RNA–Protein interactions for RNA: ENST00000283415.3

LPCAT1-201, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT1, Length 3,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-201ENST00000283415 KANK4Q5T7N3 995 aaPredicted RBP20.29■□□□□ 0.84
LPCAT1-201ENST00000283415 ABCA5Q8WWZ7 1642 aa20.28■□□□□ 0.84
LPCAT1-201ENST00000283415 TOPBP1Q92547 1522 aa20.28■□□□□ 0.84
LPCAT1-201ENST00000283415 LAMC3Q9Y6N6 1575 aa20.26■□□□□ 0.83
LPCAT1-201ENST00000283415 POLA1P09884 1462 aaPredicted RBP20.24■□□□□ 0.83
LPCAT1-201ENST00000283415 ZNF316A6NFI3 1004 aaPredicted RBP20.24■□□□□ 0.83
LPCAT1-201ENST00000283415 PCF11O94913 1555 aaKnown RBP20.24■□□□□ 0.83
LPCAT1-201ENST00000283415 EFCAB5A4FU69 1503 aa20.24■□□□□ 0.83
LPCAT1-201ENST00000283415 LRRIQ1Q96JM4 1722 aa20.23■□□□□ 0.83
LPCAT1-201ENST00000283415 AQRO60306 1485 aaKnown RBP eCLIP20.23■□□□□ 0.836e-7■■■■■ 26.8
LPCAT1-201ENST00000283415 CARMIL1Q5VZK9 1371 aa20.21■□□□□ 0.83
LPCAT1-201ENST00000283415 SAMD9Q5K651 1589 aa20.21■□□□□ 0.83
LPCAT1-201ENST00000283415 LRRC9Q6ZRR7 1453 aa20.21■□□□□ 0.83
LPCAT1-201ENST00000283415 MAPKBP1O60336 1514 aa20.18■□□□□ 0.82
LPCAT1-201ENST00000283415 URB2Q14146 1524 aaKnown RBP20.16■□□□□ 0.82
LPCAT1-201ENST00000283415 CCNB3Q8WWL7 1395 aa20.15■□□□□ 0.82
LPCAT1-201ENST00000283415 FAM50AQ14320 339 aaKnown RBP20.14■□□□□ 0.81
LPCAT1-201ENST00000283415 FYCO1Q9BQS8 1478 aa20.14■□□□□ 0.81
LPCAT1-201ENST00000283415 NESP48681 1621 aa20.12■□□□□ 0.81
LPCAT1-201ENST00000283415 RAD54L2Q9Y4B4 1467 aa20.12■□□□□ 0.81
LPCAT1-201ENST00000283415 SNAPC4Q5SXM2 1469 aa20.12■□□□□ 0.81
LPCAT1-201ENST00000283415 KIF21AQ7Z4S6 1674 aa20.12■□□□□ 0.81
LPCAT1-201ENST00000283415 CNGB1Q14028 1251 aaPredicted RBP20.11■□□□□ 0.81
LPCAT1-201ENST00000283415 TARBP1Q13395 1621 aaKnown RBP20.11■□□□□ 0.81
LPCAT1-201ENST00000283415 ARID3CA6NKF2 412 aa20.09■□□□□ 0.81
LPCAT1-201ENST00000283415 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.09■□□□□ 0.811e-6■■■□□ 18.3
LPCAT1-201ENST00000283415 FHAD1B1AJZ9 1412 aa20.08■□□□□ 0.8
LPCAT1-201ENST00000283415 CASKIN1Q8WXD9 1431 aa20.07■□□□□ 0.8
LPCAT1-201ENST00000283415 THOC2Q8NI27 1593 aaKnown RBP20.05■□□□□ 0.8
LPCAT1-201ENST00000283415 PHLDB1Q86UU1 1377 aa20.04■□□□□ 0.8
LPCAT1-201ENST00000283415 ARHGEF11O15085 1522 aa20■□□□□ 0.79
LPCAT1-201ENST00000283415 PBRM1Q86U86 1689 aa19.99■□□□□ 0.79
LPCAT1-201ENST00000283415 GRIN2BQ13224 1484 aa19.97■□□□□ 0.79
LPCAT1-201ENST00000283415 BCANQ96GW7 911 aa19.96■□□□□ 0.79
LPCAT1-201ENST00000283415 MIER1Q8N108 512 aa19.95■□□□□ 0.78
LPCAT1-201ENST00000283415 RAB3GAP2Q9H2M9 1393 aa19.94■□□□□ 0.78
LPCAT1-201ENST00000283415 FHOD3Q2V2M9 1422 aa19.91■□□□□ 0.78
LPCAT1-201ENST00000283415 SETD5Q9C0A6 1442 aa19.9■□□□□ 0.78
LPCAT1-201ENST00000283415 HIRIP3Q9BW71 556 aaPredicted RBP19.88■□□□□ 0.77
LPCAT1-201ENST00000283415 GAPVD1Q14C86 1478 aa19.86■□□□□ 0.77
LPCAT1-201ENST00000283415 FMN1Q68DA7 1419 aa19.86■□□□□ 0.77
LPCAT1-201ENST00000283415 ADAMTS12P58397 1594 aa19.85■□□□□ 0.77
LPCAT1-201ENST00000283415 POLR3GLQ9BT43 218 aa19.84■□□□□ 0.77
LPCAT1-201ENST00000283415 MAGI3Q5TCQ9 1506 aa19.83■□□□□ 0.77
LPCAT1-201ENST00000283415 UGGT2Q9NYU1 1516 aa19.83■□□□□ 0.76
LPCAT1-201ENST00000283415 SUPT6HQ7KZ85 1726 aaKnown RBP19.82■□□□□ 0.76
LPCAT1-201ENST00000283415 PDS5BQ9NTI5 1447 aa19.82■□□□□ 0.76
LPCAT1-201ENST00000283415 PTPN23Q9H3S7 1636 aa19.81■□□□□ 0.76
LPCAT1-201ENST00000283415 GCC2Q8IWJ2 1684 aa19.81■□□□□ 0.76
LPCAT1-201ENST00000283415 KDM5BQ9UGL1 1544 aa19.81■□□□□ 0.76
LPCAT1-201ENST00000283415 FGD6Q6ZV73 1430 aa19.8■□□□□ 0.76
LPCAT1-201ENST00000283415 EHBP1L1Q8N3D4 1523 aa19.8■□□□□ 0.76
LPCAT1-201ENST00000283415 TCOF1Q13428 1488 aaKnown RBP19.79■□□□□ 0.76
LPCAT1-201ENST00000283415 PTPRKQ15262 1439 aa19.77■□□□□ 0.76
LPCAT1-201ENST00000283415 HFM1A2PYH4 1435 aa19.75■□□□□ 0.75
LPCAT1-201ENST00000283415 IQGAP2Q13576 1575 aa19.72■□□□□ 0.75
LPCAT1-201ENST00000283415 HECW1Q76N89 1606 aa19.72■□□□□ 0.75
LPCAT1-201ENST00000283415 WDR62O43379 1518 aa19.71■□□□□ 0.75
LPCAT1-201ENST00000283415 NCOA2Q15596 1464 aa19.71■□□□□ 0.75
LPCAT1-201ENST00000283415 CCDC18Q5T9S5 1454 aa19.71■□□□□ 0.74
LPCAT1-201ENST00000283415 TRIM52Q96A61 297 aa19.7■□□□□ 0.74
LPCAT1-201ENST00000283415 DENND4BO75064 1496 aaPredicted RBP19.69■□□□□ 0.74
LPCAT1-201ENST00000283415 TIMELESSQ9UNS1 1208 aa19.69■□□□□ 0.74
LPCAT1-201ENST00000283415 MYOM3Q5VTT5 1437 aa19.69■□□□□ 0.74
LPCAT1-201ENST00000283415 NEFLP07196 543 aa19.68■□□□□ 0.74
LPCAT1-201ENST00000283415 TDRD9Q8NDG6 1382 aaKnown RBP19.68■□□□□ 0.74
LPCAT1-201ENST00000283415 FBLN2P98095 1184 aa19.67■□□□□ 0.74
LPCAT1-201ENST00000283415 AKNAQ7Z591 1439 aa19.67■□□□□ 0.74
LPCAT1-201ENST00000283415 DNAJC5BQ9UF47 199 aa19.67■□□□□ 0.74
LPCAT1-201ENST00000283415 MRC2Q9UBG0 1479 aa19.66■□□□□ 0.74
LPCAT1-201ENST00000283415 NAIPQ13075 1403 aa19.65■□□□□ 0.74
LPCAT1-201ENST00000283415 DDX10Q13206 875 aaKnown RBP19.64■□□□□ 0.74
LPCAT1-201ENST00000283415 UACAQ9BZF9 1416 aa19.63■□□□□ 0.73
LPCAT1-201ENST00000283415 CHIC2Q9UKJ5 165 aa19.63■□□□□ 0.73
LPCAT1-201ENST00000283415 EPRSP07814 1512 aaKnown RBP19.6■□□□□ 0.73
LPCAT1-201ENST00000283415 KDM6BO15054 1643 aa19.6■□□□□ 0.73
LPCAT1-201ENST00000283415 KIAA0556O60303 1618 aa19.6■□□□□ 0.73
LPCAT1-201ENST00000283415 DISP1Q96F81 1524 aa19.58■□□□□ 0.72
LPCAT1-201ENST00000283415 SIN3AQ96ST3 1273 aa19.57■□□□□ 0.72
LPCAT1-201ENST00000283415 ZNF326Q5BKZ1 582 aaKnown RBP19.56■□□□□ 0.72
LPCAT1-201ENST00000283415 ADCY10Q96PN6 1610 aa19.55■□□□□ 0.72
LPCAT1-201ENST00000283415 IFT140Q96RY7 1462 aa19.55■□□□□ 0.72
LPCAT1-201ENST00000283415 MIA2Q96PC5 1412 aa19.54■□□□□ 0.72
LPCAT1-201ENST00000283415 EIF4G3O43432 1585 aaKnown RBP19.53■□□□□ 0.72
LPCAT1-201ENST00000283415 ERICH6Q7L0X2 663 aa19.52■□□□□ 0.72
LPCAT1-201ENST00000283415 MYT1Q01538 1121 aa19.52■□□□□ 0.72
LPCAT1-201ENST00000283415 PPP1R15AO75807 674 aaPredicted RBP19.52■□□□□ 0.72
LPCAT1-201ENST00000283415 DNMT1P26358 1616 aaKnown RBP19.52■□□□□ 0.71
LPCAT1-201ENST00000283415 RAPGEF6Q8TEU7 1601 aa19.48■□□□□ 0.71
LPCAT1-201ENST00000283415 MTUS2Q5JR59 1369 aa19.48■□□□□ 0.71
LPCAT1-201ENST00000283415 CROCC2H7BZ55 1655 aa19.48■□□□□ 0.71
LPCAT1-201ENST00000283415 KIAA0586Q9BVV6 1533 aa19.48■□□□□ 0.71
LPCAT1-201ENST00000283415 ZNF608Q9ULD9 1512 aaPredicted RBP19.48■□□□□ 0.71
LPCAT1-201ENST00000283415 CDK13Q14004 1512 aaKnown RBP19.47■□□□□ 0.71
LPCAT1-201ENST00000283415 POLR1AO95602 1720 aaPredicted RBP19.47■□□□□ 0.71
LPCAT1-201ENST00000283415 SENP3-EIF4A1A0A087X0R7 540 aa19.47■□□□□ 0.71
LPCAT1-201ENST00000283415 ZNF777Q9ULD5 760 aaPredicted RBP19.45■□□□□ 0.7
LPCAT1-201ENST00000283415 NUP153P49790 1475 aaKnown RBP19.44■□□□□ 0.7
LPCAT1-201ENST00000283415 FKBP8Q14318 412 aa19.43■□□□□ 0.7
LPCAT1-201ENST00000283415 CEP170Q5SW79 1584 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms