RNA–Protein interactions for RNA: ENST00000274150.4

NKD2-201, Transcript of naked cuticle homolog 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKD2, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKD2-201ENST00000274150 CLIP1P30622 1438 aa30.31■■■□□ 2.44
NKD2-201ENST00000274150 CTTNBP2Q8WZ74 1663 aa30.27■■■□□ 2.44
NKD2-201ENST00000274150 CHD1O14646 1710 aa30.2■■■□□ 2.42
NKD2-201ENST00000274150 P3H3Q8IVL6 736 aa30.18■■■□□ 2.42
NKD2-201ENST00000274150 CEP170Q5SW79 1584 aa30.17■■■□□ 2.42
NKD2-201ENST00000274150 ARHGAP35Q9NRY4 1499 aa30.13■■■□□ 2.41
NKD2-201ENST00000274150 IQGAP2Q13576 1575 aa30.11■■■□□ 2.41
NKD2-201ENST00000274150 KIAA0586Q9BVV6 1533 aa30.1■■■□□ 2.41
NKD2-201ENST00000274150 NUP160Q12769 1436 aa30.1■■■□□ 2.41
NKD2-201ENST00000274150 ARAP1Q96P48 1450 aa30.07■■■□□ 2.4
NKD2-201ENST00000274150 FHOD3Q2V2M9 1422 aa29.99■■■□□ 2.39
NKD2-201ENST00000274150 JPH4Q96JJ6 628 aa29.98■■■□□ 2.39
NKD2-201ENST00000274150 EFCAB5A4FU69 1503 aa29.95■■■□□ 2.38
NKD2-201ENST00000274150 VPS8Q8N3P4 1428 aa29.95■■■□□ 2.38
NKD2-201ENST00000274150 TTBK1Q5TCY1 1321 aaPredicted RBP29.94■■■□□ 2.38
NKD2-201ENST00000274150 PPARGC1BQ86YN6 1023 aaKnown RBP29.92■■■□□ 2.38
NKD2-201ENST00000274150 SAMD9Q5K651 1589 aa29.92■■■□□ 2.38
NKD2-201ENST00000274150 UGGT2Q9NYU1 1516 aa29.92■■■□□ 2.38
NKD2-201ENST00000274150 DISP1Q96F81 1524 aa29.86■■■□□ 2.37
NKD2-201ENST00000274150 OSCARQ8IYS5 282 aa29.83■■■□□ 2.37
NKD2-201ENST00000274150 ATP1B4Q9UN42 357 aaPredicted RBP29.83■■■□□ 2.37
NKD2-201ENST00000274150 KIAA0556O60303 1618 aa29.8■■■□□ 2.36
NKD2-201ENST00000274150 PRG4Q92954 1404 aaPredicted RBP29.8■■■□□ 2.36
NKD2-201ENST00000274150 CLASP1Q7Z460 1538 aa29.79■■■□□ 2.36
NKD2-201ENST00000274150 CARMIL2Q6F5E8 1435 aa29.76■■■□□ 2.35
NKD2-201ENST00000274150 APLP2Q06481 763 aa29.74■■■□□ 2.35
NKD2-201ENST00000274150 FMN1Q68DA7 1419 aa29.74■■■□□ 2.35
NKD2-201ENST00000274150 SHROOM2Q13796 1616 aa29.7■■■□□ 2.35
NKD2-201ENST00000274150 PCF11O94913 1555 aaKnown RBP29.69■■■□□ 2.34
NKD2-201ENST00000274150 ERCC6L2Q5T890 1561 aa29.68■■■□□ 2.34
NKD2-201ENST00000274150 CASKIN1Q8WXD9 1431 aa29.63■■■□□ 2.33
NKD2-201ENST00000274150 ARID3CA6NKF2 412 aa29.62■■■□□ 2.33
NKD2-201ENST00000274150 FYCO1Q9BQS8 1478 aa29.59■■■□□ 2.33
NKD2-201ENST00000274150 KANK4Q5T7N3 995 aaPredicted RBP29.57■■■□□ 2.32
NKD2-201ENST00000274150 PTPRGP23470 1445 aa29.56■■■□□ 2.32
NKD2-201ENST00000274150 PLB1Q6P1J6 1458 aa29.55■■■□□ 2.32
NKD2-201ENST00000274150 LRRIQ1Q96JM4 1722 aa29.49■■■□□ 2.31
NKD2-201ENST00000274150 RAPGEF6Q8TEU7 1601 aa29.47■■■□□ 2.31
NKD2-201ENST00000274150 TIAM1Q13009 1591 aa29.47■■■□□ 2.31
NKD2-201ENST00000274150 HECW1Q76N89 1606 aa29.45■■■□□ 2.3
NKD2-201ENST00000274150 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.43■■■□□ 2.3
NKD2-201ENST00000274150 HNRNPUL2Q1KMD3 747 aaKnown RBP29.43■■■□□ 2.3
NKD2-201ENST00000274150 NUP153P49790 1475 aaKnown RBP29.42■■■□□ 2.3
NKD2-201ENST00000274150 CDK13Q14004 1512 aaKnown RBP29.41■■■□□ 2.3
NKD2-201ENST00000274150 PCGF6Q9BYE7 350 aa29.41■■■□□ 2.3
NKD2-201ENST00000274150 EPRSP07814 1512 aaKnown RBP29.4■■■□□ 2.3
NKD2-201ENST00000274150 TRIM26Q12899 539 aaPredicted RBP29.39■■■□□ 2.3
NKD2-201ENST00000274150 MAP3K1Q13233 1512 aa29.39■■■□□ 2.3
NKD2-201ENST00000274150 CFAP43Q8NDM7 1665 aa29.38■■■□□ 2.29
NKD2-201ENST00000274150 ABCA8O94911 1581 aa29.38■■■□□ 2.29
NKD2-201ENST00000274150 LRRC9Q6ZRR7 1453 aa29.37■■■□□ 2.29
NKD2-201ENST00000274150 UACAQ9BZF9 1416 aa29.35■■■□□ 2.29
NKD2-201ENST00000274150 CCDC18Q5T9S5 1454 aa29.34■■■□□ 2.29
NKD2-201ENST00000274150 HRCP23327 699 aa29.34■■■□□ 2.29
NKD2-201ENST00000274150 MTUS2Q5JR59 1369 aa29.31■■■□□ 2.28
NKD2-201ENST00000274150 ARHGEF11O15085 1522 aa29.28■■■□□ 2.28
NKD2-201ENST00000274150 MAGI3Q5TCQ9 1506 aa29.26■■■□□ 2.27
NKD2-201ENST00000274150 ATP10BO94823 1461 aa29.26■■■□□ 2.27
NKD2-201ENST00000274150 ABCC2Q92887 1545 aa29.23■■■□□ 2.27
NKD2-201ENST00000274150 CDK11AQ9UQ88 783 aaPredicted RBP29.21■■■□□ 2.27
NKD2-201ENST00000274150 CYB5RLQ6IPT4 315 aa29.17■■■□□ 2.26
NKD2-201ENST00000274150 RIMBP3CA6NJZ7 1639 aa29.16■■■□□ 2.26
NKD2-201ENST00000274150 RIMBP3BA6NNM3 1639 aa29.16■■■□□ 2.26
NKD2-201ENST00000274150 RIMBP3Q9UFD9 1639 aa29.16■■■□□ 2.26
NKD2-201ENST00000274150 PLEKHD1A6NEE1 506 aa29.15■■■□□ 2.26
NKD2-201ENST00000274150 EHBP1L1Q8N3D4 1523 aa29.14■■■□□ 2.26
NKD2-201ENST00000274150 ADCY10Q96PN6 1610 aa29.14■■■□□ 2.26
NKD2-201ENST00000274150 PHLDB1Q86UU1 1377 aa29.14■■■□□ 2.25
NKD2-201ENST00000274150 UHRF1BP1LA0JNW5 1464 aa29.14■■■□□ 2.25
NKD2-201ENST00000274150 NCOA2Q15596 1464 aa29.09■■■□□ 2.25
NKD2-201ENST00000274150 SUPT6HQ7KZ85 1726 aaKnown RBP29.08■■■□□ 2.25
NKD2-201ENST00000274150 ZCCHC11Q5TAX3 1644 aaKnown RBP29.07■■■□□ 2.24
NKD2-201ENST00000274150 TROQ12816 1431 aaPredicted RBP29.07■■■□□ 2.24
NKD2-201ENST00000274150 KDM5BQ9UGL1 1544 aa29.06■■■□□ 2.24
NKD2-201ENST00000274150 KCNH8Q96L42 1107 aa29.02■■■□□ 2.24
NKD2-201ENST00000274150 NPM1P06748 294 aaKnown RBP eCLIP29■■■□□ 2.23
NKD2-201ENST00000274150 KIF14Q15058 1648 aa29■■■□□ 2.23
NKD2-201ENST00000274150 CCNB3Q8WWL7 1395 aa28.96■■■□□ 2.23
NKD2-201ENST00000274150 FAM50AQ14320 339 aaKnown RBP28.96■■■□□ 2.23
NKD2-201ENST00000274150 RRBP1Q9P2E9 1410 aaKnown RBP28.96■■■□□ 2.23
NKD2-201ENST00000274150 ITGAEP38570 1179 aa28.93■■■□□ 2.22
NKD2-201ENST00000274150 MYOM3Q5VTT5 1437 aa28.93■■■□□ 2.22
NKD2-201ENST00000274150 FGD6Q6ZV73 1430 aa28.9■■■□□ 2.22
NKD2-201ENST00000274150 ASXL2Q76L83 1435 aa28.86■■■□□ 2.21
NKD2-201ENST00000274150 WDR7Q9Y4E6 1490 aa28.83■■■□□ 2.21
NKD2-201ENST00000274150 ABCC10Q5T3U5 1492 aa28.83■■■□□ 2.21
NKD2-201ENST00000274150 GPATCH8Q9UKJ3 1502 aaKnown RBP28.82■■■□□ 2.2
NKD2-201ENST00000274150 CFDP1Q9UEE9 299 aaPredicted RBP28.82■■■□□ 2.2
NKD2-201ENST00000274150 ZNF777Q9ULD5 760 aaPredicted RBP28.81■■■□□ 2.2
NKD2-201ENST00000274150 ZEB1P37275 1124 aaPredicted RBP28.81■■■□□ 2.2
NKD2-201ENST00000274150 ZNF644Q9H582 1327 aaPredicted RBP28.8■■■□□ 2.2
NKD2-201ENST00000274150 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.8■■■□□ 2.2
NKD2-201ENST00000274150 TTC37Q6PGP7 1564 aa28.78■■■□□ 2.2
NKD2-201ENST00000274150 PTPN23Q9H3S7 1636 aa28.77■■■□□ 2.2
NKD2-201ENST00000274150 CDC42BPAQ5VT25 1732 aa28.76■■■□□ 2.19
NKD2-201ENST00000274150 MIA2Q96PC5 1412 aa28.75■■■□□ 2.19
NKD2-201ENST00000274150 ITSN2Q9NZM3 1697 aa28.72■■■□□ 2.19
NKD2-201ENST00000274150 DNAJC5Q9H3Z4 198 aa28.68■■■□□ 2.18
NKD2-201ENST00000274150 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.68■■■□□ 2.18
NKD2-201ENST00000274150 TCOF1Q13428 1488 aaKnown RBP28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms