RNA–Protein interactions for RNA: ENST00000266735.9

SNRPF-201, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPF, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-201ENST00000266735 KIF21BO75037 1637 aa27.12■■□□□ 1.93
SNRPF-201ENST00000266735 JPH4Q96JJ6 628 aa27.08■■□□□ 1.93
SNRPF-201ENST00000266735 ARHGEF11O15085 1522 aa27.04■■□□□ 1.92
SNRPF-201ENST00000266735 GOLGA3Q08378 1498 aa27.04■■□□□ 1.92
SNRPF-201ENST00000266735 SHROOM2Q13796 1616 aa27.02■■□□□ 1.92
SNRPF-201ENST00000266735 IQGAP2Q13576 1575 aa27.02■■□□□ 1.92
SNRPF-201ENST00000266735 PRG4Q92954 1404 aaPredicted RBP26.98■■□□□ 1.91
SNRPF-201ENST00000266735 RIMBP3CA6NJZ7 1639 aa26.96■■□□□ 1.91
SNRPF-201ENST00000266735 RIMBP3BA6NNM3 1639 aa26.96■■□□□ 1.91
SNRPF-201ENST00000266735 RIMBP3Q9UFD9 1639 aa26.96■■□□□ 1.91
SNRPF-201ENST00000266735 EHMT2Q96KQ7 1210 aa26.95■■□□□ 1.9
SNRPF-201ENST00000266735 UBTFP17480 764 aaKnown RBP26.94■■□□□ 1.9
SNRPF-201ENST00000266735 CTTNBP2Q8WZ74 1663 aa26.93■■□□□ 1.9
SNRPF-201ENST00000266735 UGGT2Q9NYU1 1516 aa26.91■■□□□ 1.9
SNRPF-201ENST00000266735 CARMIL2Q6F5E8 1435 aa26.88■■□□□ 1.89
SNRPF-201ENST00000266735 ERCC6L2Q5T890 1561 aa26.88■■□□□ 1.89
SNRPF-201ENST00000266735 ARAP1Q96P48 1450 aa26.85■■□□□ 1.89
SNRPF-201ENST00000266735 DISP1Q96F81 1524 aa26.82■■□□□ 1.88
SNRPF-201ENST00000266735 CYB5RLQ6IPT4 315 aa26.8■■□□□ 1.88
SNRPF-201ENST00000266735 TNIKQ9UKE5 1360 aa26.77■■□□□ 1.88
SNRPF-201ENST00000266735 KIAA0556O60303 1618 aa26.75■■□□□ 1.87
SNRPF-201ENST00000266735 RANGAP1P46060 587 aaPredicted RBP26.73■■□□□ 1.87
SNRPF-201ENST00000266735 PTPRGP23470 1445 aa26.72■■□□□ 1.87
SNRPF-201ENST00000266735 SAMD9Q5K651 1589 aa26.69■■□□□ 1.86
SNRPF-201ENST00000266735 LOC105371045A0A1W2PR82 267 aa26.68■■□□□ 1.86
SNRPF-201ENST00000266735 EFCAB5A4FU69 1503 aa26.67■■□□□ 1.86
SNRPF-201ENST00000266735 TTBK1Q5TCY1 1321 aaPredicted RBP26.65■■□□□ 1.86
SNRPF-201ENST00000266735 P3H3Q8IVL6 736 aa26.65■■□□□ 1.86
SNRPF-201ENST00000266735 ARHGAP35Q9NRY4 1499 aa26.59■■□□□ 1.85
SNRPF-201ENST00000266735 FHOD3Q2V2M9 1422 aa26.58■■□□□ 1.85
SNRPF-201ENST00000266735 CLIP1P30622 1438 aa26.56■■□□□ 1.84
SNRPF-201ENST00000266735 UACAQ9BZF9 1416 aa26.55■■□□□ 1.84
SNRPF-201ENST00000266735 CEP162Q5TB80 1403 aa26.51■■□□□ 1.83
SNRPF-201ENST00000266735 UHRF1BP1LA0JNW5 1464 aa26.51■■□□□ 1.83
SNRPF-201ENST00000266735 PLB1Q6P1J6 1458 aa26.48■■□□□ 1.83
SNRPF-201ENST00000266735 ABCC2Q92887 1545 aa26.47■■□□□ 1.83
SNRPF-201ENST00000266735 ADCY10Q96PN6 1610 aa26.46■■□□□ 1.83
SNRPF-201ENST00000266735 FMN1Q68DA7 1419 aa26.46■■□□□ 1.83
SNRPF-201ENST00000266735 NPM1P06748 294 aaKnown RBP eCLIP26.45■■□□□ 1.82
SNRPF-201ENST00000266735 ABCA8O94911 1581 aa26.45■■□□□ 1.82
SNRPF-201ENST00000266735 KDM5BQ9UGL1 1544 aa26.36■■□□□ 1.81
SNRPF-201ENST00000266735 RAPGEF6Q8TEU7 1601 aa26.35■■□□□ 1.81
SNRPF-201ENST00000266735 NUP153P49790 1475 aaKnown RBP26.31■■□□□ 1.8
SNRPF-201ENST00000266735 MAPKBP1O60336 1514 aa26.29■■□□□ 1.8
SNRPF-201ENST00000266735 CASKIN1Q8WXD9 1431 aa26.27■■□□□ 1.8
SNRPF-201ENST00000266735 ATP10BO94823 1461 aa26.26■■□□□ 1.79
SNRPF-201ENST00000266735 ARID3CA6NKF2 412 aa26.25■■□□□ 1.79
SNRPF-201ENST00000266735 ATP1B4Q9UN42 357 aaPredicted RBP26.25■■□□□ 1.79
SNRPF-201ENST00000266735 ZCCHC11Q5TAX3 1644 aaKnown RBP26.24■■□□□ 1.79
SNRPF-201ENST00000266735 HECW1Q76N89 1606 aa26.23■■□□□ 1.79
SNRPF-201ENST00000266735 ASXL2Q76L83 1435 aa26.22■■□□□ 1.79
SNRPF-201ENST00000266735 FYCO1Q9BQS8 1478 aa26.21■■□□□ 1.79
SNRPF-201ENST00000266735 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.2■■□□□ 1.79
SNRPF-201ENST00000266735 HNRNPUL2Q1KMD3 747 aaKnown RBP26.2■■□□□ 1.79
SNRPF-201ENST00000266735 PCF11O94913 1555 aaKnown RBP26.2■■□□□ 1.78
SNRPF-201ENST00000266735 VPS8Q8N3P4 1428 aa26.18■■□□□ 1.78
SNRPF-201ENST00000266735 EPRSP07814 1512 aaKnown RBP26.17■■□□□ 1.78
SNRPF-201ENST00000266735 TRHP20396 242 aaPredicted RBP26.15■■□□□ 1.78
SNRPF-201ENST00000266735 WDR7Q9Y4E6 1490 aa26.15■■□□□ 1.78
SNRPF-201ENST00000266735 ABCC10Q5T3U5 1492 aa26.13■■□□□ 1.77
SNRPF-201ENST00000266735 CCDC18Q5T9S5 1454 aa26.13■■□□□ 1.77
SNRPF-201ENST00000266735 CDK13Q14004 1512 aaKnown RBP26.12■■□□□ 1.77
SNRPF-201ENST00000266735 PLEKHD1A6NEE1 506 aa26.11■■□□□ 1.77
SNRPF-201ENST00000266735 CDK11AQ9UQ88 783 aaPredicted RBP26.09■■□□□ 1.77
SNRPF-201ENST00000266735 FAM69CQ0P6D2 419 aa26.07■■□□□ 1.76
SNRPF-201ENST00000266735 DIP2BQ9P265 1576 aa26.05■■□□□ 1.76
SNRPF-201ENST00000266735 SENP3Q9H4L4 574 aaPredicted RBP26.04■■□□□ 1.76
SNRPF-201ENST00000266735 KCNH8Q96L42 1107 aa26.03■■□□□ 1.76
SNRPF-201ENST00000266735 GLI2P10070 1586 aa26■■□□□ 1.75
SNRPF-201ENST00000266735 TROQ12816 1431 aaPredicted RBP25.98■■□□□ 1.75
SNRPF-201ENST00000266735 LRRIQ1Q96JM4 1722 aa25.98■■□□□ 1.75
SNRPF-201ENST00000266735 KIF13AQ9H1H9 1805 aa25.91■■□□□ 1.74
SNRPF-201ENST00000266735 MAP3K1Q13233 1512 aa25.91■■□□□ 1.74
SNRPF-201ENST00000266735 APLP2Q06481 763 aa25.91■■□□□ 1.74
SNRPF-201ENST00000266735 MTUS2Q5JR59 1369 aa25.9■■□□□ 1.74
SNRPF-201ENST00000266735 MAGI3Q5TCQ9 1506 aa25.89■■□□□ 1.74
SNRPF-201ENST00000266735 TIAM1Q13009 1591 aa25.89■■□□□ 1.74
SNRPF-201ENST00000266735 CD109Q6YHK3 1445 aa25.88■■□□□ 1.73
SNRPF-201ENST00000266735 ABCA9Q8IUA7 1624 aa25.86■■□□□ 1.73
SNRPF-201ENST00000266735 CFAP43Q8NDM7 1665 aa25.85■■□□□ 1.73
SNRPF-201ENST00000266735 KIF14Q15058 1648 aa25.85■■□□□ 1.73
SNRPF-201ENST00000266735 MAP3K4Q9Y6R4 1608 aa25.85■■□□□ 1.73
SNRPF-201ENST00000266735 EHBP1L1Q8N3D4 1523 aa25.84■■□□□ 1.73
SNRPF-201ENST00000266735 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.84■■□□□ 1.736e-17■■□□□ 13.5
SNRPF-201ENST00000266735 LRRC9Q6ZRR7 1453 aa25.81■■□□□ 1.72
SNRPF-201ENST00000266735 TEX14Q8IWB6 1497 aa25.79■■□□□ 1.72
SNRPF-201ENST00000266735 KANK4Q5T7N3 995 aaPredicted RBP25.78■■□□□ 1.72
SNRPF-201ENST00000266735 TTC37Q6PGP7 1564 aa25.77■■□□□ 1.72
SNRPF-201ENST00000266735 PLCH2O75038 1416 aa25.74■■□□□ 1.71
SNRPF-201ENST00000266735 PPRC1Q5VV67 1664 aaKnown RBP25.71■■□□□ 1.71
SNRPF-201ENST00000266735 ARAP3Q8WWN8 1544 aa25.68■■□□□ 1.7
SNRPF-201ENST00000266735 CCNB3Q8WWL7 1395 aa25.68■■□□□ 1.7
SNRPF-201ENST00000266735 TSPOAP1O95153 1857 aa25.68■■□□□ 1.7
SNRPF-201ENST00000266735 NCOA2Q15596 1464 aa25.68■■□□□ 1.7
SNRPF-201ENST00000266735 PHLDB1Q86UU1 1377 aa25.67■■□□□ 1.7
SNRPF-201ENST00000266735 NEO1Q92859 1461 aa25.67■■□□□ 1.7
SNRPF-201ENST00000266735 FANCAO15360 1455 aa25.67■■□□□ 1.7
SNRPF-201ENST00000266735 EFCAB2Q5VUJ9 269 aa25.66■■□□□ 1.7
SNRPF-201ENST00000266735 SUPT6HQ7KZ85 1726 aaKnown RBP25.65■■□□□ 1.7
SNRPF-201ENST00000266735 GPATCH8Q9UKJ3 1502 aaKnown RBP25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms