 TIAM1Q13009 1591 aa16.75■□□□□ 0.27
PCDH11X-201ENST00000298274 SUPT6HQ7KZ85 1726 aaKnown RBP16.75■□□□□ 0.27
PCDH11X-201ENST00000298274 NCOA2Q15596 1464 aa16.75■□□□□ 0.27
PCDH11X-201ENST00000298274 PELP1Q8IZL8 1130 aaKnown RBP16.75■□□□□ 0.27
PCDH11X-201ENST00000298274 ARHGAP5Q13017 1502 aa16.75■□□□□ 0.27
PCDH11X-201ENST00000298274 KIAA0556O60303 1618 aa16.74■□□□□ 0.27
PCDH11X-201ENST00000298274 FGD6Q6ZV73 1430 aa16.74■□□□□ 0.27
PCDH11X-201ENST00000298274 KIF14Q15058 1648 aa16.73■□□□□ 0.27
PCDH11X-201ENST00000298274 ZNF326Q5BKZ1 582 aaKnown RBP16.73■□□□□ 0.27
PCDH11X-201ENST00000298274 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.73■□□□□ 0.27
PCDH11X-201ENST00000298274 PPP1R15AO75807 674 aaPredicted RBP16.73■□□□□ 0.27
PCDH11X-201ENST00000298274 RAPGEF6Q8TEU7 1601 aa16.71■□□□□ 0.27
PCDH11X-201ENST00000298274 POLR3GLQ9BT43 218 aa16.69■□□□□ 0.26
PCDH11X-201ENST00000298274 TEX14Q8IWB6 1497 aa16.69■□□□□ 0.26
PCDH11X-201ENST00000298274 CENPBP07199 599 aaPredicted RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms