RNA–Protein interactions for RNA: ENST00000282268.7

XRCC4-201, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRCC4, Length 1,696 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-201ENST00000282268 GRIN2AQ12879 1464 aa18.06■□□□□ 0.48
XRCC4-201ENST00000282268 P3H3Q8IVL6 736 aa18.03■□□□□ 0.48
XRCC4-201ENST00000282268 CTTNBP2Q8WZ74 1663 aa18.03■□□□□ 0.48
XRCC4-201ENST00000282268 ARHGAP35Q9NRY4 1499 aa17.96■□□□□ 0.47
XRCC4-201ENST00000282268 CEP170Q5SW79 1584 aa17.96■□□□□ 0.47
XRCC4-201ENST00000282268 CHD1O14646 1710 aa17.95■□□□□ 0.46
XRCC4-201ENST00000282268 AEBP2Q6ZN18 517 aaPredicted RBP17.95■□□□□ 0.46
XRCC4-201ENST00000282268 IQGAP2Q13576 1575 aa17.94■□□□□ 0.46
XRCC4-201ENST00000282268 ARAP1Q96P48 1450 aa17.94■□□□□ 0.46
XRCC4-201ENST00000282268 KIAA0586Q9BVV6 1533 aa17.92■□□□□ 0.46
XRCC4-201ENST00000282268 PPARGC1BQ86YN6 1023 aaKnown RBP17.91■□□□□ 0.46
XRCC4-201ENST00000282268 NUP160Q12769 1436 aa17.91■□□□□ 0.46
XRCC4-201ENST00000282268 FHOD3Q2V2M9 1422 aa17.9■□□□□ 0.46
XRCC4-201ENST00000282268 TTBK1Q5TCY1 1321 aaPredicted RBP17.89■□□□□ 0.46
XRCC4-201ENST00000282268 VPS8Q8N3P4 1428 aa17.88■□□□□ 0.45
XRCC4-201ENST00000282268 EFCAB5A4FU69 1503 aa17.85■□□□□ 0.45
XRCC4-201ENST00000282268 JPH4Q96JJ6 628 aa17.85■□□□□ 0.45
XRCC4-201ENST00000282268 ATP1B4Q9UN42 357 aaPredicted RBP17.84■□□□□ 0.45
XRCC4-201ENST00000282268 SAMD9Q5K651 1589 aa17.82■□□□□ 0.44
XRCC4-201ENST00000282268 UGGT2Q9NYU1 1516 aa17.81■□□□□ 0.44
XRCC4-201ENST00000282268 APLP2Q06481 763 aa17.8■□□□□ 0.44
XRCC4-201ENST00000282268 DISP1Q96F81 1524 aa17.77■□□□□ 0.44
XRCC4-201ENST00000282268 KIAA0556O60303 1618 aa17.75■□□□□ 0.43
XRCC4-201ENST00000282268 PRG4Q92954 1404 aaPredicted RBP17.75■□□□□ 0.43
XRCC4-201ENST00000282268 CARMIL2Q6F5E8 1435 aa17.74■□□□□ 0.43
XRCC4-201ENST00000282268 OSCARQ8IYS5 282 aa17.74■□□□□ 0.43
XRCC4-201ENST00000282268 FMN1Q68DA7 1419 aa17.73■□□□□ 0.43
XRCC4-201ENST00000282268 CLASP1Q7Z460 1538 aa17.72■□□□□ 0.43
XRCC4-201ENST00000282268 PCF11O94913 1555 aaKnown RBP17.72■□□□□ 0.43
XRCC4-201ENST00000282268 ARID3CA6NKF2 412 aa17.69■□□□□ 0.42
XRCC4-201ENST00000282268 CASKIN1Q8WXD9 1431 aa17.67■□□□□ 0.42
XRCC4-201ENST00000282268 ERCC6L2Q5T890 1561 aa17.66■□□□□ 0.42
XRCC4-201ENST00000282268 SHROOM2Q13796 1616 aa17.65■□□□□ 0.42
XRCC4-201ENST00000282268 FYCO1Q9BQS8 1478 aa17.65■□□□□ 0.42
XRCC4-201ENST00000282268 KANK4Q5T7N3 995 aaPredicted RBP17.64■□□□□ 0.42
XRCC4-201ENST00000282268 PTPRGP23470 1445 aa17.61■□□□□ 0.41
XRCC4-201ENST00000282268 PLB1Q6P1J6 1458 aa17.59■□□□□ 0.41
XRCC4-201ENST00000282268 PCGF6Q9BYE7 350 aa17.59■□□□□ 0.41
XRCC4-201ENST00000282268 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.58■□□□□ 0.41
XRCC4-201ENST00000282268 HNRNPUL2Q1KMD3 747 aaKnown RBP17.58■□□□□ 0.41
XRCC4-201ENST00000282268 TIAM1Q13009 1591 aa17.58■□□□□ 0.4
XRCC4-201ENST00000282268 HECW1Q76N89 1606 aa17.57■□□□□ 0.4
XRCC4-201ENST00000282268 TRIM26Q12899 539 aaPredicted RBP17.57■□□□□ 0.4
XRCC4-201ENST00000282268 RAPGEF6Q8TEU7 1601 aa17.57■□□□□ 0.4
XRCC4-201ENST00000282268 LRRIQ1Q96JM4 1722 aa17.54■□□□□ 0.4
XRCC4-201ENST00000282268 CDK13Q14004 1512 aaKnown RBP17.54■□□□□ 0.4
XRCC4-201ENST00000282268 CFAP43Q8NDM7 1665 aa17.53■□□□□ 0.4
XRCC4-201ENST00000282268 NUP153P49790 1475 aaKnown RBP17.52■□□□□ 0.4
XRCC4-201ENST00000282268 EPRSP07814 1512 aaKnown RBP17.52■□□□□ 0.4
XRCC4-201ENST00000282268 MAP3K1Q13233 1512 aa17.52■□□□□ 0.4
XRCC4-201ENST00000282268 LRRC9Q6ZRR7 1453 aa17.52■□□□□ 0.39
XRCC4-201ENST00000282268 CCDC18Q5T9S5 1454 aa17.5■□□□□ 0.39
XRCC4-201ENST00000282268 ABCA8O94911 1581 aa17.5■□□□□ 0.39
XRCC4-201ENST00000282268 MTUS2Q5JR59 1369 aa17.5■□□□□ 0.39
XRCC4-201ENST00000282268 UACAQ9BZF9 1416 aa17.48■□□□□ 0.39
XRCC4-201ENST00000282268 MAGI3Q5TCQ9 1506 aa17.43■□□□□ 0.38
XRCC4-201ENST00000282268 CDK11AQ9UQ88 783 aaPredicted RBP17.42■□□□□ 0.38
XRCC4-201ENST00000282268 ATP10BO94823 1461 aa17.42■□□□□ 0.38
XRCC4-201ENST00000282268 ABCC2Q92887 1545 aa17.41■□□□□ 0.38
XRCC4-201ENST00000282268 ARHGEF11O15085 1522 aa17.4■□□□□ 0.38
XRCC4-201ENST00000282268 EHBP1L1Q8N3D4 1523 aa17.39■□□□□ 0.37
XRCC4-201ENST00000282268 PHLDB1Q86UU1 1377 aa17.38■□□□□ 0.37
XRCC4-201ENST00000282268 PLEKHD1A6NEE1 506 aa17.38■□□□□ 0.37
XRCC4-201ENST00000282268 NCOA2Q15596 1464 aa17.35■□□□□ 0.37
XRCC4-201ENST00000282268 CYB5RLQ6IPT4 315 aa17.35■□□□□ 0.37
XRCC4-201ENST00000282268 UHRF1BP1LA0JNW5 1464 aa17.34■□□□□ 0.37
XRCC4-201ENST00000282268 SUPT6HQ7KZ85 1726 aaKnown RBP17.34■□□□□ 0.37
XRCC4-201ENST00000282268 RIMBP3CA6NJZ7 1639 aa17.34■□□□□ 0.37
XRCC4-201ENST00000282268 RIMBP3BA6NNM3 1639 aa17.34■□□□□ 0.37
XRCC4-201ENST00000282268 ADCY10Q96PN6 1610 aa17.34■□□□□ 0.37
XRCC4-201ENST00000282268 RIMBP3Q9UFD9 1639 aa17.34■□□□□ 0.37
XRCC4-201ENST00000282268 TROQ12816 1431 aaPredicted RBP17.33■□□□□ 0.37
XRCC4-201ENST00000282268 FAM50AQ14320 339 aaKnown RBP17.32■□□□□ 0.36
XRCC4-201ENST00000282268 ITGAEP38570 1179 aa17.31■□□□□ 0.36
XRCC4-201ENST00000282268 KCNH8Q96L42 1107 aa17.31■□□□□ 0.36
XRCC4-201ENST00000282268 ZCCHC11Q5TAX3 1644 aaKnown RBP17.31■□□□□ 0.36
XRCC4-201ENST00000282268 NPM1P06748 294 aaKnown RBP eCLIP17.29■□□□□ 0.36
XRCC4-201ENST00000282268 CCNB3Q8WWL7 1395 aa17.29■□□□□ 0.36
XRCC4-201ENST00000282268 KDM5BQ9UGL1 1544 aa17.28■□□□□ 0.36
XRCC4-201ENST00000282268 KIF14Q15058 1648 aa17.27■□□□□ 0.36
XRCC4-201ENST00000282268 RRBP1Q9P2E9 1410 aaKnown RBP17.27■□□□□ 0.36
XRCC4-201ENST00000282268 MYOM3Q5VTT5 1437 aa17.26■□□□□ 0.35
XRCC4-201ENST00000282268 FGD6Q6ZV73 1430 aa17.24■□□□□ 0.35
XRCC4-201ENST00000282268 ZNF777Q9ULD5 760 aaPredicted RBP17.21■□□□□ 0.35
XRCC4-201ENST00000282268 ASXL2Q76L83 1435 aa17.19■□□□□ 0.34
XRCC4-201ENST00000282268 CFDP1Q9UEE9 299 aaPredicted RBP17.19■□□□□ 0.34
XRCC4-201ENST00000282268 ABCC10Q5T3U5 1492 aa17.17■□□□□ 0.34
XRCC4-201ENST00000282268 PTPN23Q9H3S7 1636 aa17.17■□□□□ 0.34
XRCC4-201ENST00000282268 GPATCH8Q9UKJ3 1502 aaKnown RBP17.17■□□□□ 0.34
XRCC4-201ENST00000282268 ZNF644Q9H582 1327 aaPredicted RBP17.17■□□□□ 0.34
XRCC4-201ENST00000282268 WDR7Q9Y4E6 1490 aa17.17■□□□□ 0.34
XRCC4-201ENST00000282268 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.14■□□□□ 0.34
XRCC4-201ENST00000282268 MIA2Q96PC5 1412 aa17.14■□□□□ 0.33
XRCC4-201ENST00000282268 TTC37Q6PGP7 1564 aa17.14■□□□□ 0.33
XRCC4-201ENST00000282268 ITSN2Q9NZM3 1697 aa17.12■□□□□ 0.33
XRCC4-201ENST00000282268 CDC42BPAQ5VT25 1732 aa17.11■□□□□ 0.33
XRCC4-201ENST00000282268 TCOF1Q13428 1488 aaKnown RBP17.1■□□□□ 0.33
XRCC4-201ENST00000282268 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.1■□□□□ 0.33
XRCC4-201ENST00000282268 CHIC2Q9UKJ5 165 aa17.09■□□□□ 0.33
XRCC4-201ENST00000282268 CAMSAP2Q08AD1 1489 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms