RNA–Protein interactions for RNA: ENST00000285124.12

PPP4R1-201, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-201ENST00000285124 EIF4G3O43432 1585 aaKnown RBP15.21■□□□□ 0.02
PPP4R1-201ENST00000285124 FHOD3Q2V2M9 1422 aa15.19■□□□□ 0.02
PPP4R1-201ENST00000285124 WDR97A6NE52 1622 aa15.19■□□□□ 0.02
PPP4R1-201ENST00000285124 TRIM26Q12899 539 aaPredicted RBP15.19■□□□□ 0.02
PPP4R1-201ENST00000285124 ARAP1Q96P48 1450 aa15.18■□□□□ 0.02
PPP4R1-201ENST00000285124 ARHGAP35Q9NRY4 1499 aa15.17■□□□□ 0.02
PPP4R1-201ENST00000285124 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.16■□□□□ 0.02
PPP4R1-201ENST00000285124 HNRNPUL2Q1KMD3 747 aaKnown RBP15.16■□□□□ 0.02
PPP4R1-201ENST00000285124 KANK4Q5T7N3 995 aaPredicted RBP15.16■□□□□ 0.02
PPP4R1-201ENST00000285124 JPH4Q96JJ6 628 aa15.15■□□□□ 0.02
PPP4R1-201ENST00000285124 VPS8Q8N3P4 1428 aa15.13■□□□□ 0.01
PPP4R1-201ENST00000285124 CUL7Q14999 1698 aa15.12■□□□□ 0.01
PPP4R1-201ENST00000285124 PBRM1Q86U86 1689 aa15.12■□□□□ 0.01
PPP4R1-201ENST00000285124 GRIN2AQ12879 1464 aa15.1■□□□□ 0.01
PPP4R1-201ENST00000285124 ADAMTS12P58397 1594 aa15.09■□□□□ 0.01
PPP4R1-201ENST00000285124 SYNJ2O15056 1496 aa15.08■□□□□ 0.01
PPP4R1-201ENST00000285124 MAGI1Q96QZ7 1491 aaPredicted RBP15.08■□□□□ 0
PPP4R1-201ENST00000285124 ITGAEP38570 1179 aa15.07■□□□□ 0
PPP4R1-201ENST00000285124 KIAA0586Q9BVV6 1533 aa15□□□□□ -0.01
PPP4R1-201ENST00000285124 IQGAP2Q13576 1575 aa14.98□□□□□ -0.01
PPP4R1-201ENST00000285124 CEP170Q5SW79 1584 aa14.97□□□□□ -0.01
PPP4R1-201ENST00000285124 OSCARQ8IYS5 282 aa14.96□□□□□ -0.02
PPP4R1-201ENST00000285124 PRG4Q92954 1404 aaPredicted RBP14.95□□□□□ -0.02
PPP4R1-201ENST00000285124 FAM50AQ14320 339 aaKnown RBP14.94□□□□□ -0.02
PPP4R1-201ENST00000285124 CTTNBP2Q8WZ74 1663 aa14.94□□□□□ -0.02
PPP4R1-201ENST00000285124 FMN1Q68DA7 1419 aa14.93□□□□□ -0.02
PPP4R1-201ENST00000285124 NUP160Q12769 1436 aa14.93□□□□□ -0.02
PPP4R1-201ENST00000285124 MTUS2Q5JR59 1369 aa14.91□□□□□ -0.02
PPP4R1-201ENST00000285124 CARMIL2Q6F5E8 1435 aa14.91□□□□□ -0.02
PPP4R1-201ENST00000285124 DISP1Q96F81 1524 aa14.89□□□□□ -0.03
PPP4R1-201ENST00000285124 PTPRGP23470 1445 aa14.88□□□□□ -0.03
PPP4R1-201ENST00000285124 EFCAB5A4FU69 1503 aa14.87□□□□□ -0.03
PPP4R1-201ENST00000285124 PLB1Q6P1J6 1458 aa14.87□□□□□ -0.03
PPP4R1-201ENST00000285124 PCF11O94913 1555 aaKnown RBP14.87□□□□□ -0.03
PPP4R1-201ENST00000285124 CHD1O14646 1710 aa14.87□□□□□ -0.03
PPP4R1-201ENST00000285124 CASKIN1Q8WXD9 1431 aa14.86□□□□□ -0.03
PPP4R1-201ENST00000285124 KCNH8Q96L42 1107 aa14.86□□□□□ -0.03
PPP4R1-201ENST00000285124 UGGT2Q9NYU1 1516 aa14.84□□□□□ -0.03
PPP4R1-201ENST00000285124 CDK13Q14004 1512 aaKnown RBP14.82□□□□□ -0.04
PPP4R1-201ENST00000285124 ZNF777Q9ULD5 760 aaPredicted RBP14.82□□□□□ -0.04
PPP4R1-201ENST00000285124 SAMD9Q5K651 1589 aa14.81□□□□□ -0.04
PPP4R1-201ENST00000285124 ERCC6L2Q5T890 1561 aa14.81□□□□□ -0.04
PPP4R1-201ENST00000285124 PHLDB1Q86UU1 1377 aa14.8□□□□□ -0.04
PPP4R1-201ENST00000285124 CCER1Q8TC90 406 aaPredicted RBP14.8□□□□□ -0.04
PPP4R1-201ENST00000285124 CDK11AQ9UQ88 783 aaPredicted RBP14.8□□□□□ -0.04
PPP4R1-201ENST00000285124 KIAA0556O60303 1618 aa14.8□□□□□ -0.04
PPP4R1-201ENST00000285124 PLEKHD1A6NEE1 506 aa14.79□□□□□ -0.04
PPP4R1-201ENST00000285124 LRRC9Q6ZRR7 1453 aa14.79□□□□□ -0.04
PPP4R1-201ENST00000285124 FYCO1Q9BQS8 1478 aa14.79□□□□□ -0.04
PPP4R1-201ENST00000285124 CYB5RLQ6IPT4 315 aa14.79□□□□□ -0.04
PPP4R1-201ENST00000285124 CHIC2Q9UKJ5 165 aa14.77□□□□□ -0.05
PPP4R1-201ENST00000285124 TIAM1Q13009 1591 aa14.76□□□□□ -0.05
PPP4R1-201ENST00000285124 EPRSP07814 1512 aaKnown RBP14.75□□□□□ -0.05
PPP4R1-201ENST00000285124 CCNB3Q8WWL7 1395 aa14.73□□□□□ -0.05
PPP4R1-201ENST00000285124 NUP153P49790 1475 aaKnown RBP14.73□□□□□ -0.05
PPP4R1-201ENST00000285124 ZNF644Q9H582 1327 aaPredicted RBP14.72□□□□□ -0.05
PPP4R1-201ENST00000285124 UACAQ9BZF9 1416 aa14.68□□□□□ -0.06
PPP4R1-201ENST00000285124 NPM1P06748 294 aaKnown RBP eCLIP14.68□□□□□ -0.06
PPP4R1-201ENST00000285124 HRCP23327 699 aa14.68□□□□□ -0.06
PPP4R1-201ENST00000285124 CFDP1Q9UEE9 299 aaPredicted RBP14.68□□□□□ -0.06
PPP4R1-201ENST00000285124 MAGI3Q5TCQ9 1506 aa14.68□□□□□ -0.06
PPP4R1-201ENST00000285124 ATP10BO94823 1461 aa14.67□□□□□ -0.06
PPP4R1-201ENST00000285124 NCOA2Q15596 1464 aa14.66□□□□□ -0.06
PPP4R1-201ENST00000285124 RRP7BPQ9NSQ0 103 aa14.66□□□□□ -0.06
PPP4R1-201ENST00000285124 HECW1Q76N89 1606 aa14.65□□□□□ -0.06
PPP4R1-201ENST00000285124 RAPGEF6Q8TEU7 1601 aa14.65□□□□□ -0.06
PPP4R1-201ENST00000285124 CLASP1Q7Z460 1538 aa14.64□□□□□ -0.07
PPP4R1-201ENST00000285124 CCDC18Q5T9S5 1454 aa14.63□□□□□ -0.07
PPP4R1-201ENST00000285124 LRRIQ1Q96JM4 1722 aa14.62□□□□□ -0.07
PPP4R1-201ENST00000285124 MAP3K1Q13233 1512 aa14.61□□□□□ -0.07
PPP4R1-201ENST00000285124 FGD6Q6ZV73 1430 aa14.59□□□□□ -0.07
PPP4R1-201ENST00000285124 RRBP1Q9P2E9 1410 aaKnown RBP14.59□□□□□ -0.07
PPP4R1-201ENST00000285124 HNRNPMP52272 730 aaKnown RBP eCLIP14.59□□□□□ -0.072e-6■■■■□ 23.5
PPP4R1-201ENST00000285124 TROQ12816 1431 aaPredicted RBP14.59□□□□□ -0.07
PPP4R1-201ENST00000285124 MYOM3Q5VTT5 1437 aa14.58□□□□□ -0.08
PPP4R1-201ENST00000285124 MYT1LQ9UL68 1186 aa14.57□□□□□ -0.08
PPP4R1-201ENST00000285124 CFAP43Q8NDM7 1665 aa14.57□□□□□ -0.08
PPP4R1-201ENST00000285124 ABCA8O94911 1581 aa14.56□□□□□ -0.08
PPP4R1-201ENST00000285124 SHROOM2Q13796 1616 aa14.55□□□□□ -0.08
PPP4R1-201ENST00000285124 EHBP1L1Q8N3D4 1523 aa14.55□□□□□ -0.08
PPP4R1-201ENST00000285124 ARHGEF11O15085 1522 aa14.55□□□□□ -0.08
PPP4R1-201ENST00000285124 TRIM52Q96A61 297 aa14.54□□□□□ -0.08
PPP4R1-201ENST00000285124 PTPRKQ15262 1439 aa14.51□□□□□ -0.09
PPP4R1-201ENST00000285124 SUPT6HQ7KZ85 1726 aaKnown RBP14.51□□□□□ -0.09
PPP4R1-201ENST00000285124 ABCC2Q92887 1545 aa14.5□□□□□ -0.09
PPP4R1-201ENST00000285124 RAB3GAP2Q9H2M9 1393 aa14.5□□□□□ -0.09
PPP4R1-201ENST00000285124 KIF14Q15058 1648 aa14.5□□□□□ -0.09
PPP4R1-201ENST00000285124 NEUROD1Q13562 356 aa14.48□□□□□ -0.09
PPP4R1-201ENST00000285124 TSPY4P0CV99 314 aa14.48□□□□□ -0.09
PPP4R1-201ENST00000285124 TSPY10P0CW01 314 aa14.48□□□□□ -0.09
PPP4R1-201ENST00000285124 GPATCH8Q9UKJ3 1502 aaKnown RBP14.48□□□□□ -0.09
PPP4R1-201ENST00000285124 SETD5Q9C0A6 1442 aa14.45□□□□□ -0.1
PPP4R1-201ENST00000285124 AFAP1Q8N556 730 aa14.44□□□□□ -0.1
PPP4R1-201ENST00000285124 ASXL2Q76L83 1435 aa14.44□□□□□ -0.1
PPP4R1-201ENST00000285124 EFCAB2Q5VUJ9 269 aa14.44□□□□□ -0.1
PPP4R1-201ENST00000285124 FOXD1Q16676 465 aa14.43□□□□□ -0.1
PPP4R1-201ENST00000285124 FAM69CQ0P6D2 419 aa14.43□□□□□ -0.1
PPP4R1-201ENST00000285124 PTPN23Q9H3S7 1636 aa14.43□□□□□ -0.1
PPP4R1-201ENST00000285124 SIN3AQ96ST3 1273 aa14.42□□□□□ -0.1
PPP4R1-201ENST00000285124 ADCY10Q96PN6 1610 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms