RNA–Protein interactions for RNA: ENST00000268099.13

SCAMP2-201, Transcript of secretory carrier membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP2, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-201ENST00000268099 SETD5Q9C0A6 1442 aa21.72■■□□□ 1.07
SCAMP2-201ENST00000268099 ARHGAP35Q9NRY4 1499 aa21.72■■□□□ 1.07
SCAMP2-201ENST00000268099 ANP32CO43423 234 aa21.68■■□□□ 1.06
SCAMP2-201ENST00000268099 SIN3AQ96ST3 1273 aa21.68■■□□□ 1.06
SCAMP2-201ENST00000268099 FANCIQ9NVI1 1328 aa21.66■■□□□ 1.06
SCAMP2-201ENST00000268099 TIMELESSQ9UNS1 1208 aa21.64■■□□□ 1.05
SCAMP2-201ENST00000268099 TIAM1Q13009 1591 aa21.64■■□□□ 1.05
SCAMP2-201ENST00000268099 KIF27Q86VH2 1401 aa21.62■■□□□ 1.05
SCAMP2-201ENST00000268099 MAP3K1Q13233 1512 aa21.62■■□□□ 1.05
SCAMP2-201ENST00000268099 HIRIP3Q9BW71 556 aaPredicted RBP21.6■■□□□ 1.05
SCAMP2-201ENST00000268099 ERICH6Q7L0X2 663 aa21.56■■□□□ 1.04
SCAMP2-201ENST00000268099 CDK11AQ9UQ88 783 aaPredicted RBP21.56■■□□□ 1.04
SCAMP2-201ENST00000268099 CUX1P39880 1505 aa21.56■■□□□ 1.04
SCAMP2-201ENST00000268099 LRRC9Q6ZRR7 1453 aa21.53■■□□□ 1.04
SCAMP2-201ENST00000268099 PHLDB1Q86UU1 1377 aa21.53■■□□□ 1.04
SCAMP2-201ENST00000268099 FAM50AQ14320 339 aaKnown RBP21.49■■□□□ 1.03
SCAMP2-201ENST00000268099 MYT1LQ9UL68 1186 aa21.45■■□□□ 1.02
SCAMP2-201ENST00000268099 IRX6P78412 446 aaPredicted RBP21.45■■□□□ 1.02
SCAMP2-201ENST00000268099 CFAP43Q8NDM7 1665 aa21.45■■□□□ 1.02
SCAMP2-201ENST00000268099 HNRNPUQ00839 825 aaKnown RBP eCLIP21.44■■□□□ 1.02
SCAMP2-201ENST00000268099 TONSLQ96HA7 1378 aa21.4■■□□□ 1.02
SCAMP2-201ENST00000268099 ERICH6BQ5W0A0 696 aa21.39■■□□□ 1.02
SCAMP2-201ENST00000268099 PPP4R2Q9NY27 417 aa21.35■■□□□ 1.01
SCAMP2-201ENST00000268099 FHAD1B1AJZ9 1412 aa21.35■■□□□ 1.01
SCAMP2-201ENST00000268099 PCF11O94913 1555 aaKnown RBP21.34■■□□□ 1.01
SCAMP2-201ENST00000268099 DEKP35659 375 aaKnown RBP21.33■■□□□ 1
SCAMP2-201ENST00000268099 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.32■■□□□ 1
SCAMP2-201ENST00000268099 IGF1RP08069 1367 aa21.31■■□□□ 1
SCAMP2-201ENST00000268099 CCDC18Q5T9S5 1454 aa21.27■■□□□ 1
SCAMP2-201ENST00000268099 DNAJC5BQ9UF47 199 aa21.26■□□□□ 0.99
SCAMP2-201ENST00000268099 UACAQ9BZF9 1416 aa21.24■□□□□ 0.99
SCAMP2-201ENST00000268099 CARMIL1Q5VZK9 1371 aa21.24■□□□□ 0.99
SCAMP2-201ENST00000268099 HMGXB3Q12766 1538 aa21.23■□□□□ 0.99
SCAMP2-201ENST00000268099 CFTRP13569 1480 aa21.23■□□□□ 0.99
SCAMP2-201ENST00000268099 KDM5BQ9UGL1 1544 aa21.23■□□□□ 0.99
SCAMP2-201ENST00000268099 ATP1B4Q9UN42 357 aaPredicted RBP21.21■□□□□ 0.99
SCAMP2-201ENST00000268099 CC2D2AQ9P2K1 1620 aa21.21■□□□□ 0.99
SCAMP2-201ENST00000268099 FYCO1Q9BQS8 1478 aa21.2■□□□□ 0.98
SCAMP2-201ENST00000268099 P3H3Q8IVL6 736 aa21.2■□□□□ 0.98
SCAMP2-201ENST00000268099 WASHC2AQ641Q2 1341 aa21.2■□□□□ 0.98
SCAMP2-201ENST00000268099 PTPN23Q9H3S7 1636 aa21.2■□□□□ 0.98
SCAMP2-201ENST00000268099 B4GALNT3Q6L9W6 998 aa21.19■□□□□ 0.98
SCAMP2-201ENST00000268099 HFM1A2PYH4 1435 aa21.19■□□□□ 0.98
SCAMP2-201ENST00000268099 NOP58Q9Y2X3 529 aaKnown RBP21.19■□□□□ 0.98
SCAMP2-201ENST00000268099 FGD6Q6ZV73 1430 aa21.18■□□□□ 0.98
SCAMP2-201ENST00000268099 NCAPD3P42695 1498 aa21.17■□□□□ 0.98
SCAMP2-201ENST00000268099 NCOA2Q15596 1464 aa21.16■□□□□ 0.98
SCAMP2-201ENST00000268099 PRDM2Q13029 1718 aa21.16■□□□□ 0.98
SCAMP2-201ENST00000268099 FGD5Q6ZNL6 1462 aa21.14■□□□□ 0.97
SCAMP2-201ENST00000268099 CCDC184Q52MB2 194 aa21.14■□□□□ 0.97
SCAMP2-201ENST00000268099 FHOD3Q2V2M9 1422 aa21.13■□□□□ 0.97
SCAMP2-201ENST00000268099 CASKIN1Q8WXD9 1431 aa21.13■□□□□ 0.97
SCAMP2-201ENST00000268099 CNTLNQ9NXG0 1405 aa21.13■□□□□ 0.97
SCAMP2-201ENST00000268099 HSPA5P11021 654 aaKnown RBP21.13■□□□□ 0.97
SCAMP2-201ENST00000268099 PTPRKQ15262 1439 aa21.12■□□□□ 0.97
SCAMP2-201ENST00000268099 PRKCSHP14314 528 aaPredicted RBP21.12■□□□□ 0.97
SCAMP2-201ENST00000268099 AQRO60306 1485 aaKnown RBP eCLIP21.12■□□□□ 0.975e-7■■■□□ 17.7
SCAMP2-201ENST00000268099 ZBED9Q6R2W3 1325 aa21.11■□□□□ 0.97
SCAMP2-201ENST00000268099 NBR1Q14596 966 aa21.11■□□□□ 0.97
SCAMP2-201ENST00000268099 PAK3O75914 559 aaPredicted RBP21.1■□□□□ 0.97
SCAMP2-201ENST00000268099 NAIPQ13075 1403 aa21.09■□□□□ 0.97
SCAMP2-201ENST00000268099 EFCAB5A4FU69 1503 aa21.09■□□□□ 0.97
SCAMP2-201ENST00000268099 FAM9BQ8IZU0 186 aa21.07■□□□□ 0.96
SCAMP2-201ENST00000268099 PRKRIP1Q9H875 184 aaPredicted RBP21.05■□□□□ 0.96
SCAMP2-201ENST00000268099 EIF4G2P78344 907 aaKnown RBP eCLIP21.05■□□□□ 0.96
SCAMP2-201ENST00000268099 MRS2Q9HD23 443 aa21.04■□□□□ 0.96
SCAMP2-201ENST00000268099 FMN1Q68DA7 1419 aa21.03■□□□□ 0.96
SCAMP2-201ENST00000268099 MTUS2Q5JR59 1369 aa20.99■□□□□ 0.95
SCAMP2-201ENST00000268099 NCOA1Q15788 1441 aa20.99■□□□□ 0.95
SCAMP2-201ENST00000268099 CCDC7Q96M83 1385 aa20.99■□□□□ 0.95
SCAMP2-201ENST00000268099 HECW1Q76N89 1606 aa20.98■□□□□ 0.95
SCAMP2-201ENST00000268099 ANP32AP39687 249 aaKnown RBP20.97■□□□□ 0.95
SCAMP2-201ENST00000268099 IPO9Q96P70 1041 aaKnown RBP20.97■□□□□ 0.95
SCAMP2-201ENST00000268099 SNAPC4Q5SXM2 1469 aa20.96■□□□□ 0.95
SCAMP2-201ENST00000268099 MYOM3Q5VTT5 1437 aa20.96■□□□□ 0.95
SCAMP2-201ENST00000268099 CTTNBP2Q8WZ74 1663 aa20.96■□□□□ 0.95
SCAMP2-201ENST00000268099 C11orf95C9JLR9 678 aaPredicted RBP20.95■□□□□ 0.94
SCAMP2-201ENST00000268099 RTL5Q5HYW3 569 aaPredicted RBP20.95■□□□□ 0.94
SCAMP2-201ENST00000268099 DENND4BO75064 1496 aaPredicted RBP20.94■□□□□ 0.94
SCAMP2-201ENST00000268099 SMG6Q86US8 1419 aaKnown RBP20.94■□□□□ 0.94
SCAMP2-201ENST00000268099 GCC2Q8IWJ2 1684 aa20.93■□□□□ 0.94
SCAMP2-201ENST00000268099 LRRIQ1Q96JM4 1722 aa20.93■□□□□ 0.94
SCAMP2-201ENST00000268099 AKNAQ7Z591 1439 aa20.93■□□□□ 0.94
SCAMP2-201ENST00000268099 POLR1AO95602 1720 aaPredicted RBP20.91■□□□□ 0.94
SCAMP2-201ENST00000268099 SUPT6HQ7KZ85 1726 aaKnown RBP20.91■□□□□ 0.94
SCAMP2-201ENST00000268099 ZBTB47Q9UFB7 747 aaPredicted RBP20.9■□□□□ 0.94
SCAMP2-201ENST00000268099 CCDC136Q96JN2 1154 aa20.9■□□□□ 0.94
SCAMP2-201ENST00000268099 ABCA5Q8WWZ7 1642 aa20.89■□□□□ 0.94
SCAMP2-201ENST00000268099 RNF123Q5XPI4 1314 aa20.88■□□□□ 0.93
SCAMP2-201ENST00000268099 ANO8Q9HCE9 1232 aaPredicted RBP20.88■□□□□ 0.93
SCAMP2-201ENST00000268099 L3MBTL2Q969R5 705 aa20.86■□□□□ 0.93
SCAMP2-201ENST00000268099 RRP7BPQ9NSQ0 103 aa20.86■□□□□ 0.93
SCAMP2-201ENST00000268099 NUDCQ9Y266 331 aa20.85■□□□□ 0.93
SCAMP2-201ENST00000268099 CUL7Q14999 1698 aa20.85■□□□□ 0.93
SCAMP2-201ENST00000268099 CADPSQ9ULU8 1353 aa20.85■□□□□ 0.93
SCAMP2-201ENST00000268099 EHBP1L1Q8N3D4 1523 aa20.84■□□□□ 0.93
SCAMP2-201ENST00000268099 KDM6BO15054 1643 aa20.83■□□□□ 0.92
SCAMP2-201ENST00000268099 KIF7Q2M1P5 1343 aa20.82■□□□□ 0.92
SCAMP2-201ENST00000268099 UGGT2Q9NYU1 1516 aa20.82■□□□□ 0.92
SCAMP2-201ENST00000268099 THOC2Q8NI27 1593 aaKnown RBP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms