RNA–Protein interactions for RNA: ENST00000271651.7

CTSK-201, Transcript of cathepsin K, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSK, Length 1,692 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSK-201ENST00000271651 ARHGAP35Q9NRY4 1499 aa18.47■□□□□ 0.55
CTSK-201ENST00000271651 GRIN2BQ13224 1484 aa18.46■□□□□ 0.55
CTSK-201ENST00000271651 CTTNBP2Q8WZ74 1663 aa18.46■□□□□ 0.55
CTSK-201ENST00000271651 AQRO60306 1485 aaKnown RBP eCLIP18.44■□□□□ 0.54
CTSK-201ENST00000271651 FHAD1B1AJZ9 1412 aa18.44■□□□□ 0.54
CTSK-201ENST00000271651 EFCAB5A4FU69 1503 aa18.42■□□□□ 0.54
CTSK-201ENST00000271651 ADAMTS12P58397 1594 aa18.4■□□□□ 0.54
CTSK-201ENST00000271651 ZNF608Q9ULD9 1512 aaPredicted RBP18.38■□□□□ 0.53
CTSK-201ENST00000271651 PHF23Q9BUL5 403 aaPredicted RBP18.37■□□□□ 0.53
CTSK-201ENST00000271651 EIF4G3O43432 1585 aaKnown RBP18.36■□□□□ 0.53
CTSK-201ENST00000271651 MYT1Q01538 1121 aa18.33■□□□□ 0.52
CTSK-201ENST00000271651 TTBK1Q5TCY1 1321 aaPredicted RBP18.33■□□□□ 0.52
CTSK-201ENST00000271651 MAGI1Q96QZ7 1491 aaPredicted RBP18.29■□□□□ 0.52
CTSK-201ENST00000271651 SNAPC4Q5SXM2 1469 aa18.29■□□□□ 0.52
CTSK-201ENST00000271651 MAP3K1Q13233 1512 aa18.28■□□□□ 0.52
CTSK-201ENST00000271651 SAMD9Q5K651 1589 aa18.27■□□□□ 0.52
CTSK-201ENST00000271651 FMN1Q68DA7 1419 aa18.25■□□□□ 0.51
CTSK-201ENST00000271651 IQGAP2Q13576 1575 aa18.25■□□□□ 0.51
CTSK-201ENST00000271651 FHOD3Q2V2M9 1422 aa18.25■□□□□ 0.51
CTSK-201ENST00000271651 P3H3Q8IVL6 736 aa18.22■□□□□ 0.51
CTSK-201ENST00000271651 GRIN2AQ12879 1464 aa18.22■□□□□ 0.51
CTSK-201ENST00000271651 FYCO1Q9BQS8 1478 aa18.22■□□□□ 0.51
CTSK-201ENST00000271651 SYNJ2O15056 1496 aa18.21■□□□□ 0.51
CTSK-201ENST00000271651 TIAM1Q13009 1591 aa18.21■□□□□ 0.51
CTSK-201ENST00000271651 CASKIN1Q8WXD9 1431 aa18.21■□□□□ 0.5
CTSK-201ENST00000271651 PCF11O94913 1555 aaKnown RBP18.2■□□□□ 0.5
CTSK-201ENST00000271651 SCAF1Q9H7N4 1312 aaKnown RBP18.19■□□□□ 0.5
CTSK-201ENST00000271651 KIAA0586Q9BVV6 1533 aa18.19■□□□□ 0.5
CTSK-201ENST00000271651 CHMP7Q8WUX9 453 aaPredicted RBP18.17■□□□□ 0.5
CTSK-201ENST00000271651 CFAP43Q8NDM7 1665 aa18.16■□□□□ 0.5
CTSK-201ENST00000271651 UGGT2Q9NYU1 1516 aa18.16■□□□□ 0.5
CTSK-201ENST00000271651 KANK4Q5T7N3 995 aaPredicted RBP18.15■□□□□ 0.5
CTSK-201ENST00000271651 LRRC9Q6ZRR7 1453 aa18.11■□□□□ 0.49
CTSK-201ENST00000271651 ATP1B4Q9UN42 357 aaPredicted RBP18.11■□□□□ 0.49
CTSK-201ENST00000271651 FBLN2P98095 1184 aa18.08■□□□□ 0.48
CTSK-201ENST00000271651 NUP160Q12769 1436 aa18.07■□□□□ 0.48
CTSK-201ENST00000271651 CEP170Q5SW79 1584 aa18.07■□□□□ 0.48
CTSK-201ENST00000271651 RRBP1Q9P2E9 1410 aaKnown RBP18.06■□□□□ 0.48
CTSK-201ENST00000271651 KIAA0556O60303 1618 aa18.04■□□□□ 0.48
CTSK-201ENST00000271651 HECW1Q76N89 1606 aa18.04■□□□□ 0.48
CTSK-201ENST00000271651 CCDC18Q5T9S5 1454 aa18.04■□□□□ 0.48
CTSK-201ENST00000271651 DISP1Q96F81 1524 aa18.02■□□□□ 0.47
CTSK-201ENST00000271651 CCNB3Q8WWL7 1395 aa18.01■□□□□ 0.47
CTSK-201ENST00000271651 HNRNPUL2Q1KMD3 747 aaKnown RBP18■□□□□ 0.47
CTSK-201ENST00000271651 CARMIL2Q6F5E8 1435 aa18■□□□□ 0.47
CTSK-201ENST00000271651 CCER1Q8TC90 406 aaPredicted RBP17.99■□□□□ 0.47
CTSK-201ENST00000271651 MTUS2Q5JR59 1369 aa17.98■□□□□ 0.47
CTSK-201ENST00000271651 ACIN1Q9UKV3 1341 aaKnown RBP17.97■□□□□ 0.47
CTSK-201ENST00000271651 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.96■□□□□ 0.47
CTSK-201ENST00000271651 LRRIQ1Q96JM4 1722 aa17.95■□□□□ 0.46
CTSK-201ENST00000271651 EHBP1L1Q8N3D4 1523 aa17.95■□□□□ 0.46
CTSK-201ENST00000271651 JPH4Q96JJ6 628 aa17.94■□□□□ 0.46
CTSK-201ENST00000271651 PHLDB1Q86UU1 1377 aa17.93■□□□□ 0.46
CTSK-201ENST00000271651 CHD1O14646 1710 aa17.93■□□□□ 0.46
CTSK-201ENST00000271651 EPRSP07814 1512 aaKnown RBP17.92■□□□□ 0.46
CTSK-201ENST00000271651 SUPT6HQ7KZ85 1726 aaKnown RBP17.91■□□□□ 0.46
CTSK-201ENST00000271651 RAPGEF6Q8TEU7 1601 aa17.91■□□□□ 0.46
CTSK-201ENST00000271651 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.88■□□□□ 0.45
CTSK-201ENST00000271651 CENPBP07199 599 aaPredicted RBP17.87■□□□□ 0.45
CTSK-201ENST00000271651 NCOA2Q15596 1464 aa17.86■□□□□ 0.45
CTSK-201ENST00000271651 CDK11AQ9UQ88 783 aaPredicted RBP17.84■□□□□ 0.45
CTSK-201ENST00000271651 NUP153P49790 1475 aaKnown RBP17.83■□□□□ 0.45
CTSK-201ENST00000271651 FGD6Q6ZV73 1430 aa17.83■□□□□ 0.44
CTSK-201ENST00000271651 FAM50AQ14320 339 aaKnown RBP17.83■□□□□ 0.44
CTSK-201ENST00000271651 CDK13Q14004 1512 aaKnown RBP17.83■□□□□ 0.44
CTSK-201ENST00000271651 MYOM3Q5VTT5 1437 aa17.82■□□□□ 0.44
CTSK-201ENST00000271651 PRG4Q92954 1404 aaPredicted RBP17.82■□□□□ 0.44
CTSK-201ENST00000271651 ARHGEF11O15085 1522 aa17.81■□□□□ 0.44
CTSK-201ENST00000271651 MAGI3Q5TCQ9 1506 aa17.81■□□□□ 0.44
CTSK-201ENST00000271651 SHROOM2Q13796 1616 aa17.8■□□□□ 0.44
CTSK-201ENST00000271651 ITGAEP38570 1179 aa17.78■□□□□ 0.44
CTSK-201ENST00000271651 PLB1Q6P1J6 1458 aa17.77■□□□□ 0.44
CTSK-201ENST00000271651 ABCA8O94911 1581 aa17.77■□□□□ 0.43
CTSK-201ENST00000271651 NEUROD1Q13562 356 aa17.75■□□□□ 0.43
CTSK-201ENST00000271651 PTPRGP23470 1445 aa17.75■□□□□ 0.43
CTSK-201ENST00000271651 CLSPNQ9HAW4 1339 aa17.73■□□□□ 0.43
CTSK-201ENST00000271651 ARID3CA6NKF2 412 aa17.73■□□□□ 0.43
CTSK-201ENST00000271651 MIA2Q96PC5 1412 aa17.73■□□□□ 0.43
CTSK-201ENST00000271651 CLASP1Q7Z460 1538 aa17.72■□□□□ 0.43
CTSK-201ENST00000271651 PTPN23Q9H3S7 1636 aa17.72■□□□□ 0.43
CTSK-201ENST00000271651 TROQ12816 1431 aaPredicted RBP17.71■□□□□ 0.43
CTSK-201ENST00000271651 SETD5Q9C0A6 1442 aa17.71■□□□□ 0.43
CTSK-201ENST00000271651 TCOF1Q13428 1488 aaKnown RBP17.7■□□□□ 0.42
CTSK-201ENST00000271651 ADCY10Q96PN6 1610 aa17.67■□□□□ 0.42
CTSK-201ENST00000271651 DIEXFQ68CQ4 756 aaKnown RBP17.67■□□□□ 0.42
CTSK-201ENST00000271651 DHX57Q6P158 1386 aaKnown RBP17.67■□□□□ 0.42
CTSK-201ENST00000271651 RAB3GAP2Q9H2M9 1393 aa17.67■□□□□ 0.42
CTSK-201ENST00000271651 GTF3C3Q9Y5Q9 886 aa17.66■□□□□ 0.42
CTSK-201ENST00000271651 UACAQ9BZF9 1416 aa17.65■□□□□ 0.42
CTSK-201ENST00000271651 PLEKHD1A6NEE1 506 aa17.65■□□□□ 0.42
CTSK-201ENST00000271651 ATP10BO94823 1461 aa17.64■□□□□ 0.41
CTSK-201ENST00000271651 ITSN2Q9NZM3 1697 aa17.63■□□□□ 0.41
CTSK-201ENST00000271651 KIF14Q15058 1648 aa17.61■□□□□ 0.41
CTSK-201ENST00000271651 HFM1A2PYH4 1435 aa17.6■□□□□ 0.41
CTSK-201ENST00000271651 ABCC2Q92887 1545 aa17.59■□□□□ 0.41
CTSK-201ENST00000271651 ERCC6L2Q5T890 1561 aa17.58■□□□□ 0.4
CTSK-201ENST00000271651 PTPRKQ15262 1439 aa17.56■□□□□ 0.4
CTSK-201ENST00000271651 AKNAQ7Z591 1439 aa17.56■□□□□ 0.4
CTSK-201ENST00000271651 UHRF1BP1LA0JNW5 1464 aa17.55■□□□□ 0.4
CTSK-201ENST00000271651 GPATCH8Q9UKJ3 1502 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms