RNA–Protein interactions for RNA: ENST00000293373.10

NCKAP1L-201, Transcript of NCK associated protein 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCKAP1L, Length 9,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1L-201ENST00000293373 ABCC8Q09428 1581 aa10.82□□□□□ -0.68
NCKAP1L-201ENST00000293373 CCNB3Q8WWL7 1395 aa10.82□□□□□ -0.68
NCKAP1L-201ENST00000293373 WIZO95785 1651 aa10.78□□□□□ -0.68
NCKAP1L-201ENST00000293373 PLPPR3Q6T4P5 718 aa10.78□□□□□ -0.68
NCKAP1L-201ENST00000293373 PPP1R15AO75807 674 aaPredicted RBP10.77□□□□□ -0.69
NCKAP1L-201ENST00000293373 ZBTB47Q9UFB7 747 aaPredicted RBP10.76□□□□□ -0.69
NCKAP1L-201ENST00000293373 FANCD2Q9BXW9 1451 aa10.76□□□□□ -0.69
NCKAP1L-201ENST00000293373 FMN1Q68DA7 1419 aa10.75□□□□□ -0.69
NCKAP1L-201ENST00000293373 CLSPNQ9HAW4 1339 aa10.75□□□□□ -0.69
NCKAP1L-201ENST00000293373 NCAPD3P42695 1498 aa10.75□□□□□ -0.69
NCKAP1L-201ENST00000293373 CANXP27824 592 aaKnown RBP10.75□□□□□ -0.69
NCKAP1L-201ENST00000293373 ARID4BQ4LE39 1312 aaPredicted RBP10.75□□□□□ -0.69
NCKAP1L-201ENST00000293373 TDRD9Q8NDG6 1382 aaKnown RBP10.74□□□□□ -0.69
NCKAP1L-201ENST00000293373 RRP7BPQ9NSQ0 103 aa10.74□□□□□ -0.69
NCKAP1L-201ENST00000293373 RAPGEF2Q9Y4G8 1499 aa10.73□□□□□ -0.69
NCKAP1L-201ENST00000293373 KANK1Q14678 1352 aa10.72□□□□□ -0.69
NCKAP1L-201ENST00000293373 VPS8Q8N3P4 1428 aa10.7□□□□□ -0.7
NCKAP1L-201ENST00000293373 SLC24A1O60721 1099 aa10.69□□□□□ -0.7
NCKAP1L-201ENST00000293373 ARHGAP35Q9NRY4 1499 aa10.69□□□□□ -0.7
NCKAP1L-201ENST00000293373 CDCA8Q53HL2 280 aa10.65□□□□□ -0.7
NCKAP1L-201ENST00000293373 KDM2AQ9Y2K7 1162 aa10.65□□□□□ -0.7
NCKAP1L-201ENST00000293373 TRHP20396 242 aaPredicted RBP10.63□□□□□ -0.71
NCKAP1L-201ENST00000293373 HMGXB3Q12766 1538 aa10.63□□□□□ -0.71
NCKAP1L-201ENST00000293373 EIF4G2P78344 907 aaKnown RBP eCLIP10.62□□□□□ -0.711e-7■■■■■ 43.4
NCKAP1L-201ENST00000293373 HDGFP51858 240 aaKnown RBP10.62□□□□□ -0.71
NCKAP1L-201ENST00000293373 C14orf37Q86TY3 774 aa10.61□□□□□ -0.71
NCKAP1L-201ENST00000293373 CCDC18Q5T9S5 1454 aa10.6□□□□□ -0.71
NCKAP1L-201ENST00000293373 EFCAB2Q5VUJ9 269 aa10.6□□□□□ -0.71
NCKAP1L-201ENST00000293373 WDR43Q15061 677 aaKnown RBP eCLIP10.59□□□□□ -0.71
NCKAP1L-201ENST00000293373 FGD5Q6ZNL6 1462 aa10.59□□□□□ -0.71
NCKAP1L-201ENST00000293373 GAPVD1Q14C86 1478 aa10.56□□□□□ -0.72
NCKAP1L-201ENST00000293373 ANKRD30AQ9BXX3 1397 aa10.56□□□□□ -0.72
NCKAP1L-201ENST00000293373 MRC2Q9UBG0 1479 aa10.56□□□□□ -0.72
NCKAP1L-201ENST00000293373 FHOD3Q2V2M9 1422 aa10.55□□□□□ -0.72
NCKAP1L-201ENST00000293373 OSCARQ8IYS5 282 aa10.55□□□□□ -0.72
NCKAP1L-201ENST00000293373 RSPH4AQ5TD94 716 aa10.55□□□□□ -0.72
NCKAP1L-201ENST00000293373 SCAF1Q9H7N4 1312 aaKnown RBP10.54□□□□□ -0.72
NCKAP1L-201ENST00000293373 TMC1Q8TDI8 760 aa10.54□□□□□ -0.72
NCKAP1L-201ENST00000293373 CFTRP13569 1480 aa10.54□□□□□ -0.72
NCKAP1L-201ENST00000293373 DDX10Q13206 875 aaKnown RBP10.54□□□□□ -0.72
NCKAP1L-201ENST00000293373 PTPRGP23470 1445 aa10.54□□□□□ -0.72
NCKAP1L-201ENST00000293373 TIMELESSQ9UNS1 1208 aa10.53□□□□□ -0.72
NCKAP1L-201ENST00000293373 SETD5Q9C0A6 1442 aa10.53□□□□□ -0.72
NCKAP1L-201ENST00000293373 RGL3Q3MIN7 710 aa10.53□□□□□ -0.72
NCKAP1L-201ENST00000293373 CARD11Q9BXL7 1154 aa10.53□□□□□ -0.72
NCKAP1L-201ENST00000293373 CFAP53Q96M91 514 aa10.53□□□□□ -0.72
NCKAP1L-201ENST00000293373 CC2D2AQ9P2K1 1620 aa10.53□□□□□ -0.72
NCKAP1L-201ENST00000293373 JPH4Q96JJ6 628 aa10.52□□□□□ -0.72
NCKAP1L-201ENST00000293373 IFT140Q96RY7 1462 aa10.52□□□□□ -0.73
NCKAP1L-201ENST00000293373 POGKQ9P215 609 aa10.52□□□□□ -0.73
NCKAP1L-201ENST00000293373 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.51□□□□□ -0.73
NCKAP1L-201ENST00000293373 RTL5Q5HYW3 569 aaPredicted RBP10.51□□□□□ -0.73
NCKAP1L-201ENST00000293373 KNSTRNQ9Y448 316 aa10.51□□□□□ -0.73
NCKAP1L-201ENST00000293373 MRS2Q9HD23 443 aa10.5□□□□□ -0.73
NCKAP1L-201ENST00000293373 GRIN2BQ13224 1484 aa10.5□□□□□ -0.73
NCKAP1L-201ENST00000293373 FAM9BQ8IZU0 186 aa10.49□□□□□ -0.73
NCKAP1L-201ENST00000293373 RAD54L2Q9Y4B4 1467 aa10.49□□□□□ -0.73
NCKAP1L-201ENST00000293373 HAP1P54257 671 aaPredicted RBP10.49□□□□□ -0.73
NCKAP1L-201ENST00000293373 HNRNPUQ00839 825 aaKnown RBP eCLIP10.49□□□□□ -0.73
NCKAP1L-201ENST00000293373 IGF1RP08069 1367 aa10.47□□□□□ -0.73
NCKAP1L-201ENST00000293373 MLECQ14165 292 aa10.46□□□□□ -0.73
NCKAP1L-201ENST00000293373 ZBTB7CA1YPR0 619 aa10.45□□□□□ -0.74
NCKAP1L-201ENST00000293373 SPAG9O60271 1321 aaKnown RBP10.45□□□□□ -0.74
NCKAP1L-201ENST00000293373 KANK4Q5T7N3 995 aaPredicted RBP10.45□□□□□ -0.74
NCKAP1L-201ENST00000293373 NPM2Q86SE8 214 aaKnown RBP10.45□□□□□ -0.74
NCKAP1L-201ENST00000293373 EIF3AQ14152 1382 aaKnown RBP10.45□□□□□ -0.74
NCKAP1L-201ENST00000293373 GGT6Q6P531 493 aa10.45□□□□□ -0.74
NCKAP1L-201ENST00000293373 AQRO60306 1485 aaKnown RBP eCLIP10.44□□□□□ -0.74
NCKAP1L-201ENST00000293373 NUP155O75694 1391 aa10.44□□□□□ -0.74
NCKAP1L-201ENST00000293373 PKD2Q13563 968 aa10.43□□□□□ -0.74
NCKAP1L-201ENST00000293373 TMF1P82094 1093 aa10.43□□□□□ -0.74
NCKAP1L-201ENST00000293373 GTF3C3Q9Y5Q9 886 aa10.42□□□□□ -0.74
NCKAP1L-201ENST00000293373 SENP3Q9H4L4 574 aaPredicted RBP10.42□□□□□ -0.74
NCKAP1L-201ENST00000293373 NUDCQ9Y266 331 aa10.42□□□□□ -0.74
NCKAP1L-201ENST00000293373 DCAF11Q8TEB1 546 aa10.42□□□□□ -0.74
NCKAP1L-201ENST00000293373 MYH16Q9H6N6 1097 aa10.41□□□□□ -0.74
NCKAP1L-201ENST00000293373 CUX1P39880 1505 aa10.4□□□□□ -0.74
NCKAP1L-201ENST00000293373 ERICH3Q5RHP9 1530 aa10.4□□□□□ -0.74
NCKAP1L-201ENST00000293373 BCL11AQ9H165 835 aa10.39□□□□□ -0.75
NCKAP1L-201ENST00000293373 DNMBPQ6XZF7 1577 aa10.39□□□□□ -0.75
NCKAP1L-201ENST00000293373 MAPK8IP3Q9UPT6 1336 aa10.39□□□□□ -0.75
NCKAP1L-201ENST00000293373 TOPBP1Q92547 1522 aa10.39□□□□□ -0.75
NCKAP1L-201ENST00000293373 KIF3BO15066 747 aa10.38□□□□□ -0.75
NCKAP1L-201ENST00000293373 SIN3AQ96ST3 1273 aa10.38□□□□□ -0.75
NCKAP1L-201ENST00000293373 UPF2Q9HAU5 1272 aaKnown RBP10.38□□□□□ -0.75
NCKAP1L-201ENST00000293373 BICRAQ9NZM4 1560 aa10.38□□□□□ -0.75
NCKAP1L-201ENST00000293373 NESP48681 1621 aa10.37□□□□□ -0.75
NCKAP1L-201ENST00000293373 PNNQ9H307 717 aaKnown RBP10.37□□□□□ -0.75
NCKAP1L-201ENST00000293373 WASHC2CQ9Y4E1 1318 aa10.37□□□□□ -0.75
NCKAP1L-201ENST00000293373 UACAQ9BZF9 1416 aa10.37□□□□□ -0.75
NCKAP1L-201ENST00000293373 HNRNPMP52272 730 aaKnown RBP eCLIP10.37□□□□□ -0.75
NCKAP1L-201ENST00000293373 RAB3GAP2Q9H2M9 1393 aa10.37□□□□□ -0.75
NCKAP1L-201ENST00000293373 EID1Q9Y6B2 187 aa10.37□□□□□ -0.75
NCKAP1L-201ENST00000293373 LAMC3Q9Y6N6 1575 aa10.36□□□□□ -0.75
NCKAP1L-201ENST00000293373 A0A0G2JS52 829 aa10.36□□□□□ -0.75
NCKAP1L-201ENST00000293373 ANP32AP39687 249 aaKnown RBP10.36□□□□□ -0.75
NCKAP1L-201ENST00000293373 MPHOSPH9Q99550 1183 aa10.36□□□□□ -0.75
NCKAP1L-201ENST00000293373 TOP2BQ02880 1626 aa10.36□□□□□ -0.75
NCKAP1L-201ENST00000293373 RUSC2Q8N2Y8 1516 aa10.36□□□□□ -0.75
NCKAP1L-201ENST00000293373 EFCAB5A4FU69 1503 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms