RNA–Protein interactions for RNA: ENST00000272395.2

TRIM43-201, Transcript of tripartite motif containing 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM43, Length 1,682 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43-201ENST00000272395 PRXQ9BXM0 1461 aa13.82□□□□□ -0.2
TRIM43-201ENST00000272395 RAPGEF2Q9Y4G8 1499 aa13.82□□□□□ -0.2
TRIM43-201ENST00000272395 NUP160Q12769 1436 aa13.81□□□□□ -0.2
TRIM43-201ENST00000272395 EHMT2Q96KQ7 1210 aa13.8□□□□□ -0.2
TRIM43-201ENST00000272395 CLASP1Q7Z460 1538 aa13.78□□□□□ -0.2
TRIM43-201ENST00000272395 KIAA0586Q9BVV6 1533 aa13.71□□□□□ -0.21
TRIM43-201ENST00000272395 KIF21BO75037 1637 aa13.7□□□□□ -0.22
TRIM43-201ENST00000272395 JPH4Q96JJ6 628 aa13.69□□□□□ -0.22
TRIM43-201ENST00000272395 ARHGEF11O15085 1522 aa13.68□□□□□ -0.22
TRIM43-201ENST00000272395 ERCC6L2Q5T890 1561 aa13.67□□□□□ -0.22
TRIM43-201ENST00000272395 GOLGA3Q08378 1498 aa13.67□□□□□ -0.22
TRIM43-201ENST00000272395 PRG4Q92954 1404 aaPredicted RBP13.66□□□□□ -0.22
TRIM43-201ENST00000272395 IQGAP2Q13576 1575 aa13.66□□□□□ -0.22
TRIM43-201ENST00000272395 RIMBP3CA6NJZ7 1639 aa13.65□□□□□ -0.22
TRIM43-201ENST00000272395 RIMBP3BA6NNM3 1639 aa13.65□□□□□ -0.22
TRIM43-201ENST00000272395 SHROOM2Q13796 1616 aa13.65□□□□□ -0.22
TRIM43-201ENST00000272395 RIMBP3Q9UFD9 1639 aa13.65□□□□□ -0.22
TRIM43-201ENST00000272395 UBTFP17480 764 aaKnown RBP13.65□□□□□ -0.22
TRIM43-201ENST00000272395 ZEB1P37275 1124 aaPredicted RBP13.65□□□□□ -0.22
TRIM43-201ENST00000272395 RANGAP1P46060 587 aaPredicted RBP13.64□□□□□ -0.23
TRIM43-201ENST00000272395 CTTNBP2Q8WZ74 1663 aa13.62□□□□□ -0.23
TRIM43-201ENST00000272395 ARAP1Q96P48 1450 aa13.61□□□□□ -0.23
TRIM43-201ENST00000272395 TTBK1Q5TCY1 1321 aaPredicted RBP13.59□□□□□ -0.23
TRIM43-201ENST00000272395 CYB5RLQ6IPT4 315 aa13.59□□□□□ -0.23
TRIM43-201ENST00000272395 UGGT2Q9NYU1 1516 aa13.59□□□□□ -0.23
TRIM43-201ENST00000272395 DISP1Q96F81 1524 aa13.58□□□□□ -0.24
TRIM43-201ENST00000272395 PPARGC1BQ86YN6 1023 aaKnown RBP13.56□□□□□ -0.24
TRIM43-201ENST00000272395 P3H3Q8IVL6 736 aa13.56□□□□□ -0.24
TRIM43-201ENST00000272395 CARMIL2Q6F5E8 1435 aa13.56□□□□□ -0.24
TRIM43-201ENST00000272395 KIAA0556O60303 1618 aa13.53□□□□□ -0.24
TRIM43-201ENST00000272395 TNIKQ9UKE5 1360 aa13.52□□□□□ -0.24
TRIM43-201ENST00000272395 PTPRGP23470 1445 aa13.51□□□□□ -0.25
TRIM43-201ENST00000272395 FHOD3Q2V2M9 1422 aa13.49□□□□□ -0.25
TRIM43-201ENST00000272395 SAMD9Q5K651 1589 aa13.49□□□□□ -0.25
TRIM43-201ENST00000272395 ARHGAP35Q9NRY4 1499 aa13.46□□□□□ -0.25
TRIM43-201ENST00000272395 EFCAB5A4FU69 1503 aa13.45□□□□□ -0.26
TRIM43-201ENST00000272395 CLIP1P30622 1438 aa13.44□□□□□ -0.26
TRIM43-201ENST00000272395 CEP162Q5TB80 1403 aa13.44□□□□□ -0.26
TRIM43-201ENST00000272395 PLB1Q6P1J6 1458 aa13.44□□□□□ -0.26
TRIM43-201ENST00000272395 UACAQ9BZF9 1416 aa13.42□□□□□ -0.26
TRIM43-201ENST00000272395 ADCY10Q96PN6 1610 aa13.41□□□□□ -0.26
TRIM43-201ENST00000272395 ARID3CA6NKF2 412 aa13.4□□□□□ -0.26
TRIM43-201ENST00000272395 SENP3Q9H4L4 574 aaPredicted RBP13.4□□□□□ -0.26
TRIM43-201ENST00000272395 ABCA8O94911 1581 aa13.38□□□□□ -0.27
TRIM43-201ENST00000272395 ABCC2Q92887 1545 aa13.37□□□□□ -0.27
TRIM43-201ENST00000272395 UHRF1BP1LA0JNW5 1464 aa13.36□□□□□ -0.27
TRIM43-201ENST00000272395 FMN1Q68DA7 1419 aa13.34□□□□□ -0.27
TRIM43-201ENST00000272395 NPM1P06748 294 aaKnown RBP eCLIP13.34□□□□□ -0.27
TRIM43-201ENST00000272395 ATP1B4Q9UN42 357 aaPredicted RBP13.34□□□□□ -0.27
TRIM43-201ENST00000272395 RAPGEF6Q8TEU7 1601 aa13.33□□□□□ -0.28
TRIM43-201ENST00000272395 NUP153P49790 1475 aaKnown RBP13.32□□□□□ -0.28
TRIM43-201ENST00000272395 KDM5BQ9UGL1 1544 aa13.31□□□□□ -0.28
TRIM43-201ENST00000272395 ATP10BO94823 1461 aa13.3□□□□□ -0.28
TRIM43-201ENST00000272395 PCF11O94913 1555 aaKnown RBP13.29□□□□□ -0.28
TRIM43-201ENST00000272395 ZCCHC11Q5TAX3 1644 aaKnown RBP13.29□□□□□ -0.28
TRIM43-201ENST00000272395 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.28□□□□□ -0.28
TRIM43-201ENST00000272395 HNRNPUL2Q1KMD3 747 aaKnown RBP13.28□□□□□ -0.28
TRIM43-201ENST00000272395 ASXL2Q76L83 1435 aa13.27□□□□□ -0.28
TRIM43-201ENST00000272395 CASKIN1Q8WXD9 1431 aa13.27□□□□□ -0.28
TRIM43-201ENST00000272395 CDK13Q14004 1512 aaKnown RBP13.27□□□□□ -0.29
TRIM43-201ENST00000272395 MAPKBP1O60336 1514 aa13.26□□□□□ -0.29
TRIM43-201ENST00000272395 TRHP20396 242 aaPredicted RBP13.25□□□□□ -0.29
TRIM43-201ENST00000272395 HECW1Q76N89 1606 aa13.25□□□□□ -0.29
TRIM43-201ENST00000272395 FYCO1Q9BQS8 1478 aa13.25□□□□□ -0.29
TRIM43-201ENST00000272395 VPS8Q8N3P4 1428 aa13.24□□□□□ -0.29
TRIM43-201ENST00000272395 EPRSP07814 1512 aaKnown RBP13.24□□□□□ -0.29
TRIM43-201ENST00000272395 KCNH8Q96L42 1107 aa13.21□□□□□ -0.29
TRIM43-201ENST00000272395 WDR7Q9Y4E6 1490 aa13.21□□□□□ -0.29
TRIM43-201ENST00000272395 FAM69CQ0P6D2 419 aa13.21□□□□□ -0.3
TRIM43-201ENST00000272395 ABCC10Q5T3U5 1492 aa13.2□□□□□ -0.3
TRIM43-201ENST00000272395 CCER1Q8TC90 406 aaPredicted RBP13.2□□□□□ -0.3
TRIM43-201ENST00000272395 LRRIQ1Q96JM4 1722 aa13.19□□□□□ -0.3
TRIM43-201ENST00000272395 CCDC18Q5T9S5 1454 aa13.18□□□□□ -0.3
TRIM43-201ENST00000272395 PLEKHD1A6NEE1 506 aa13.18□□□□□ -0.3
TRIM43-201ENST00000272395 DIP2BQ9P265 1576 aa13.17□□□□□ -0.3
TRIM43-201ENST00000272395 MAGI3Q5TCQ9 1506 aa13.15□□□□□ -0.3
TRIM43-201ENST00000272395 CDK11AQ9UQ88 783 aaPredicted RBP13.14□□□□□ -0.31
TRIM43-201ENST00000272395 TROQ12816 1431 aaPredicted RBP13.12□□□□□ -0.31
TRIM43-201ENST00000272395 KIF13AQ9H1H9 1805 aa13.12□□□□□ -0.31
TRIM43-201ENST00000272395 GLI2P10070 1586 aa13.11□□□□□ -0.31
TRIM43-201ENST00000272395 TIAM1Q13009 1591 aa13.1□□□□□ -0.31
TRIM43-201ENST00000272395 MTUS2Q5JR59 1369 aa13.1□□□□□ -0.31
TRIM43-201ENST00000272395 KANK4Q5T7N3 995 aaPredicted RBP13.1□□□□□ -0.31
TRIM43-201ENST00000272395 KIF14Q15058 1648 aa13.09□□□□□ -0.31
TRIM43-201ENST00000272395 CD109Q6YHK3 1445 aa13.08□□□□□ -0.32
TRIM43-201ENST00000272395 CFAP43Q8NDM7 1665 aa13.08□□□□□ -0.32
TRIM43-201ENST00000272395 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.08□□□□□ -0.32
TRIM43-201ENST00000272395 APLP2Q06481 763 aa13.08□□□□□ -0.32
TRIM43-201ENST00000272395 TTC37Q6PGP7 1564 aa13.07□□□□□ -0.32
TRIM43-201ENST00000272395 MAP3K4Q9Y6R4 1608 aa13.07□□□□□ -0.32
TRIM43-201ENST00000272395 ABCA9Q8IUA7 1624 aa13.06□□□□□ -0.32
TRIM43-201ENST00000272395 LRRC9Q6ZRR7 1453 aa13.05□□□□□ -0.32
TRIM43-201ENST00000272395 MAP3K1Q13233 1512 aa13.05□□□□□ -0.32
TRIM43-201ENST00000272395 EHBP1L1Q8N3D4 1523 aa13.05□□□□□ -0.32
TRIM43-201ENST00000272395 TSPOAP1O95153 1857 aa13.04□□□□□ -0.32
TRIM43-201ENST00000272395 PPRC1Q5VV67 1664 aaKnown RBP13.03□□□□□ -0.32
TRIM43-201ENST00000272395 NCOA2Q15596 1464 aa13□□□□□ -0.33
TRIM43-201ENST00000272395 PLCH2O75038 1416 aa13□□□□□ -0.33
TRIM43-201ENST00000272395 TEX14Q8IWB6 1497 aa13□□□□□ -0.33
TRIM43-201ENST00000272395 CCNB3Q8WWL7 1395 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms