RNA–Protein interactions for RNA: ENST00000269025.8

LRRC46-201, Transcript of leucine rich repeat containing 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC46, Length 1,922 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46-201ENST00000269025 CENPBP07199 599 aaPredicted RBP17.54■□□□□ 0.4
LRRC46-201ENST00000269025 VPS8Q8N3P4 1428 aa17.53■□□□□ 0.4
LRRC46-201ENST00000269025 CLIP1P30622 1438 aa17.52■□□□□ 0.39
LRRC46-201ENST00000269025 ZNF316A6NFI3 1004 aaPredicted RBP17.51■□□□□ 0.39
LRRC46-201ENST00000269025 NEUROD1Q13562 356 aa17.51■□□□□ 0.39
LRRC46-201ENST00000269025 PBRM1Q86U86 1689 aa17.51■□□□□ 0.39
LRRC46-201ENST00000269025 FHAD1B1AJZ9 1412 aa17.5■□□□□ 0.39
LRRC46-201ENST00000269025 RANGAP1P46060 587 aaPredicted RBP17.49■□□□□ 0.39
LRRC46-201ENST00000269025 EIF4G3O43432 1585 aaKnown RBP17.49■□□□□ 0.39
LRRC46-201ENST00000269025 ADAMTS12P58397 1594 aa17.43■□□□□ 0.38
LRRC46-201ENST00000269025 SNAPC4Q5SXM2 1469 aa17.42■□□□□ 0.38
LRRC46-201ENST00000269025 MAGI1Q96QZ7 1491 aaPredicted RBP17.41■□□□□ 0.38
LRRC46-201ENST00000269025 CLSPNQ9HAW4 1339 aa17.39■□□□□ 0.37
LRRC46-201ENST00000269025 CHMP7Q8WUX9 453 aaPredicted RBP17.37■□□□□ 0.37
LRRC46-201ENST00000269025 TTBK1Q5TCY1 1321 aaPredicted RBP17.37■□□□□ 0.37
LRRC46-201ENST00000269025 ARHGAP35Q9NRY4 1499 aa17.36■□□□□ 0.37
LRRC46-201ENST00000269025 SYNJ2O15056 1496 aa17.35■□□□□ 0.37
LRRC46-201ENST00000269025 CTTNBP2Q8WZ74 1663 aa17.35■□□□□ 0.37
LRRC46-201ENST00000269025 GTF3C3Q9Y5Q9 886 aa17.34■□□□□ 0.37
LRRC46-201ENST00000269025 GRIN2AQ12879 1464 aa17.34■□□□□ 0.37
LRRC46-201ENST00000269025 ARAP1Q96P48 1450 aa17.33■□□□□ 0.36
LRRC46-201ENST00000269025 APLP2Q06481 763 aa17.33■□□□□ 0.36
LRRC46-201ENST00000269025 FBLN2P98095 1184 aa17.32■□□□□ 0.36
LRRC46-201ENST00000269025 P3H3Q8IVL6 736 aa17.27■□□□□ 0.35
LRRC46-201ENST00000269025 KIAA0586Q9BVV6 1533 aa17.27■□□□□ 0.35
LRRC46-201ENST00000269025 EFCAB5A4FU69 1503 aa17.26■□□□□ 0.35
LRRC46-201ENST00000269025 HNRNPUL2Q1KMD3 747 aaKnown RBP17.26■□□□□ 0.35
LRRC46-201ENST00000269025 IQGAP2Q13576 1575 aa17.24■□□□□ 0.35
LRRC46-201ENST00000269025 NUP160Q12769 1436 aa17.22■□□□□ 0.35
LRRC46-201ENST00000269025 FHOD3Q2V2M9 1422 aa17.2■□□□□ 0.34
LRRC46-201ENST00000269025 RRBP1Q9P2E9 1410 aaKnown RBP17.2■□□□□ 0.34
LRRC46-201ENST00000269025 CEP170Q5SW79 1584 aa17.2■□□□□ 0.34
LRRC46-201ENST00000269025 SAMD9Q5K651 1589 aa17.2■□□□□ 0.34
LRRC46-201ENST00000269025 UGGT2Q9NYU1 1516 aa17.18■□□□□ 0.34
LRRC46-201ENST00000269025 MIER1Q8N108 512 aa17.18■□□□□ 0.34
LRRC46-201ENST00000269025 DHX57Q6P158 1386 aaKnown RBP17.18■□□□□ 0.34
LRRC46-201ENST00000269025 JPH4Q96JJ6 628 aa17.16■□□□□ 0.34
LRRC46-201ENST00000269025 FMN1Q68DA7 1419 aa17.15■□□□□ 0.34
LRRC46-201ENST00000269025 MYT1Q01538 1121 aa17.13■□□□□ 0.33
LRRC46-201ENST00000269025 CHD1O14646 1710 aa17.11■□□□□ 0.33
LRRC46-201ENST00000269025 DISP1Q96F81 1524 aa17.11■□□□□ 0.33
LRRC46-201ENST00000269025 MAP3K1Q13233 1512 aa17.1■□□□□ 0.33
LRRC46-201ENST00000269025 CASKIN1Q8WXD9 1431 aa17.1■□□□□ 0.33
LRRC46-201ENST00000269025 ATP1B4Q9UN42 357 aaPredicted RBP17.08■□□□□ 0.33
LRRC46-201ENST00000269025 KANK4Q5T7N3 995 aaPredicted RBP17.08■□□□□ 0.32
LRRC46-201ENST00000269025 FYCO1Q9BQS8 1478 aa17.07■□□□□ 0.32
LRRC46-201ENST00000269025 CARMIL2Q6F5E8 1435 aa17.06■□□□□ 0.32
LRRC46-201ENST00000269025 KIAA0556O60303 1618 aa17.06■□□□□ 0.32
LRRC46-201ENST00000269025 PCF11O94913 1555 aaKnown RBP17.05■□□□□ 0.32
LRRC46-201ENST00000269025 CCNB3Q8WWL7 1395 aa17.03■□□□□ 0.32
LRRC46-201ENST00000269025 TIAM1Q13009 1591 aa17.01■□□□□ 0.31
LRRC46-201ENST00000269025 PRG4Q92954 1404 aaPredicted RBP17■□□□□ 0.31
LRRC46-201ENST00000269025 YTHDC1Q96MU7 727 aaKnown RBP16.98■□□□□ 0.31
LRRC46-201ENST00000269025 LRRC9Q6ZRR7 1453 aa16.96■□□□□ 0.31
LRRC46-201ENST00000269025 SHROOM2Q13796 1616 aa16.95■□□□□ 0.3
LRRC46-201ENST00000269025 CLASP1Q7Z460 1538 aa16.95■□□□□ 0.3
LRRC46-201ENST00000269025 OSCARQ8IYS5 282 aa16.94■□□□□ 0.3
LRRC46-201ENST00000269025 CFAP43Q8NDM7 1665 aa16.93■□□□□ 0.3
LRRC46-201ENST00000269025 HECW1Q76N89 1606 aa16.92■□□□□ 0.3
LRRC46-201ENST00000269025 CCDC18Q5T9S5 1454 aa16.91■□□□□ 0.3
LRRC46-201ENST00000269025 PTPRGP23470 1445 aa16.91■□□□□ 0.3
LRRC46-201ENST00000269025 EPRSP07814 1512 aaKnown RBP16.9■□□□□ 0.3
LRRC46-201ENST00000269025 LRRIQ1Q96JM4 1722 aa16.89■□□□□ 0.3
LRRC46-201ENST00000269025 PLB1Q6P1J6 1458 aa16.89■□□□□ 0.29
LRRC46-201ENST00000269025 RAPGEF6Q8TEU7 1601 aa16.88■□□□□ 0.29
LRRC46-201ENST00000269025 MTUS2Q5JR59 1369 aa16.88■□□□□ 0.29
LRRC46-201ENST00000269025 NUP153P49790 1475 aaKnown RBP16.88■□□□□ 0.29
LRRC46-201ENST00000269025 TIMELESSQ9UNS1 1208 aa16.86■□□□□ 0.29
LRRC46-201ENST00000269025 ARID3CA6NKF2 412 aa16.86■□□□□ 0.29
LRRC46-201ENST00000269025 RAB3GAP2Q9H2M9 1393 aa16.85■□□□□ 0.29
LRRC46-201ENST00000269025 MAPKBP1O60336 1514 aa16.85■□□□□ 0.29
LRRC46-201ENST00000269025 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.85■□□□□ 0.29
LRRC46-201ENST00000269025 SETD5Q9C0A6 1442 aa16.84■□□□□ 0.29
LRRC46-201ENST00000269025 ERCC6L2Q5T890 1561 aa16.84■□□□□ 0.29
LRRC46-201ENST00000269025 CDK11AQ9UQ88 783 aaPredicted RBP16.84■□□□□ 0.29
LRRC46-201ENST00000269025 CDK13Q14004 1512 aaKnown RBP16.83■□□□□ 0.29
LRRC46-201ENST00000269025 ABCA8O94911 1581 aa16.83■□□□□ 0.28
LRRC46-201ENST00000269025 PHLDB1Q86UU1 1377 aa16.82■□□□□ 0.28
LRRC46-201ENST00000269025 MAGI3Q5TCQ9 1506 aa16.8■□□□□ 0.28
LRRC46-201ENST00000269025 EHBP1L1Q8N3D4 1523 aa16.8■□□□□ 0.28
LRRC46-201ENST00000269025 UACAQ9BZF9 1416 aa16.79■□□□□ 0.28
LRRC46-201ENST00000269025 ATP10BO94823 1461 aa16.76■□□□□ 0.27
LRRC46-201ENST00000269025 NCOA2Q15596 1464 aa16.76■□□□□ 0.27
LRRC46-201ENST00000269025 PLEKHD1A6NEE1 506 aa16.74■□□□□ 0.27
LRRC46-201ENST00000269025 SUPT16HQ9Y5B9 1047 aaKnown RBP16.74■□□□□ 0.27
LRRC46-201ENST00000269025 SUPT6HQ7KZ85 1726 aaKnown RBP16.74■□□□□ 0.27
LRRC46-201ENST00000269025 ARHGEF11O15085 1522 aa16.72■□□□□ 0.27
LRRC46-201ENST00000269025 TROQ12816 1431 aaPredicted RBP16.72■□□□□ 0.27
LRRC46-201ENST00000269025 ABCC2Q92887 1545 aa16.71■□□□□ 0.27
LRRC46-201ENST00000269025 MYOM3Q5VTT5 1437 aa16.7■□□□□ 0.26
LRRC46-201ENST00000269025 UHRF1BP1LA0JNW5 1464 aa16.7■□□□□ 0.26
LRRC46-201ENST00000269025 FAM50AQ14320 339 aaKnown RBP16.69■□□□□ 0.26
LRRC46-201ENST00000269025 FGD6Q6ZV73 1430 aa16.69■□□□□ 0.26
LRRC46-201ENST00000269025 ITGAEP38570 1179 aa16.65■□□□□ 0.26
LRRC46-201ENST00000269025 KDM5BQ9UGL1 1544 aa16.63■□□□□ 0.25
LRRC46-201ENST00000269025 MIA2Q96PC5 1412 aa16.63■□□□□ 0.25
LRRC46-201ENST00000269025 PPP1R15AO75807 674 aaPredicted RBP16.63■□□□□ 0.25
LRRC46-201ENST00000269025 CCER2I3L3R5 266 aa16.61■□□□□ 0.25
LRRC46-201ENST00000269025 ADCY10Q96PN6 1610 aa16.6■□□□□ 0.25
LRRC46-201ENST00000269025 KIF14Q15058 1648 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms