RNA–Protein interactions for RNA: ENST00000289488.6

LRTOMT-201, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best) BASIC

Gene LRTOMT, Length 2,332 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-201ENST00000289488 SYNJ2O15056 1496 aa15.28■□□□□ 0.04
LRTOMT-201ENST00000289488 GRIN2AQ12879 1464 aa15.28■□□□□ 0.04
LRTOMT-201ENST00000289488 CLIP1P30622 1438 aa15.27■□□□□ 0.04
LRTOMT-201ENST00000289488 PPARGC1BQ86YN6 1023 aaKnown RBP15.27■□□□□ 0.03
LRTOMT-201ENST00000289488 CTTNBP2Q8WZ74 1663 aa15.27■□□□□ 0.03
LRTOMT-201ENST00000289488 CHD1O14646 1710 aa15.24■□□□□ 0.03
LRTOMT-201ENST00000289488 P3H3Q8IVL6 736 aa15.22■□□□□ 0.03
LRTOMT-201ENST00000289488 CEP170Q5SW79 1584 aa15.21■□□□□ 0.03
LRTOMT-201ENST00000289488 PELP1Q8IZL8 1130 aaKnown RBP15.21■□□□□ 0.03
LRTOMT-201ENST00000289488 ARHGAP35Q9NRY4 1499 aa15.2■□□□□ 0.02
LRTOMT-201ENST00000289488 ARAP1Q96P48 1450 aa15.18■□□□□ 0.02
LRTOMT-201ENST00000289488 IQGAP2Q13576 1575 aa15.16■□□□□ 0.02
LRTOMT-201ENST00000289488 NUP160Q12769 1436 aa15.15■□□□□ 0.02
LRTOMT-201ENST00000289488 KIAA0586Q9BVV6 1533 aa15.14■□□□□ 0.01
LRTOMT-201ENST00000289488 FHOD3Q2V2M9 1422 aa15.13■□□□□ 0.01
LRTOMT-201ENST00000289488 TTBK1Q5TCY1 1321 aaPredicted RBP15.1■□□□□ 0.01
LRTOMT-201ENST00000289488 VPS8Q8N3P4 1428 aa15.09■□□□□ 0.01
LRTOMT-201ENST00000289488 SAMD9Q5K651 1589 aa15.08■□□□□ 0.01
LRTOMT-201ENST00000289488 JPH4Q96JJ6 628 aa15.08■□□□□ 0
LRTOMT-201ENST00000289488 EFCAB5A4FU69 1503 aa15.07■□□□□ 0
LRTOMT-201ENST00000289488 UGGT2Q9NYU1 1516 aa15.06■□□□□ 0
LRTOMT-201ENST00000289488 DISP1Q96F81 1524 aa15.06■□□□□ 0
LRTOMT-201ENST00000289488 KIAA0556O60303 1618 aa15.02□□□□□ -0.01
LRTOMT-201ENST00000289488 ATP1B4Q9UN42 357 aaPredicted RBP15.01□□□□□ -0.01
LRTOMT-201ENST00000289488 CLASP1Q7Z460 1538 aa15□□□□□ -0.01
LRTOMT-201ENST00000289488 PRG4Q92954 1404 aaPredicted RBP14.99□□□□□ -0.01
LRTOMT-201ENST00000289488 PCF11O94913 1555 aaKnown RBP14.99□□□□□ -0.01
LRTOMT-201ENST00000289488 ERCC6L2Q5T890 1561 aa14.99□□□□□ -0.01
LRTOMT-201ENST00000289488 OSCARQ8IYS5 282 aa14.98□□□□□ -0.01
LRTOMT-201ENST00000289488 SHROOM2Q13796 1616 aa14.96□□□□□ -0.01
LRTOMT-201ENST00000289488 ARID3CA6NKF2 412 aa14.96□□□□□ -0.01
LRTOMT-201ENST00000289488 FMN1Q68DA7 1419 aa14.95□□□□□ -0.02
LRTOMT-201ENST00000289488 CARMIL2Q6F5E8 1435 aa14.95□□□□□ -0.02
LRTOMT-201ENST00000289488 TRIM26Q12899 539 aaPredicted RBP14.94□□□□□ -0.02
LRTOMT-201ENST00000289488 APLP2Q06481 763 aa14.93□□□□□ -0.02
LRTOMT-201ENST00000289488 KANK4Q5T7N3 995 aaPredicted RBP14.93□□□□□ -0.02
LRTOMT-201ENST00000289488 LRRIQ1Q96JM4 1722 aa14.93□□□□□ -0.02
LRTOMT-201ENST00000289488 CASKIN1Q8WXD9 1431 aa14.92□□□□□ -0.02
LRTOMT-201ENST00000289488 PLB1Q6P1J6 1458 aa14.9□□□□□ -0.02
LRTOMT-201ENST00000289488 FYCO1Q9BQS8 1478 aa14.9□□□□□ -0.02
LRTOMT-201ENST00000289488 ZEB1P37275 1124 aaPredicted RBP14.87□□□□□ -0.03
LRTOMT-201ENST00000289488 PTPRGP23470 1445 aa14.86□□□□□ -0.03
LRTOMT-201ENST00000289488 TIAM1Q13009 1591 aa14.86□□□□□ -0.03
LRTOMT-201ENST00000289488 RAPGEF6Q8TEU7 1601 aa14.85□□□□□ -0.03
LRTOMT-201ENST00000289488 CDK13Q14004 1512 aaKnown RBP14.85□□□□□ -0.03
LRTOMT-201ENST00000289488 NUP153P49790 1475 aaKnown RBP14.84□□□□□ -0.03
LRTOMT-201ENST00000289488 HECW1Q76N89 1606 aa14.82□□□□□ -0.04
LRTOMT-201ENST00000289488 CFAP43Q8NDM7 1665 aa14.82□□□□□ -0.04
LRTOMT-201ENST00000289488 EPRSP07814 1512 aaKnown RBP14.82□□□□□ -0.04
LRTOMT-201ENST00000289488 SCAF1Q9H7N4 1312 aaKnown RBP14.81□□□□□ -0.04
LRTOMT-201ENST00000289488 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.8□□□□□ -0.04
LRTOMT-201ENST00000289488 HNRNPUL2Q1KMD3 747 aaKnown RBP14.8□□□□□ -0.04
LRTOMT-201ENST00000289488 ABCA8O94911 1581 aa14.8□□□□□ -0.04
LRTOMT-201ENST00000289488 LRRC9Q6ZRR7 1453 aa14.8□□□□□ -0.04
LRTOMT-201ENST00000289488 MAGI3Q5TCQ9 1506 aa14.79□□□□□ -0.04
LRTOMT-201ENST00000289488 MAP3K1Q13233 1512 aa14.78□□□□□ -0.04
LRTOMT-201ENST00000289488 UACAQ9BZF9 1416 aa14.76□□□□□ -0.05
LRTOMT-201ENST00000289488 CCDC18Q5T9S5 1454 aa14.75□□□□□ -0.05
LRTOMT-201ENST00000289488 MTUS2Q5JR59 1369 aa14.75□□□□□ -0.05
LRTOMT-201ENST00000289488 ARHGEF11O15085 1522 aa14.75□□□□□ -0.05
LRTOMT-201ENST00000289488 ATP10BO94823 1461 aa14.73□□□□□ -0.05
LRTOMT-201ENST00000289488 ABCC2Q92887 1545 aa14.71□□□□□ -0.05
LRTOMT-201ENST00000289488 PHLDB1Q86UU1 1377 aa14.71□□□□□ -0.06
LRTOMT-201ENST00000289488 ADCY10Q96PN6 1610 aa14.7□□□□□ -0.06
LRTOMT-201ENST00000289488 RIMBP3CA6NJZ7 1639 aa14.69□□□□□ -0.06
LRTOMT-201ENST00000289488 RIMBP3BA6NNM3 1639 aa14.69□□□□□ -0.06
LRTOMT-201ENST00000289488 RIMBP3Q9UFD9 1639 aa14.69□□□□□ -0.06
LRTOMT-201ENST00000289488 CYB5RLQ6IPT4 315 aa14.68□□□□□ -0.06
LRTOMT-201ENST00000289488 EHBP1L1Q8N3D4 1523 aa14.67□□□□□ -0.06
LRTOMT-201ENST00000289488 NCOA2Q15596 1464 aa14.66□□□□□ -0.06
LRTOMT-201ENST00000289488 MYT1Q01538 1121 aa14.65□□□□□ -0.06
LRTOMT-201ENST00000289488 CDK11AQ9UQ88 783 aaPredicted RBP14.65□□□□□ -0.06
LRTOMT-201ENST00000289488 SUPT6HQ7KZ85 1726 aaKnown RBP14.65□□□□□ -0.06
LRTOMT-201ENST00000289488 ZCCHC11Q5TAX3 1644 aaKnown RBP14.65□□□□□ -0.06
LRTOMT-201ENST00000289488 KIF14Q15058 1648 aa14.65□□□□□ -0.06
LRTOMT-201ENST00000289488 UHRF1BP1LA0JNW5 1464 aa14.64□□□□□ -0.07
LRTOMT-201ENST00000289488 PLEKHD1A6NEE1 506 aa14.64□□□□□ -0.07
LRTOMT-201ENST00000289488 TROQ12816 1431 aaPredicted RBP14.63□□□□□ -0.07
LRTOMT-201ENST00000289488 KDM5BQ9UGL1 1544 aa14.63□□□□□ -0.07
LRTOMT-201ENST00000289488 KCNH8Q96L42 1107 aa14.61□□□□□ -0.07
LRTOMT-201ENST00000289488 ITGAEP38570 1179 aa14.59□□□□□ -0.07
LRTOMT-201ENST00000289488 RRBP1Q9P2E9 1410 aaKnown RBP14.59□□□□□ -0.07
LRTOMT-201ENST00000289488 CCNB3Q8WWL7 1395 aa14.59□□□□□ -0.07
LRTOMT-201ENST00000289488 FAM50AQ14320 339 aaKnown RBP14.59□□□□□ -0.07
LRTOMT-201ENST00000289488 MYOM3Q5VTT5 1437 aa14.57□□□□□ -0.08
LRTOMT-201ENST00000289488 FGD6Q6ZV73 1430 aa14.56□□□□□ -0.08
LRTOMT-201ENST00000289488 ZNF644Q9H582 1327 aaPredicted RBP14.54□□□□□ -0.08
LRTOMT-201ENST00000289488 NPM1P06748 294 aaKnown RBP eCLIP14.53□□□□□ -0.08
LRTOMT-201ENST00000289488 ASXL2Q76L83 1435 aa14.53□□□□□ -0.08
LRTOMT-201ENST00000289488 TTC37Q6PGP7 1564 aa14.53□□□□□ -0.08
LRTOMT-201ENST00000289488 ABCC10Q5T3U5 1492 aa14.52□□□□□ -0.08
LRTOMT-201ENST00000289488 CDC42BPAQ5VT25 1732 aa14.52□□□□□ -0.08
LRTOMT-201ENST00000289488 GPATCH8Q9UKJ3 1502 aaKnown RBP14.52□□□□□ -0.08
LRTOMT-201ENST00000289488 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.52□□□□□ -0.09
LRTOMT-201ENST00000289488 ZNF777Q9ULD5 760 aaPredicted RBP14.51□□□□□ -0.09
LRTOMT-201ENST00000289488 PTPN23Q9H3S7 1636 aa14.51□□□□□ -0.09
LRTOMT-201ENST00000289488 WDR7Q9Y4E6 1490 aa14.51□□□□□ -0.09
LRTOMT-201ENST00000289488 ACIN1Q9UKV3 1341 aaKnown RBP14.5□□□□□ -0.09
LRTOMT-201ENST00000289488 CFDP1Q9UEE9 299 aaPredicted RBP14.5□□□□□ -0.09
LRTOMT-201ENST00000289488 CDC42BPBQ9Y5S2 1711 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms