RNA–Protein interactions for RNA: ENST00000268613.14

CDH13-201, Transcript of cadherin 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CDH13, Length 2,722 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-201ENST00000268613 AAMPQ13685 434 aa11.29□□□□□ -0.6
CDH13-201ENST00000268613 PHF23Q9BUL5 403 aaPredicted RBP11.29□□□□□ -0.6
CDH13-201ENST00000268613 RSF1Q96T23 1441 aaPredicted RBP11.27□□□□□ -0.6
CDH13-201ENST00000268613 KDM2AQ9Y2K7 1162 aa11.27□□□□□ -0.61
CDH13-201ENST00000268613 WIZO95785 1651 aa11.27□□□□□ -0.61
CDH13-201ENST00000268613 ZEB1P37275 1124 aaPredicted RBP11.27□□□□□ -0.61
CDH13-201ENST00000268613 LAMC3Q9Y6N6 1575 aa11.25□□□□□ -0.61
CDH13-201ENST00000268613 PRDM2Q13029 1718 aa11.24□□□□□ -0.61
CDH13-201ENST00000268613 RSPH4AQ5TD94 716 aa11.23□□□□□ -0.61
CDH13-201ENST00000268613 HSP90B1P14625 803 aaKnown RBP11.21□□□□□ -0.61
CDH13-201ENST00000268613 FBLN2P98095 1184 aa11.19□□□□□ -0.62
CDH13-201ENST00000268613 SLC4A1APQ9BWU0 796 aaKnown RBP11.19□□□□□ -0.62
CDH13-201ENST00000268613 RSPH6AQ9H0K4 717 aa11.19□□□□□ -0.62
CDH13-201ENST00000268613 POLR3GLQ9BT43 218 aa11.16□□□□□ -0.62
CDH13-201ENST00000268613 RBM10P98175 930 aaKnown RBP11.15□□□□□ -0.62
CDH13-201ENST00000268613 PCGF6Q9BYE7 350 aa11.15□□□□□ -0.63
CDH13-201ENST00000268613 ACIN1Q9UKV3 1341 aaKnown RBP11.13□□□□□ -0.63
CDH13-201ENST00000268613 NAP1L5Q96NT1 182 aaPredicted RBP11.11□□□□□ -0.63
CDH13-201ENST00000268613 VSIG10Q8N0Z9 540 aa11.11□□□□□ -0.63
CDH13-201ENST00000268613 BCCIPQ9P287 314 aaKnown RBP eCLIP11.1□□□□□ -0.63
CDH13-201ENST00000268613 CFTRP13569 1480 aa11.09□□□□□ -0.63
CDH13-201ENST00000268613 CUX2O14529 1486 aa11.08□□□□□ -0.64
CDH13-201ENST00000268613 CADPSQ9ULU8 1353 aa11.08□□□□□ -0.64
CDH13-201ENST00000268613 NEUROD1Q13562 356 aa11.07□□□□□ -0.64
CDH13-201ENST00000268613 PDS5BQ9NTI5 1447 aa11.06□□□□□ -0.64
CDH13-201ENST00000268613 THOC2Q8NI27 1593 aaKnown RBP11.06□□□□□ -0.64
CDH13-201ENST00000268613 BRPF3Q9ULD4 1205 aa11.05□□□□□ -0.64
CDH13-201ENST00000268613 DEKP35659 375 aaKnown RBP11.04□□□□□ -0.64
CDH13-201ENST00000268613 KIF21AQ7Z4S6 1674 aa11.03□□□□□ -0.64
CDH13-201ENST00000268613 ZNF326Q5BKZ1 582 aaKnown RBP11.03□□□□□ -0.64
CDH13-201ENST00000268613 CLSPNQ9HAW4 1339 aa11.02□□□□□ -0.65
CDH13-201ENST00000268613 CCDC88BA6NC98 1476 aa11.02□□□□□ -0.65
CDH13-201ENST00000268613 CCDC9Q9Y3X0 531 aaKnown RBP11.01□□□□□ -0.65
CDH13-201ENST00000268613 WDR62O43379 1518 aa11□□□□□ -0.65
CDH13-201ENST00000268613 ZBTB22O15209 634 aa11□□□□□ -0.65
CDH13-201ENST00000268613 ZMYND15Q9H091 742 aa10.99□□□□□ -0.65
CDH13-201ENST00000268613 ERICH6BQ5W0A0 696 aa10.99□□□□□ -0.65
CDH13-201ENST00000268613 NESP48681 1621 aa10.97□□□□□ -0.65
CDH13-201ENST00000268613 MRC2Q9UBG0 1479 aa10.97□□□□□ -0.65
CDH13-201ENST00000268613 ABCC8Q09428 1581 aa10.96□□□□□ -0.65
CDH13-201ENST00000268613 ERCC6Q03468 1493 aa10.96□□□□□ -0.65
CDH13-201ENST00000268613 PUS7Q96PZ0 661 aaKnown RBP10.96□□□□□ -0.66
CDH13-201ENST00000268613 CEP164Q9UPV0 1460 aa10.95□□□□□ -0.66
CDH13-201ENST00000268613 HMGB1P09429 215 aaKnown RBP10.94□□□□□ -0.66
CDH13-201ENST00000268613 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.94□□□□□ -0.66
CDH13-201ENST00000268613 ZFP91Q96JP5 570 aaPredicted RBP10.94□□□□□ -0.66
CDH13-201ENST00000268613 TMED8Q6PL24 325 aaPredicted RBP10.93□□□□□ -0.66
CDH13-201ENST00000268613 FANCD2Q9BXW9 1451 aa10.93□□□□□ -0.66
CDH13-201ENST00000268613 WDR97A6NE52 1622 aa10.92□□□□□ -0.66
CDH13-201ENST00000268613 ZNF592Q92610 1267 aa10.91□□□□□ -0.66
CDH13-201ENST00000268613 PRDM10Q9NQV6 1147 aa10.91□□□□□ -0.66
CDH13-201ENST00000268613 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.89□□□□□ -0.67
CDH13-201ENST00000268613 DNMBPQ6XZF7 1577 aa10.88□□□□□ -0.67
CDH13-201ENST00000268613 NECTIN2Q92692 538 aa10.87□□□□□ -0.67
CDH13-201ENST00000268613 NAP1L2Q9ULW6 460 aaPredicted RBP10.86□□□□□ -0.67
CDH13-201ENST00000268613 TICAM2Q86XR7 235 aa10.86□□□□□ -0.67
CDH13-201ENST00000268613 TRHP20396 242 aaPredicted RBP10.84□□□□□ -0.67
CDH13-201ENST00000268613 ARID3AQ99856 593 aa10.84□□□□□ -0.67
CDH13-201ENST00000268613 CNPY4Q8N129 248 aa10.84□□□□□ -0.67
CDH13-201ENST00000268613 ZNF428Q96B54 188 aa10.83□□□□□ -0.68
CDH13-201ENST00000268613 URB2Q14146 1524 aaKnown RBP10.82□□□□□ -0.68
CDH13-201ENST00000268613 FKBP8Q14318 412 aa10.82□□□□□ -0.68
CDH13-201ENST00000268613 BIVM-ERCC5R4GMW8 1640 aa10.81□□□□□ -0.68
CDH13-201ENST00000268613 GLIPR1L2Q4G1C9 344 aa10.8□□□□□ -0.68
CDH13-201ENST00000268613 TOPBP1Q92547 1522 aa10.8□□□□□ -0.68
CDH13-201ENST00000268613 MYT1LQ9UL68 1186 aa10.79□□□□□ -0.68
CDH13-201ENST00000268613 ZNF692Q9BU19 519 aaPredicted RBP10.78□□□□□ -0.68
CDH13-201ENST00000268613 IFT140Q96RY7 1462 aa10.78□□□□□ -0.68
CDH13-201ENST00000268613 NCLP19338 710 aaKnown RBP10.77□□□□□ -0.69
CDH13-201ENST00000268613 SECISBP2LQ93073 1101 aaKnown RBP10.77□□□□□ -0.69
CDH13-201ENST00000268613 CHMP4BQ9H444 224 aaKnown RBP10.76□□□□□ -0.69
CDH13-201ENST00000268613 TARBP1Q13395 1621 aaKnown RBP10.76□□□□□ -0.69
CDH13-201ENST00000268613 CWC22Q9HCG8 908 aaKnown RBP10.75□□□□□ -0.69
CDH13-201ENST00000268613 TOP2BQ02880 1626 aa10.74□□□□□ -0.69
CDH13-201ENST00000268613 CERS3Q8IU89 383 aa10.74□□□□□ -0.69
CDH13-201ENST00000268613 KCNG1Q9UIX4 513 aa10.71□□□□□ -0.69
CDH13-201ENST00000268613 CUX1P39880 1505 aa10.71□□□□□ -0.69
CDH13-201ENST00000268613 CHRM1P11229 460 aaPredicted RBP10.71□□□□□ -0.69
CDH13-201ENST00000268613 TEX2Q8IWB9 1127 aa10.71□□□□□ -0.69
CDH13-201ENST00000268613 CLSTN1O94985 981 aa10.7□□□□□ -0.7
CDH13-201ENST00000268613 PRDM16Q9HAZ2 1276 aa10.7□□□□□ -0.7
CDH13-201ENST00000268613 ZNF526Q8TF50 670 aaPredicted RBP10.69□□□□□ -0.7
CDH13-201ENST00000268613 PSMD1Q99460 953 aa10.69□□□□□ -0.7
CDH13-201ENST00000268613 POLA1P09884 1462 aaPredicted RBP10.67□□□□□ -0.7
CDH13-201ENST00000268613 IPO4Q8TEX9 1081 aaKnown RBP10.67□□□□□ -0.7
CDH13-201ENST00000268613 WWC1Q8IX03 1113 aa10.66□□□□□ -0.7
CDH13-201ENST00000268613 EIF4G3O43432 1585 aaKnown RBP10.65□□□□□ -0.7
CDH13-201ENST00000268613 ABCA10Q8WWZ4 1543 aa10.65□□□□□ -0.7
CDH13-201ENST00000268613 ABCA5Q8WWZ7 1642 aa10.65□□□□□ -0.7
CDH13-201ENST00000268613 FAM43BQ6ZT52 329 aaPredicted RBP10.65□□□□□ -0.7
CDH13-201ENST00000268613 C1orf115Q9H7X2 142 aa10.65□□□□□ -0.7
CDH13-201ENST00000268613 RNF216Q9NWF9 866 aaPredicted RBP10.65□□□□□ -0.7
CDH13-201ENST00000268613 FGD5Q6ZNL6 1462 aa10.64□□□□□ -0.71
CDH13-201ENST00000268613 ZBTB7CA1YPR0 619 aa10.63□□□□□ -0.71
CDH13-201ENST00000268613 WRNQ14191 1432 aaPredicted RBP eCLIP10.63□□□□□ -0.71
CDH13-201ENST00000268613 PBRM1Q86U86 1689 aa10.62□□□□□ -0.71
CDH13-201ENST00000268613 SYNJ1O43426 1573 aa10.62□□□□□ -0.71
CDH13-201ENST00000268613 BBXQ8WY36 941 aaPredicted RBP10.61□□□□□ -0.71
CDH13-201ENST00000268613 MAGI1Q96QZ7 1491 aaPredicted RBP10.59□□□□□ -0.71
CDH13-201ENST00000268613 PLCD4Q9BRC7 762 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms