RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 CTTNBP2Q8WZ74 1663 aa29■■■□□ 2.23
BRAF-201ENST00000288602 MRC2Q9UBG0 1479 aa28.99■■■□□ 2.23
BRAF-201ENST00000288602 TIAM1Q13009 1591 aa28.95■■■□□ 2.23
BRAF-201ENST00000288602 AQRO60306 1485 aaKnown RBP eCLIP28.95■■■□□ 2.23
BRAF-201ENST00000288602 FHAD1B1AJZ9 1412 aa28.94■■■□□ 2.22
BRAF-201ENST00000288602 PCF11O94913 1555 aaKnown RBP28.93■■■□□ 2.22
BRAF-201ENST00000288602 RRBP1Q9P2E9 1410 aaKnown RBP28.91■■■□□ 2.22
BRAF-201ENST00000288602 EFCAB5A4FU69 1503 aa28.88■■■□□ 2.21
BRAF-201ENST00000288602 ITGAEP38570 1179 aa28.86■■■□□ 2.21
BRAF-201ENST00000288602 LRRC9Q6ZRR7 1453 aa28.86■■■□□ 2.21
BRAF-201ENST00000288602 CCNB3Q8WWL7 1395 aa28.85■■■□□ 2.21
BRAF-201ENST00000288602 MAP3K1Q13233 1512 aa28.85■■■□□ 2.21
BRAF-201ENST00000288602 PBRM1Q86U86 1689 aa28.85■■■□□ 2.21
BRAF-201ENST00000288602 ZNF608Q9ULD9 1512 aaPredicted RBP28.81■■■□□ 2.2
BRAF-201ENST00000288602 CASKIN1Q8WXD9 1431 aa28.77■■■□□ 2.2
BRAF-201ENST00000288602 WDR62O43379 1518 aa28.77■■■□□ 2.2
BRAF-201ENST00000288602 CFAP43Q8NDM7 1665 aa28.77■■■□□ 2.2
BRAF-201ENST00000288602 ERCC6Q03468 1493 aa28.77■■■□□ 2.2
BRAF-201ENST00000288602 FYCO1Q9BQS8 1478 aa28.76■■■□□ 2.19
BRAF-201ENST00000288602 PHLDB1Q86UU1 1377 aa28.76■■■□□ 2.19
BRAF-201ENST00000288602 FMN1Q68DA7 1419 aa28.73■■■□□ 2.19
BRAF-201ENST00000288602 SAMD9Q5K651 1589 aa28.73■■■□□ 2.19
BRAF-201ENST00000288602 IFT140Q96RY7 1462 aa28.72■■■□□ 2.19
BRAF-201ENST00000288602 GRIN2BQ13224 1484 aa28.71■■■□□ 2.19
BRAF-201ENST00000288602 ADAMTS12P58397 1594 aa28.7■■■□□ 2.19
BRAF-201ENST00000288602 SNAPC4Q5SXM2 1469 aa28.69■■■□□ 2.18
BRAF-201ENST00000288602 FAM50AQ14320 339 aaKnown RBP28.66■■■□□ 2.18
BRAF-201ENST00000288602 DHX57Q6P158 1386 aaKnown RBP28.65■■■□□ 2.18
BRAF-201ENST00000288602 LRRIQ1Q96JM4 1722 aa28.59■■■□□ 2.17
BRAF-201ENST00000288602 IQGAP2Q13576 1575 aa28.58■■■□□ 2.17
BRAF-201ENST00000288602 THOC2Q8NI27 1593 aaKnown RBP28.57■■■□□ 2.16
BRAF-201ENST00000288602 EIF4G3O43432 1585 aaKnown RBP28.56■■■□□ 2.16
BRAF-201ENST00000288602 MTUS2Q5JR59 1369 aa28.54■■■□□ 2.16
BRAF-201ENST00000288602 DIEXFQ68CQ4 756 aaKnown RBP28.51■■■□□ 2.15
BRAF-201ENST00000288602 RAB3GAP2Q9H2M9 1393 aa28.5■■■□□ 2.15
BRAF-201ENST00000288602 ZNF316A6NFI3 1004 aaPredicted RBP28.48■■■□□ 2.15
BRAF-201ENST00000288602 ARID3CA6NKF2 412 aa28.46■■■□□ 2.15
BRAF-201ENST00000288602 CLSPNQ9HAW4 1339 aa28.44■■■□□ 2.14
BRAF-201ENST00000288602 FBLN2P98095 1184 aa28.43■■■□□ 2.14
BRAF-201ENST00000288602 GRIN2AQ12879 1464 aa28.42■■■□□ 2.14
BRAF-201ENST00000288602 SETD5Q9C0A6 1442 aa28.41■■■□□ 2.14
BRAF-201ENST00000288602 FGD6Q6ZV73 1430 aa28.39■■■□□ 2.14
BRAF-201ENST00000288602 CHMP7Q8WUX9 453 aaPredicted RBP28.39■■■□□ 2.14
BRAF-201ENST00000288602 NCOA2Q15596 1464 aa28.38■■■□□ 2.13
BRAF-201ENST00000288602 KIAA0586Q9BVV6 1533 aa28.38■■■□□ 2.13
BRAF-201ENST00000288602 UGGT2Q9NYU1 1516 aa28.38■■■□□ 2.13
BRAF-201ENST00000288602 MAGI3Q5TCQ9 1506 aa28.37■■■□□ 2.13
BRAF-201ENST00000288602 HECW1Q76N89 1606 aa28.33■■■□□ 2.13
BRAF-201ENST00000288602 CDK13Q14004 1512 aaKnown RBP28.32■■■□□ 2.12
BRAF-201ENST00000288602 DISP1Q96F81 1524 aa28.32■■■□□ 2.12
BRAF-201ENST00000288602 MAGI1Q96QZ7 1491 aaPredicted RBP28.32■■■□□ 2.12
BRAF-201ENST00000288602 EHBP1L1Q8N3D4 1523 aa28.31■■■□□ 2.12
BRAF-201ENST00000288602 EPRSP07814 1512 aaKnown RBP28.31■■■□□ 2.12
BRAF-201ENST00000288602 CCDC18Q5T9S5 1454 aa28.31■■■□□ 2.12
BRAF-201ENST00000288602 SUPT6HQ7KZ85 1726 aaKnown RBP28.31■■■□□ 2.12
BRAF-201ENST00000288602 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.29■■■□□ 2.12
BRAF-201ENST00000288602 KIAA0556O60303 1618 aa28.29■■■□□ 2.12
BRAF-201ENST00000288602 MYOM3Q5VTT5 1437 aa28.28■■■□□ 2.12
BRAF-201ENST00000288602 SYNJ2O15056 1496 aa28.28■■■□□ 2.12
BRAF-201ENST00000288602 CEP170Q5SW79 1584 aa28.27■■■□□ 2.12
BRAF-201ENST00000288602 MAPKBP1O60336 1514 aa28.25■■■□□ 2.11
BRAF-201ENST00000288602 PTPRKQ15262 1439 aa28.24■■■□□ 2.11
BRAF-201ENST00000288602 ARHGEF11O15085 1522 aa28.19■■■□□ 2.1
BRAF-201ENST00000288602 PTPN23Q9H3S7 1636 aa28.16■■■□□ 2.1
BRAF-201ENST00000288602 SIN3AQ96ST3 1273 aa28.15■■■□□ 2.1
BRAF-201ENST00000288602 JPH4Q96JJ6 628 aa28.13■■■□□ 2.09
BRAF-201ENST00000288602 NUP153P49790 1475 aaKnown RBP28.13■■■□□ 2.09
BRAF-201ENST00000288602 NEUROD1Q13562 356 aa28.12■■■□□ 2.09
BRAF-201ENST00000288602 RAPGEF6Q8TEU7 1601 aa28.1■■■□□ 2.09
BRAF-201ENST00000288602 NUP160Q12769 1436 aa28.1■■■□□ 2.09
BRAF-201ENST00000288602 CHIC2Q9UKJ5 165 aa28.1■■■□□ 2.09
BRAF-201ENST00000288602 PLB1Q6P1J6 1458 aa28.07■■■□□ 2.08
BRAF-201ENST00000288602 HFM1A2PYH4 1435 aa28.06■■■□□ 2.08
BRAF-201ENST00000288602 RRP7BPQ9NSQ0 103 aa28.04■■■□□ 2.08
BRAF-201ENST00000288602 NAIPQ13075 1403 aa28.03■■■□□ 2.08
BRAF-201ENST00000288602 TCOF1Q13428 1488 aaKnown RBP28.01■■■□□ 2.07
BRAF-201ENST00000288602 MIER1Q8N108 512 aa28.01■■■□□ 2.07
BRAF-201ENST00000288602 CARMIL2Q6F5E8 1435 aa28.01■■■□□ 2.07
BRAF-201ENST00000288602 PRG4Q92954 1404 aaPredicted RBP27.97■■■□□ 2.07
BRAF-201ENST00000288602 CDK11AQ9UQ88 783 aaPredicted RBP27.97■■■□□ 2.07
BRAF-201ENST00000288602 MIA2Q96PC5 1412 aa27.96■■■□□ 2.07
BRAF-201ENST00000288602 ZNF644Q9H582 1327 aaPredicted RBP27.94■■■□□ 2.06
BRAF-201ENST00000288602 UACAQ9BZF9 1416 aa27.92■■■□□ 2.06
BRAF-201ENST00000288602 TROQ12816 1431 aaPredicted RBP27.86■■■□□ 2.05
BRAF-201ENST00000288602 KDM6BO15054 1643 aa27.85■■■□□ 2.05
BRAF-201ENST00000288602 CHD1O14646 1710 aa27.83■■■□□ 2.05
BRAF-201ENST00000288602 TRIM52Q96A61 297 aa27.82■■■□□ 2.04
BRAF-201ENST00000288602 YTHDC1Q96MU7 727 aaKnown RBP27.82■■■□□ 2.04
BRAF-201ENST00000288602 KIF14Q15058 1648 aa27.82■■■□□ 2.04
BRAF-201ENST00000288602 DAPK1P53355 1430 aa27.8■■■□□ 2.04
BRAF-201ENST00000288602 GCC2Q8IWJ2 1684 aa27.8■■■□□ 2.04
BRAF-201ENST00000288602 ZNF777Q9ULD5 760 aaPredicted RBP27.79■■■□□ 2.04
BRAF-201ENST00000288602 CFDP1Q9UEE9 299 aaPredicted RBP27.79■■■□□ 2.04
BRAF-201ENST00000288602 ABCA8O94911 1581 aa27.79■■■□□ 2.04
BRAF-201ENST00000288602 SCAF1Q9H7N4 1312 aaKnown RBP27.78■■■□□ 2.04
BRAF-201ENST00000288602 ABCC5O15440 1437 aa27.78■■■□□ 2.04
BRAF-201ENST00000288602 ACIN1Q9UKV3 1341 aaKnown RBP27.77■■■□□ 2.04
BRAF-201ENST00000288602 PPP1R15AO75807 674 aaPredicted RBP27.76■■■□□ 2.03
BRAF-201ENST00000288602 TIMELESSQ9UNS1 1208 aa27.76■■■□□ 2.03
BRAF-201ENST00000288602 ATP10BO94823 1461 aa27.76■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms