RNA–Protein interactions for RNA: ENST00000281821.6

EPHA4-201, Transcript of EPH receptor A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA4, Length 6,346 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-201ENST00000281821 ESF1Q9H501 851 aaKnown RBP11.41□□□□□ -0.58
EPHA4-201ENST00000281821 PTPRGP23470 1445 aa11.41□□□□□ -0.58
EPHA4-201ENST00000281821 FAM50AQ14320 339 aaKnown RBP11.41□□□□□ -0.58
EPHA4-201ENST00000281821 AQRO60306 1485 aaKnown RBP eCLIP11.4□□□□□ -0.58
EPHA4-201ENST00000281821 URB2Q14146 1524 aaKnown RBP11.4□□□□□ -0.58
EPHA4-201ENST00000281821 SYNJ2O15056 1496 aa11.4□□□□□ -0.59
EPHA4-201ENST00000281821 WDR62O43379 1518 aa11.38□□□□□ -0.59
EPHA4-201ENST00000281821 KIAA0586Q9BVV6 1533 aa11.37□□□□□ -0.59
EPHA4-201ENST00000281821 RSPH4AQ5TD94 716 aa11.37□□□□□ -0.59
EPHA4-201ENST00000281821 VPS8Q8N3P4 1428 aa11.36□□□□□ -0.59
EPHA4-201ENST00000281821 SYNJ1O43426 1573 aa11.35□□□□□ -0.59
EPHA4-201ENST00000281821 CCER1Q8TC90 406 aaPredicted RBP11.35□□□□□ -0.59
EPHA4-201ENST00000281821 PRXQ9BXM0 1461 aa11.34□□□□□ -0.59
EPHA4-201ENST00000281821 PCGF6Q9BYE7 350 aa11.33□□□□□ -0.59
EPHA4-201ENST00000281821 CUL7Q14999 1698 aa11.33□□□□□ -0.6
EPHA4-201ENST00000281821 BIVM-ERCC5R4GMW8 1640 aa11.33□□□□□ -0.6
EPHA4-201ENST00000281821 EFCAB5A4FU69 1503 aa11.33□□□□□ -0.6
EPHA4-201ENST00000281821 SNAPC4Q5SXM2 1469 aa11.33□□□□□ -0.6
EPHA4-201ENST00000281821 CFDP1Q9UEE9 299 aaPredicted RBP11.32□□□□□ -0.6
EPHA4-201ENST00000281821 CCNB3Q8WWL7 1395 aa11.32□□□□□ -0.6
EPHA4-201ENST00000281821 EFCAB2Q5VUJ9 269 aa11.32□□□□□ -0.6
EPHA4-201ENST00000281821 ZNF777Q9ULD5 760 aaPredicted RBP11.31□□□□□ -0.6
EPHA4-201ENST00000281821 KIF21BO75037 1637 aa11.31□□□□□ -0.6
EPHA4-201ENST00000281821 ITGAEP38570 1179 aa11.3□□□□□ -0.6
EPHA4-201ENST00000281821 CCDC18Q5T9S5 1454 aa11.3□□□□□ -0.6
EPHA4-201ENST00000281821 GRIN2AQ12879 1464 aa11.28□□□□□ -0.6
EPHA4-201ENST00000281821 ARID3CA6NKF2 412 aa11.27□□□□□ -0.61
EPHA4-201ENST00000281821 KCNH8Q96L42 1107 aa11.27□□□□□ -0.61
EPHA4-201ENST00000281821 TRIM52Q96A61 297 aa11.26□□□□□ -0.61
EPHA4-201ENST00000281821 PRG4Q92954 1404 aaPredicted RBP11.25□□□□□ -0.61
EPHA4-201ENST00000281821 PRDM2Q13029 1718 aa11.23□□□□□ -0.61
EPHA4-201ENST00000281821 TRHP20396 242 aaPredicted RBP11.21□□□□□ -0.62
EPHA4-201ENST00000281821 FHOD3Q2V2M9 1422 aa11.19□□□□□ -0.62
EPHA4-201ENST00000281821 ARHGAP35Q9NRY4 1499 aa11.19□□□□□ -0.62
EPHA4-201ENST00000281821 CYB5RLQ6IPT4 315 aa11.19□□□□□ -0.62
EPHA4-201ENST00000281821 CASKIN1Q8WXD9 1431 aa11.18□□□□□ -0.62
EPHA4-201ENST00000281821 IQGAP2Q13576 1575 aa11.18□□□□□ -0.62
EPHA4-201ENST00000281821 PPARGC1BQ86YN6 1023 aaKnown RBP11.17□□□□□ -0.62
EPHA4-201ENST00000281821 ZNF608Q9ULD9 1512 aaPredicted RBP11.17□□□□□ -0.62
EPHA4-201ENST00000281821 UACAQ9BZF9 1416 aa11.17□□□□□ -0.62
EPHA4-201ENST00000281821 RUSC2Q8N2Y8 1516 aa11.16□□□□□ -0.62
EPHA4-201ENST00000281821 KANK1Q14678 1352 aa11.16□□□□□ -0.62
EPHA4-201ENST00000281821 FYCO1Q9BQS8 1478 aa11.14□□□□□ -0.63
EPHA4-201ENST00000281821 PLEKHH2Q8IVE3 1493 aa11.14□□□□□ -0.63
EPHA4-201ENST00000281821 NUP160Q12769 1436 aa11.13□□□□□ -0.63
EPHA4-201ENST00000281821 KIF21AQ7Z4S6 1674 aa11.12□□□□□ -0.63
EPHA4-201ENST00000281821 ANKRD30AQ9BXX3 1397 aa11.11□□□□□ -0.63
EPHA4-201ENST00000281821 HDGFP51858 240 aaKnown RBP11.11□□□□□ -0.63
EPHA4-201ENST00000281821 PHLDB1Q86UU1 1377 aa11.11□□□□□ -0.63
EPHA4-201ENST00000281821 ADAMTS12P58397 1594 aa11.1□□□□□ -0.63
EPHA4-201ENST00000281821 STAG3Q9UJ98 1225 aa11.1□□□□□ -0.63
EPHA4-201ENST00000281821 CLSPNQ9HAW4 1339 aa11.09□□□□□ -0.63
EPHA4-201ENST00000281821 PLB1Q6P1J6 1458 aa11.08□□□□□ -0.64
EPHA4-201ENST00000281821 EIF4G3O43432 1585 aaKnown RBP11.08□□□□□ -0.64
EPHA4-201ENST00000281821 THOC2Q8NI27 1593 aaKnown RBP11.08□□□□□ -0.64
EPHA4-201ENST00000281821 TROQ12816 1431 aaPredicted RBP11.07□□□□□ -0.64
EPHA4-201ENST00000281821 SLC24A1O60721 1099 aa11.07□□□□□ -0.64
EPHA4-201ENST00000281821 ARID4BQ4LE39 1312 aaPredicted RBP11.07□□□□□ -0.64
EPHA4-201ENST00000281821 SPAG9O60271 1321 aaKnown RBP11.06□□□□□ -0.64
EPHA4-201ENST00000281821 HECW1Q76N89 1606 aa11.06□□□□□ -0.64
EPHA4-201ENST00000281821 MYOM3Q5VTT5 1437 aa11.05□□□□□ -0.64
EPHA4-201ENST00000281821 UGGT2Q9NYU1 1516 aa11.05□□□□□ -0.64
EPHA4-201ENST00000281821 ABCA5Q8WWZ7 1642 aa11.05□□□□□ -0.64
EPHA4-201ENST00000281821 MAP3K1Q13233 1512 aa11.05□□□□□ -0.64
EPHA4-201ENST00000281821 HRCP23327 699 aa11.05□□□□□ -0.64
EPHA4-201ENST00000281821 FAM69CQ0P6D2 419 aa11.04□□□□□ -0.64
EPHA4-201ENST00000281821 TIMELESSQ9UNS1 1208 aa11.04□□□□□ -0.64
EPHA4-201ENST00000281821 MIA2Q96PC5 1412 aa11.04□□□□□ -0.64
EPHA4-201ENST00000281821 TARBP1Q13395 1621 aaKnown RBP11.03□□□□□ -0.64
EPHA4-201ENST00000281821 EHBP1L1Q8N3D4 1523 aa11.01□□□□□ -0.65
EPHA4-201ENST00000281821 CHIC2Q9UKJ5 165 aa11.01□□□□□ -0.65
EPHA4-201ENST00000281821 SLC4A1APQ9BWU0 796 aaKnown RBP11□□□□□ -0.65
EPHA4-201ENST00000281821 TONSLQ96HA7 1378 aa11□□□□□ -0.65
EPHA4-201ENST00000281821 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.98□□□□□ -0.65
EPHA4-201ENST00000281821 TEX14Q8IWB6 1497 aa10.98□□□□□ -0.65
EPHA4-201ENST00000281821 BCANQ96GW7 911 aa10.97□□□□□ -0.65
EPHA4-201ENST00000281821 STAC3Q96MF2 364 aa10.97□□□□□ -0.65
EPHA4-201ENST00000281821 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.97□□□□□ -0.65
EPHA4-201ENST00000281821 POGZQ7Z3K3 1410 aa10.97□□□□□ -0.65
EPHA4-201ENST00000281821 ARAP1Q96P48 1450 aa10.96□□□□□ -0.66
EPHA4-201ENST00000281821 LRRC9Q6ZRR7 1453 aa10.96□□□□□ -0.66
EPHA4-201ENST00000281821 EPRSP07814 1512 aaKnown RBP10.95□□□□□ -0.66
EPHA4-201ENST00000281821 RRP7BPQ9NSQ0 103 aa10.94□□□□□ -0.66
EPHA4-201ENST00000281821 PPP1R15AO75807 674 aaPredicted RBP10.94□□□□□ -0.66
EPHA4-201ENST00000281821 PPP6R1Q9UPN7 881 aa10.93□□□□□ -0.66
EPHA4-201ENST00000281821 SETD5Q9C0A6 1442 aa10.93□□□□□ -0.66
EPHA4-201ENST00000281821 CHGAP10645 457 aaKnown RBP10.92□□□□□ -0.66
EPHA4-201ENST00000281821 FGD6Q6ZV73 1430 aa10.92□□□□□ -0.66
EPHA4-201ENST00000281821 KANK4Q5T7N3 995 aaPredicted RBP10.92□□□□□ -0.66
EPHA4-201ENST00000281821 NCOA2Q15596 1464 aa10.91□□□□□ -0.66
EPHA4-201ENST00000281821 UHRF1BP1LA0JNW5 1464 aa10.91□□□□□ -0.66
EPHA4-201ENST00000281821 ABCC2Q92887 1545 aa10.91□□□□□ -0.66
EPHA4-201ENST00000281821 CD109Q6YHK3 1445 aa10.91□□□□□ -0.66
EPHA4-201ENST00000281821 CDCA8Q53HL2 280 aa10.9□□□□□ -0.66
EPHA4-201ENST00000281821 PELP1Q8IZL8 1130 aaKnown RBP10.9□□□□□ -0.66
EPHA4-201ENST00000281821 PBRM1Q86U86 1689 aa10.89□□□□□ -0.67
EPHA4-201ENST00000281821 KIAA0556O60303 1618 aa10.89□□□□□ -0.67
EPHA4-201ENST00000281821 ARHGAP5Q13017 1502 aa10.88□□□□□ -0.67
EPHA4-201ENST00000281821 KIF3BO15066 747 aa10.88□□□□□ -0.67
EPHA4-201ENST00000281821 NEUROD1Q13562 356 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms