RNA–Protein interactions for RNA: ENST00000269740.8

SLC39A3-201, Transcript of solute carrier family 39 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC39A3, Length 1,502 nt, Biotype protein coding, Subcellular localisation Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A3-201ENST00000269740 CLASP1Q7Z460 1538 aa38.84■■■■□ 3.81
SLC39A3-201ENST00000269740 UBTFP17480 764 aaKnown RBP38.84■■■■□ 3.81
SLC39A3-201ENST00000269740 EHMT2Q96KQ7 1210 aa38.83■■■■□ 3.81
SLC39A3-201ENST00000269740 IQGAP2Q13576 1575 aa38.76■■■■□ 3.8
SLC39A3-201ENST00000269740 LOC105371045A0A1W2PR82 267 aa38.72■■■■□ 3.79
SLC39A3-201ENST00000269740 TNIKQ9UKE5 1360 aa38.69■■■■□ 3.78
SLC39A3-201ENST00000269740 SHROOM2Q13796 1616 aa38.65■■■■□ 3.78
SLC39A3-201ENST00000269740 JPH4Q96JJ6 628 aa38.64■■■■□ 3.78
SLC39A3-201ENST00000269740 UGGT2Q9NYU1 1516 aa38.58■■■■□ 3.77
SLC39A3-201ENST00000269740 PRG4Q92954 1404 aaPredicted RBP38.47■■■■□ 3.75
SLC39A3-201ENST00000269740 CARMIL2Q6F5E8 1435 aa38.44■■■■□ 3.74
SLC39A3-201ENST00000269740 DISP1Q96F81 1524 aa38.41■■■■□ 3.74
SLC39A3-201ENST00000269740 EFCAB5A4FU69 1503 aa38.4■■■■□ 3.74
SLC39A3-201ENST00000269740 SAMD9Q5K651 1589 aa38.4■■■■□ 3.74
SLC39A3-201ENST00000269740 RANGAP1P46060 587 aaPredicted RBP38.38■■■■□ 3.73
SLC39A3-201ENST00000269740 KIAA0556O60303 1618 aa38.36■■■■□ 3.73
SLC39A3-201ENST00000269740 CEP162Q5TB80 1403 aa38.34■■■■□ 3.73
SLC39A3-201ENST00000269740 ERCC6L2Q5T890 1561 aa38.33■■■■□ 3.73
SLC39A3-201ENST00000269740 ARHGEF11O15085 1522 aa38.33■■■■□ 3.73
SLC39A3-201ENST00000269740 CLIP1P30622 1438 aa38.33■■■■□ 3.73
SLC39A3-201ENST00000269740 DNAJC5Q9H3Z4 198 aa38.32■■■■□ 3.72
SLC39A3-201ENST00000269740 ARHGAP35Q9NRY4 1499 aa38.28■■■■□ 3.72
SLC39A3-201ENST00000269740 RIMBP3CA6NJZ7 1639 aa38.25■■■■□ 3.71
SLC39A3-201ENST00000269740 RIMBP3BA6NNM3 1639 aa38.25■■■■□ 3.71
SLC39A3-201ENST00000269740 RIMBP3Q9UFD9 1639 aa38.25■■■■□ 3.71
SLC39A3-201ENST00000269740 P3H3Q8IVL6 736 aa38.2■■■■□ 3.71
SLC39A3-201ENST00000269740 FHOD3Q2V2M9 1422 aa38.15■■■■□ 3.7
SLC39A3-201ENST00000269740 PTPRGP23470 1445 aa38.14■■■■□ 3.7
SLC39A3-201ENST00000269740 ARAP1Q96P48 1450 aa38.1■■■■□ 3.69
SLC39A3-201ENST00000269740 FMN1Q68DA7 1419 aa38.04■■■■□ 3.68
SLC39A3-201ENST00000269740 TTBK1Q5TCY1 1321 aaPredicted RBP38■■■■□ 3.67
SLC39A3-201ENST00000269740 CYB5RLQ6IPT4 315 aa37.93■■■■□ 3.66
SLC39A3-201ENST00000269740 UACAQ9BZF9 1416 aa37.91■■■■□ 3.66
SLC39A3-201ENST00000269740 ABCA8O94911 1581 aa37.9■■■■□ 3.66
SLC39A3-201ENST00000269740 PLB1Q6P1J6 1458 aa37.88■■■■□ 3.66
SLC39A3-201ENST00000269740 RAPGEF6Q8TEU7 1601 aa37.86■■■■□ 3.65
SLC39A3-201ENST00000269740 UHRF1BP1LA0JNW5 1464 aa37.86■■■■□ 3.65
SLC39A3-201ENST00000269740 VPS8Q8N3P4 1428 aa37.85■■■■□ 3.65
SLC39A3-201ENST00000269740 ABCC2Q92887 1545 aa37.83■■■■□ 3.65
SLC39A3-201ENST00000269740 CASKIN1Q8WXD9 1431 aa37.81■■■■□ 3.64
SLC39A3-201ENST00000269740 ADCY10Q96PN6 1610 aa37.78■■■■□ 3.64
SLC39A3-201ENST00000269740 PCF11O94913 1555 aaKnown RBP37.77■■■■□ 3.64
SLC39A3-201ENST00000269740 FYCO1Q9BQS8 1478 aa37.76■■■■□ 3.64
SLC39A3-201ENST00000269740 HECW1Q76N89 1606 aa37.75■■■■□ 3.63
SLC39A3-201ENST00000269740 NUP153P49790 1475 aaKnown RBP37.71■■■■□ 3.63
SLC39A3-201ENST00000269740 KDM5BQ9UGL1 1544 aa37.66■■■■□ 3.62
SLC39A3-201ENST00000269740 ATP1B4Q9UN42 357 aaPredicted RBP37.65■■■■□ 3.62
SLC39A3-201ENST00000269740 EPRSP07814 1512 aaKnown RBP37.61■■■■□ 3.61
SLC39A3-201ENST00000269740 NPM1P06748 294 aaKnown RBP eCLIP37.61■■■■□ 3.61
SLC39A3-201ENST00000269740 LRRIQ1Q96JM4 1722 aa37.59■■■■□ 3.61
SLC39A3-201ENST00000269740 ATP10BO94823 1461 aa37.59■■■■□ 3.61
SLC39A3-201ENST00000269740 CCDC18Q5T9S5 1454 aa37.58■■■■□ 3.61
SLC39A3-201ENST00000269740 ZCCHC11Q5TAX3 1644 aaKnown RBP37.57■■■■□ 3.6
SLC39A3-201ENST00000269740 ARID3CA6NKF2 412 aa37.51■■■■□ 3.59
SLC39A3-201ENST00000269740 CDK13Q14004 1512 aaKnown RBP37.5■■■■□ 3.59
SLC39A3-201ENST00000269740 MAP3K1Q13233 1512 aa37.47■■■■□ 3.59
SLC39A3-201ENST00000269740 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.47■■■■□ 3.59
SLC39A3-201ENST00000269740 HNRNPUL2Q1KMD3 747 aaKnown RBP37.47■■■■□ 3.59
SLC39A3-201ENST00000269740 APLP2Q06481 763 aa37.44■■■■□ 3.58
SLC39A3-201ENST00000269740 CDK11AQ9UQ88 783 aaPredicted RBP37.43■■■■□ 3.58
SLC39A3-201ENST00000269740 MAPKBP1O60336 1514 aa37.42■■■■□ 3.58
SLC39A3-201ENST00000269740 CFAP43Q8NDM7 1665 aa37.42■■■■□ 3.58
SLC39A3-201ENST00000269740 TIAM1Q13009 1591 aa37.41■■■■□ 3.58
SLC39A3-201ENST00000269740 PLEKHD1A6NEE1 506 aa37.37■■■■□ 3.57
SLC39A3-201ENST00000269740 ASXL2Q76L83 1435 aa37.36■■■■□ 3.57
SLC39A3-201ENST00000269740 WDR7Q9Y4E6 1490 aa37.31■■■■□ 3.56
SLC39A3-201ENST00000269740 TROQ12816 1431 aaPredicted RBP37.26■■■■□ 3.56
SLC39A3-201ENST00000269740 MTUS2Q5JR59 1369 aa37.25■■■■□ 3.55
SLC39A3-201ENST00000269740 MAGI3Q5TCQ9 1506 aa37.25■■■■□ 3.55
SLC39A3-201ENST00000269740 LRRC9Q6ZRR7 1453 aa37.24■■■■□ 3.55
SLC39A3-201ENST00000269740 EHBP1L1Q8N3D4 1523 aa37.22■■■■□ 3.55
SLC39A3-201ENST00000269740 KANK4Q5T7N3 995 aaPredicted RBP37.18■■■■□ 3.54
SLC39A3-201ENST00000269740 KCNH8Q96L42 1107 aa37.14■■■■□ 3.54
SLC39A3-201ENST00000269740 ABCC10Q5T3U5 1492 aa37.13■■■■□ 3.53
SLC39A3-201ENST00000269740 KIF14Q15058 1648 aa37.12■■■■□ 3.53
SLC39A3-201ENST00000269740 DIP2BQ9P265 1576 aa37.08■■■■□ 3.53
SLC39A3-201ENST00000269740 SUPT6HQ7KZ85 1726 aaKnown RBP37.08■■■■□ 3.53
SLC39A3-201ENST00000269740 GLI2P10070 1586 aa37.08■■■■□ 3.53
SLC39A3-201ENST00000269740 ABCA9Q8IUA7 1624 aa37.04■■■■□ 3.52
SLC39A3-201ENST00000269740 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.03■■■■□ 3.526e-6■■□□□ 13.3
SLC39A3-201ENST00000269740 KIF13AQ9H1H9 1805 aa37.03■■■■□ 3.52
SLC39A3-201ENST00000269740 FAM69CQ0P6D2 419 aa37■■■■□ 3.51
SLC39A3-201ENST00000269740 NCOA2Q15596 1464 aa36.99■■■■□ 3.51
SLC39A3-201ENST00000269740 TTC37Q6PGP7 1564 aa36.95■■■■□ 3.51
SLC39A3-201ENST00000269740 MAP3K4Q9Y6R4 1608 aa36.93■■■■□ 3.5
SLC39A3-201ENST00000269740 PPARGC1BQ86YN6 1023 aaKnown RBP36.91■■■■□ 3.5
SLC39A3-201ENST00000269740 MYO5CQ9NQX4 1742 aa36.89■■■■□ 3.5
SLC39A3-201ENST00000269740 CD109Q6YHK3 1445 aa36.88■■■■□ 3.49
SLC39A3-201ENST00000269740 CCNB3Q8WWL7 1395 aa36.88■■■■□ 3.49
SLC39A3-201ENST00000269740 TRHP20396 242 aaPredicted RBP36.88■■■■□ 3.49
SLC39A3-201ENST00000269740 CDC42BPAQ5VT25 1732 aa36.86■■■■□ 3.49
SLC39A3-201ENST00000269740 GPATCH8Q9UKJ3 1502 aaKnown RBP36.84■■■■□ 3.49
SLC39A3-201ENST00000269740 ITSN2Q9NZM3 1697 aa36.84■■■■□ 3.49
SLC39A3-201ENST00000269740 PLCH2O75038 1416 aa36.83■■■■□ 3.49
SLC39A3-201ENST00000269740 ARAP3Q8WWN8 1544 aa36.83■■■■□ 3.49
SLC39A3-201ENST00000269740 PREX2Q70Z35 1606 aa36.81■■■■□ 3.48
SLC39A3-201ENST00000269740 CDC42BPBQ9Y5S2 1711 aa36.79■■■■□ 3.48
SLC39A3-201ENST00000269740 PHLDB1Q86UU1 1377 aa36.79■■■■□ 3.48
SLC39A3-201ENST00000269740 MYOM3Q5VTT5 1437 aa36.78■■■■□ 3.48
SLC39A3-201ENST00000269740 TSPOAP1O95153 1857 aa36.76■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms