RNA–Protein interactions for RNA: ENST00000292174.4

CXCR5-201, Transcript of C-X-C motif chemokine receptor 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCR5, Length 4,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR5-201ENST00000292174 POLR3GLQ9BT43 218 aa18.58■□□□□ 0.56
CXCR5-201ENST00000292174 FMN1Q68DA7 1419 aa18.55■□□□□ 0.56
CXCR5-201ENST00000292174 FGD5Q6ZNL6 1462 aa18.53■□□□□ 0.56
CXCR5-201ENST00000292174 UNC13AQ9UPW8 1703 aa18.51■□□□□ 0.55
CXCR5-201ENST00000292174 ZNF316A6NFI3 1004 aaPredicted RBP18.48■□□□□ 0.55
CXCR5-201ENST00000292174 TONSLQ96HA7 1378 aa18.48■□□□□ 0.55
CXCR5-201ENST00000292174 PRKCSHP14314 528 aaPredicted RBP18.48■□□□□ 0.55
CXCR5-201ENST00000292174 CFDP1Q9UEE9 299 aaPredicted RBP18.47■□□□□ 0.55
CXCR5-201ENST00000292174 CHIC2Q9UKJ5 165 aa18.45■□□□□ 0.54
CXCR5-201ENST00000292174 GAPVD1Q14C86 1478 aa18.44■□□□□ 0.54
CXCR5-201ENST00000292174 ESF1Q9H501 851 aaKnown RBP18.43■□□□□ 0.54
CXCR5-201ENST00000292174 IGF1RP08069 1367 aa18.42■□□□□ 0.54
CXCR5-201ENST00000292174 ZNF326Q5BKZ1 582 aaKnown RBP18.41■□□□□ 0.54
CXCR5-201ENST00000292174 CCNB3Q8WWL7 1395 aa18.4■□□□□ 0.54
CXCR5-201ENST00000292174 KCNH8Q96L42 1107 aa18.39■□□□□ 0.54
CXCR5-201ENST00000292174 RUSC2Q8N2Y8 1516 aa18.39■□□□□ 0.53
CXCR5-201ENST00000292174 MRC2Q9UBG0 1479 aa18.37■□□□□ 0.53
CXCR5-201ENST00000292174 LAMC3Q9Y6N6 1575 aa18.36■□□□□ 0.53
CXCR5-201ENST00000292174 TOP2BQ02880 1626 aa18.36■□□□□ 0.53
CXCR5-201ENST00000292174 RTL5Q5HYW3 569 aaPredicted RBP18.34■□□□□ 0.53
CXCR5-201ENST00000292174 ANP32CO43423 234 aa18.33■□□□□ 0.53
CXCR5-201ENST00000292174 RAD54L2Q9Y4B4 1467 aa18.33■□□□□ 0.53
CXCR5-201ENST00000292174 ARHGAP35Q9NRY4 1499 aa18.33■□□□□ 0.52
CXCR5-201ENST00000292174 JPH4Q96JJ6 628 aa18.32■□□□□ 0.52
CXCR5-201ENST00000292174 SYNJ1O43426 1573 aa18.31■□□□□ 0.52
CXCR5-201ENST00000292174 ERICH3Q5RHP9 1530 aa18.3■□□□□ 0.52
CXCR5-201ENST00000292174 TOPBP1Q92547 1522 aa18.3■□□□□ 0.52
CXCR5-201ENST00000292174 RRP7BPQ9NSQ0 103 aa18.3■□□□□ 0.52
CXCR5-201ENST00000292174 NESP48681 1621 aa18.3■□□□□ 0.52
CXCR5-201ENST00000292174 IFT140Q96RY7 1462 aa18.29■□□□□ 0.52
CXCR5-201ENST00000292174 SLC4A1APQ9BWU0 796 aaKnown RBP18.29■□□□□ 0.52
CXCR5-201ENST00000292174 DNMBPQ6XZF7 1577 aa18.29■□□□□ 0.52
CXCR5-201ENST00000292174 GRIN2BQ13224 1484 aa18.29■□□□□ 0.52
CXCR5-201ENST00000292174 KIF21BO75037 1637 aa18.28■□□□□ 0.52
CXCR5-201ENST00000292174 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.26■□□□□ 0.51
CXCR5-201ENST00000292174 FHOD3Q2V2M9 1422 aa18.26■□□□□ 0.51
CXCR5-201ENST00000292174 CUX1P39880 1505 aa18.26■□□□□ 0.51
CXCR5-201ENST00000292174 POLA1P09884 1462 aaPredicted RBP18.22■□□□□ 0.51
CXCR5-201ENST00000292174 STAG3Q9UJ98 1225 aa18.21■□□□□ 0.51
CXCR5-201ENST00000292174 CCDC18Q5T9S5 1454 aa18.21■□□□□ 0.51
CXCR5-201ENST00000292174 KANK4Q5T7N3 995 aaPredicted RBP18.2■□□□□ 0.5
CXCR5-201ENST00000292174 GLIPR1L2Q4G1C9 344 aa18.18■□□□□ 0.5
CXCR5-201ENST00000292174 PRXQ9BXM0 1461 aa18.18■□□□□ 0.5
CXCR5-201ENST00000292174 CHGAP10645 457 aaKnown RBP18.17■□□□□ 0.5
CXCR5-201ENST00000292174 AQRO60306 1485 aaKnown RBP eCLIP18.17■□□□□ 0.5
CXCR5-201ENST00000292174 TIMELESSQ9UNS1 1208 aa18.16■□□□□ 0.5
CXCR5-201ENST00000292174 CNGB1Q14028 1251 aaPredicted RBP18.16■□□□□ 0.5
CXCR5-201ENST00000292174 RSPH4AQ5TD94 716 aa18.16■□□□□ 0.5
CXCR5-201ENST00000292174 BCANQ96GW7 911 aa18.15■□□□□ 0.5
CXCR5-201ENST00000292174 PTPRGP23470 1445 aa18.15■□□□□ 0.5
CXCR5-201ENST00000292174 EFCAB2Q5VUJ9 269 aa18.15■□□□□ 0.5
CXCR5-201ENST00000292174 ABCA10Q8WWZ4 1543 aa18.14■□□□□ 0.49
CXCR5-201ENST00000292174 SETD5Q9C0A6 1442 aa18.13■□□□□ 0.49
CXCR5-201ENST00000292174 OSCARQ8IYS5 282 aa18.1■□□□□ 0.49
CXCR5-201ENST00000292174 EFCAB5A4FU69 1503 aa18.07■□□□□ 0.48
CXCR5-201ENST00000292174 EIF5BO60841 1220 aaKnown RBP18.06■□□□□ 0.48
CXCR5-201ENST00000292174 EIF4G2P78344 907 aaKnown RBP eCLIP18.06■□□□□ 0.48
CXCR5-201ENST00000292174 KANK1Q14678 1352 aa18.05■□□□□ 0.48
CXCR5-201ENST00000292174 ANKRD30AQ9BXX3 1397 aa18.05■□□□□ 0.48
CXCR5-201ENST00000292174 DNAJC5BQ9UF47 199 aa18.04■□□□□ 0.48
CXCR5-201ENST00000292174 CASKIN1Q8WXD9 1431 aa18.02■□□□□ 0.47
CXCR5-201ENST00000292174 BIVM-ERCC5R4GMW8 1640 aa18■□□□□ 0.47
CXCR5-201ENST00000292174 KDM2AQ9Y2K7 1162 aa18■□□□□ 0.47
CXCR5-201ENST00000292174 CUL7Q14999 1698 aa17.96■□□□□ 0.47
CXCR5-201ENST00000292174 NEFMP07197 916 aa17.96■□□□□ 0.47
CXCR5-201ENST00000292174 FYCO1Q9BQS8 1478 aa17.96■□□□□ 0.47
CXCR5-201ENST00000292174 SNAPC4Q5SXM2 1469 aa17.95■□□□□ 0.46
CXCR5-201ENST00000292174 DDX10Q13206 875 aaKnown RBP17.94■□□□□ 0.46
CXCR5-201ENST00000292174 RAB3GAP2Q9H2M9 1393 aa17.94■□□□□ 0.46
CXCR5-201ENST00000292174 URB2Q14146 1524 aaKnown RBP17.93■□□□□ 0.46
CXCR5-201ENST00000292174 SLC24A1O60721 1099 aa17.93■□□□□ 0.46
CXCR5-201ENST00000292174 CDCA8Q53HL2 280 aa17.92■□□□□ 0.46
CXCR5-201ENST00000292174 KIAA0586Q9BVV6 1533 aa17.92■□□□□ 0.46
CXCR5-201ENST00000292174 MAGI1Q96QZ7 1491 aaPredicted RBP17.9■□□□□ 0.46
CXCR5-201ENST00000292174 ARID4BQ4LE39 1312 aaPredicted RBP17.9■□□□□ 0.46
CXCR5-201ENST00000292174 ARAP1Q96P48 1450 aa17.89■□□□□ 0.45
CXCR5-201ENST00000292174 LRRC9Q6ZRR7 1453 aa17.89■□□□□ 0.45
CXCR5-201ENST00000292174 RGL3Q3MIN7 710 aa17.88■□□□□ 0.45
CXCR5-201ENST00000292174 PPP1R15AO75807 674 aaPredicted RBP17.87■□□□□ 0.45
CXCR5-201ENST00000292174 SPAG9O60271 1321 aaKnown RBP17.87■□□□□ 0.45
CXCR5-201ENST00000292174 MYOM3Q5VTT5 1437 aa17.86■□□□□ 0.45
CXCR5-201ENST00000292174 SIN3AQ96ST3 1273 aa17.86■□□□□ 0.45
CXCR5-201ENST00000292174 PRG4Q92954 1404 aaPredicted RBP17.86■□□□□ 0.45
CXCR5-201ENST00000292174 SYNJ2O15056 1496 aa17.86■□□□□ 0.45
CXCR5-201ENST00000292174 ERICH6BQ5W0A0 696 aa17.84■□□□□ 0.45
CXCR5-201ENST00000292174 MPHOSPH9Q99550 1183 aa17.84■□□□□ 0.45
CXCR5-201ENST00000292174 NUP155O75694 1391 aa17.84■□□□□ 0.45
CXCR5-201ENST00000292174 PKD2Q13563 968 aa17.83■□□□□ 0.45
CXCR5-201ENST00000292174 FGD6Q6ZV73 1430 aa17.83■□□□□ 0.44
CXCR5-201ENST00000292174 CARD11Q9BXL7 1154 aa17.83■□□□□ 0.44
CXCR5-201ENST00000292174 HNRNPMP52272 730 aaKnown RBP eCLIP17.82■□□□□ 0.44
CXCR5-201ENST00000292174 HDGFP51858 240 aaKnown RBP17.81■□□□□ 0.44
CXCR5-201ENST00000292174 SUPT16HQ9Y5B9 1047 aaKnown RBP17.8■□□□□ 0.44
CXCR5-201ENST00000292174 IQGAP2Q13576 1575 aa17.79■□□□□ 0.44
CXCR5-201ENST00000292174 TSHZ2Q9NRE2 1034 aa17.79■□□□□ 0.44
CXCR5-201ENST00000292174 TRHP20396 242 aaPredicted RBP17.78■□□□□ 0.44
CXCR5-201ENST00000292174 PLPPR3Q6T4P5 718 aa17.78■□□□□ 0.44
CXCR5-201ENST00000292174 DAXXQ9UER7 740 aaPredicted RBP17.78■□□□□ 0.44
CXCR5-201ENST00000292174 FKBP8Q14318 412 aa17.77■□□□□ 0.44
CXCR5-201ENST00000292174 TMC1Q8TDI8 760 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms