RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 NUP160Q12769 1436 aa24.57■■□□□ 1.52
CCDC140-201ENST00000295226 OSCARQ8IYS5 282 aa24.56■■□□□ 1.52
CCDC140-201ENST00000295226 TNIKQ9UKE5 1360 aa24.5■■□□□ 1.51
CCDC140-201ENST00000295226 CTTNBP2Q8WZ74 1663 aa24.49■■□□□ 1.51
CCDC140-201ENST00000295226 KIAA0586Q9BVV6 1533 aa24.48■■□□□ 1.51
CCDC140-201ENST00000295226 IQGAP2Q13576 1575 aa24.43■■□□□ 1.5
CCDC140-201ENST00000295226 JPH4Q96JJ6 628 aa24.43■■□□□ 1.5
CCDC140-201ENST00000295226 CLASP1Q7Z460 1538 aa24.43■■□□□ 1.5
CCDC140-201ENST00000295226 P3H3Q8IVL6 736 aa24.36■■□□□ 1.49
CCDC140-201ENST00000295226 CEP162Q5TB80 1403 aa24.34■■□□□ 1.49
CCDC140-201ENST00000295226 CLIP1P30622 1438 aa24.3■■□□□ 1.48
CCDC140-201ENST00000295226 PRG4Q92954 1404 aaPredicted RBP24.3■■□□□ 1.48
CCDC140-201ENST00000295226 UGGT2Q9NYU1 1516 aa24.3■■□□□ 1.48
CCDC140-201ENST00000295226 SHROOM2Q13796 1616 aa24.28■■□□□ 1.48
CCDC140-201ENST00000295226 ERCC6L2Q5T890 1561 aa24.27■■□□□ 1.48
CCDC140-201ENST00000295226 DISP1Q96F81 1524 aa24.26■■□□□ 1.47
CCDC140-201ENST00000295226 TTBK1Q5TCY1 1321 aaPredicted RBP24.26■■□□□ 1.47
CCDC140-201ENST00000295226 ARHGAP35Q9NRY4 1499 aa24.25■■□□□ 1.47
CCDC140-201ENST00000295226 FHOD3Q2V2M9 1422 aa24.21■■□□□ 1.47
CCDC140-201ENST00000295226 SAMD9Q5K651 1589 aa24.21■■□□□ 1.47
CCDC140-201ENST00000295226 KIAA0556O60303 1618 aa24.19■■□□□ 1.46
CCDC140-201ENST00000295226 CARMIL2Q6F5E8 1435 aa24.19■■□□□ 1.46
CCDC140-201ENST00000295226 EFCAB5A4FU69 1503 aa24.17■■□□□ 1.46
CCDC140-201ENST00000295226 ARAP1Q96P48 1450 aa24.17■■□□□ 1.46
CCDC140-201ENST00000295226 ARHGEF11O15085 1522 aa24.11■■□□□ 1.45
CCDC140-201ENST00000295226 PTPRGP23470 1445 aa24.08■■□□□ 1.44
CCDC140-201ENST00000295226 RIMBP3CA6NJZ7 1639 aa24.07■■□□□ 1.44
CCDC140-201ENST00000295226 RIMBP3BA6NNM3 1639 aa24.07■■□□□ 1.44
CCDC140-201ENST00000295226 RIMBP3Q9UFD9 1639 aa24.07■■□□□ 1.44
CCDC140-201ENST00000295226 DNAJC5Q9H3Z4 198 aa24.03■■□□□ 1.44
CCDC140-201ENST00000295226 ATP1B4Q9UN42 357 aaPredicted RBP24.01■■□□□ 1.43
CCDC140-201ENST00000295226 CYB5RLQ6IPT4 315 aa23.99■■□□□ 1.43
CCDC140-201ENST00000295226 PLB1Q6P1J6 1458 aa23.98■■□□□ 1.43
CCDC140-201ENST00000295226 FMN1Q68DA7 1419 aa23.98■■□□□ 1.43
CCDC140-201ENST00000295226 VPS8Q8N3P4 1428 aa23.97■■□□□ 1.43
CCDC140-201ENST00000295226 ARID3CA6NKF2 412 aa23.96■■□□□ 1.43
CCDC140-201ENST00000295226 PCF11O94913 1555 aaKnown RBP23.91■■□□□ 1.42
CCDC140-201ENST00000295226 UACAQ9BZF9 1416 aa23.91■■□□□ 1.42
CCDC140-201ENST00000295226 ABCA8O94911 1581 aa23.9■■□□□ 1.42
CCDC140-201ENST00000295226 CASKIN1Q8WXD9 1431 aa23.89■■□□□ 1.41
CCDC140-201ENST00000295226 RAPGEF6Q8TEU7 1601 aa23.88■■□□□ 1.41
CCDC140-201ENST00000295226 NUP153P49790 1475 aaKnown RBP23.84■■□□□ 1.41
CCDC140-201ENST00000295226 FYCO1Q9BQS8 1478 aa23.83■■□□□ 1.41
CCDC140-201ENST00000295226 ADCY10Q96PN6 1610 aa23.82■■□□□ 1.4
CCDC140-201ENST00000295226 ABCC2Q92887 1545 aa23.82■■□□□ 1.4
CCDC140-201ENST00000295226 LRRIQ1Q96JM4 1722 aa23.8■■□□□ 1.4
CCDC140-201ENST00000295226 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.79■■□□□ 1.4
CCDC140-201ENST00000295226 HNRNPUL2Q1KMD3 747 aaKnown RBP23.79■■□□□ 1.4
CCDC140-201ENST00000295226 HECW1Q76N89 1606 aa23.79■■□□□ 1.4
CCDC140-201ENST00000295226 UHRF1BP1LA0JNW5 1464 aa23.79■■□□□ 1.4
CCDC140-201ENST00000295226 CDK13Q14004 1512 aaKnown RBP23.78■■□□□ 1.4
CCDC140-201ENST00000295226 PPARGC1BQ86YN6 1023 aaKnown RBP23.77■■□□□ 1.4
CCDC140-201ENST00000295226 ATP10BO94823 1461 aa23.77■■□□□ 1.4
CCDC140-201ENST00000295226 EPRSP07814 1512 aaKnown RBP23.76■■□□□ 1.39
CCDC140-201ENST00000295226 APLP2Q06481 763 aa23.74■■□□□ 1.39
CCDC140-201ENST00000295226 KANK4Q5T7N3 995 aaPredicted RBP23.7■■□□□ 1.39
CCDC140-201ENST00000295226 KDM5BQ9UGL1 1544 aa23.7■■□□□ 1.38
CCDC140-201ENST00000295226 NPM1P06748 294 aaKnown RBP eCLIP23.7■■□□□ 1.38
CCDC140-201ENST00000295226 ZCCHC11Q5TAX3 1644 aaKnown RBP23.69■■□□□ 1.38
CCDC140-201ENST00000295226 CCDC18Q5T9S5 1454 aa23.67■■□□□ 1.38
CCDC140-201ENST00000295226 TIAM1Q13009 1591 aa23.66■■□□□ 1.38
CCDC140-201ENST00000295226 CFAP43Q8NDM7 1665 aa23.63■■□□□ 1.37
CCDC140-201ENST00000295226 MAGI3Q5TCQ9 1506 aa23.62■■□□□ 1.37
CCDC140-201ENST00000295226 PLEKHD1A6NEE1 506 aa23.62■■□□□ 1.37
CCDC140-201ENST00000295226 MAP3K1Q13233 1512 aa23.6■■□□□ 1.37
CCDC140-201ENST00000295226 CDK11AQ9UQ88 783 aaPredicted RBP23.6■■□□□ 1.37
CCDC140-201ENST00000295226 MTUS2Q5JR59 1369 aa23.58■■□□□ 1.37
CCDC140-201ENST00000295226 KCNH8Q96L42 1107 aa23.58■■□□□ 1.37
CCDC140-201ENST00000295226 LRRC9Q6ZRR7 1453 aa23.58■■□□□ 1.36
CCDC140-201ENST00000295226 ASXL2Q76L83 1435 aa23.57■■□□□ 1.36
CCDC140-201ENST00000295226 TROQ12816 1431 aaPredicted RBP23.53■■□□□ 1.36
CCDC140-201ENST00000295226 WDR7Q9Y4E6 1490 aa23.5■■□□□ 1.35
CCDC140-201ENST00000295226 EHBP1L1Q8N3D4 1523 aa23.48■■□□□ 1.35
CCDC140-201ENST00000295226 MAPKBP1O60336 1514 aa23.48■■□□□ 1.35
CCDC140-201ENST00000295226 KIF14Q15058 1648 aa23.47■■□□□ 1.35
CCDC140-201ENST00000295226 NCOA2Q15596 1464 aa23.42■■□□□ 1.34
CCDC140-201ENST00000295226 SUPT6HQ7KZ85 1726 aaKnown RBP23.41■■□□□ 1.34
CCDC140-201ENST00000295226 FAM69CQ0P6D2 419 aa23.38■■□□□ 1.33
CCDC140-201ENST00000295226 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.38■■□□□ 1.33
CCDC140-201ENST00000295226 PHLDB1Q86UU1 1377 aa23.38■■□□□ 1.33
CCDC140-201ENST00000295226 ABCC10Q5T3U5 1492 aa23.36■■□□□ 1.33
CCDC140-201ENST00000295226 TTC37Q6PGP7 1564 aa23.36■■□□□ 1.33
CCDC140-201ENST00000295226 CCNB3Q8WWL7 1395 aa23.33■■□□□ 1.33
CCDC140-201ENST00000295226 DIP2BQ9P265 1576 aa23.32■■□□□ 1.32
CCDC140-201ENST00000295226 TRHP20396 242 aaPredicted RBP23.31■■□□□ 1.32
CCDC140-201ENST00000295226 GPATCH8Q9UKJ3 1502 aaKnown RBP23.3■■□□□ 1.32
CCDC140-201ENST00000295226 ABCA9Q8IUA7 1624 aa23.29■■□□□ 1.32
CCDC140-201ENST00000295226 KIF13AQ9H1H9 1805 aa23.27■■□□□ 1.32
CCDC140-201ENST00000295226 CDC42BPAQ5VT25 1732 aa23.27■■□□□ 1.32
CCDC140-201ENST00000295226 MYOM3Q5VTT5 1437 aa23.27■■□□□ 1.31
CCDC140-201ENST00000295226 CD109Q6YHK3 1445 aa23.27■■□□□ 1.31
CCDC140-201ENST00000295226 GLI2P10070 1586 aa23.26■■□□□ 1.31
CCDC140-201ENST00000295226 CFDP1Q9UEE9 299 aaPredicted RBP23.25■■□□□ 1.31
CCDC140-201ENST00000295226 ZNF777Q9ULD5 760 aaPredicted RBP23.25■■□□□ 1.31
CCDC140-201ENST00000295226 ZNF644Q9H582 1327 aaPredicted RBP23.23■■□□□ 1.31
CCDC140-201ENST00000295226 PLCH2O75038 1416 aa23.23■■□□□ 1.31
CCDC140-201ENST00000295226 MYO5CQ9NQX4 1742 aa23.23■■□□□ 1.31
CCDC140-201ENST00000295226 CDC42BPBQ9Y5S2 1711 aa23.23■■□□□ 1.31
CCDC140-201ENST00000295226 TSPOAP1O95153 1857 aa23.22■■□□□ 1.31
CCDC140-201ENST00000295226 MAP3K4Q9Y6R4 1608 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms