RNA–Protein interactions for RNA: ENST00000264720.7

GTF3C2-201, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,882 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-201ENST00000264720 BCL11AQ9H165 835 aa16.17■□□□□ 0.18
GTF3C2-201ENST00000264720 ZEB1P37275 1124 aaPredicted RBP16.15■□□□□ 0.18
GTF3C2-201ENST00000264720 PBRM1Q86U86 1689 aa16.12■□□□□ 0.17
GTF3C2-201ENST00000264720 VPS8Q8N3P4 1428 aa16.12■□□□□ 0.17
GTF3C2-201ENST00000264720 GRIN2BQ13224 1484 aa16.12■□□□□ 0.17
GTF3C2-201ENST00000264720 AQRO60306 1485 aaKnown RBP eCLIP16.11■□□□□ 0.177e-7■■■■■ 28
GTF3C2-201ENST00000264720 APLP2Q06481 763 aa16.1■□□□□ 0.17
GTF3C2-201ENST00000264720 FHAD1B1AJZ9 1412 aa16.08■□□□□ 0.16
GTF3C2-201ENST00000264720 ZNF608Q9ULD9 1512 aaPredicted RBP16.06■□□□□ 0.16
GTF3C2-201ENST00000264720 CTTNBP2Q8WZ74 1663 aa16.05■□□□□ 0.16
GTF3C2-201ENST00000264720 ARAP1Q96P48 1450 aa16.03■□□□□ 0.16
GTF3C2-201ENST00000264720 ARHGAP35Q9NRY4 1499 aa16.03■□□□□ 0.16
GTF3C2-201ENST00000264720 EIF4G3O43432 1585 aaKnown RBP16.03■□□□□ 0.16
GTF3C2-201ENST00000264720 ADAMTS12P58397 1594 aa16.03■□□□□ 0.16
GTF3C2-201ENST00000264720 EFCAB5A4FU69 1503 aa15.99■□□□□ 0.15
GTF3C2-201ENST00000264720 SNAPC4Q5SXM2 1469 aa15.97■□□□□ 0.15
GTF3C2-201ENST00000264720 MAGI1Q96QZ7 1491 aaPredicted RBP15.97■□□□□ 0.15
GTF3C2-201ENST00000264720 TTBK1Q5TCY1 1321 aaPredicted RBP15.93■□□□□ 0.14
GTF3C2-201ENST00000264720 DIEXFQ68CQ4 756 aaKnown RBP15.92■□□□□ 0.14
GTF3C2-201ENST00000264720 CHMP7Q8WUX9 453 aaPredicted RBP15.92■□□□□ 0.14
GTF3C2-201ENST00000264720 P3H3Q8IVL6 736 aa15.91■□□□□ 0.14
GTF3C2-201ENST00000264720 SYNJ2O15056 1496 aa15.9■□□□□ 0.14
GTF3C2-201ENST00000264720 GRIN2AQ12879 1464 aa15.9■□□□□ 0.14
GTF3C2-201ENST00000264720 IQGAP2Q13576 1575 aa15.89■□□□□ 0.13
GTF3C2-201ENST00000264720 FHOD3Q2V2M9 1422 aa15.88■□□□□ 0.13
GTF3C2-201ENST00000264720 FMN1Q68DA7 1419 aa15.87■□□□□ 0.13
GTF3C2-201ENST00000264720 FBLN2P98095 1184 aa15.87■□□□□ 0.13
GTF3C2-201ENST00000264720 SAMD9Q5K651 1589 aa15.86■□□□□ 0.13
GTF3C2-201ENST00000264720 KIAA0586Q9BVV6 1533 aa15.86■□□□□ 0.13
GTF3C2-201ENST00000264720 PRKCSHP14314 528 aaPredicted RBP15.85■□□□□ 0.13
GTF3C2-201ENST00000264720 CCER1Q8TC90 406 aaPredicted RBP15.85■□□□□ 0.13
GTF3C2-201ENST00000264720 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.84■□□□□ 0.13
GTF3C2-201ENST00000264720 MAP3K1Q13233 1512 aa15.82■□□□□ 0.12
GTF3C2-201ENST00000264720 ATP1B4Q9UN42 357 aaPredicted RBP15.82■□□□□ 0.12
GTF3C2-201ENST00000264720 FYCO1Q9BQS8 1478 aa15.81■□□□□ 0.12
GTF3C2-201ENST00000264720 CASKIN1Q8WXD9 1431 aa15.81■□□□□ 0.12
GTF3C2-201ENST00000264720 UGGT2Q9NYU1 1516 aa15.8■□□□□ 0.12
GTF3C2-201ENST00000264720 PCF11O94913 1555 aaKnown RBP15.8■□□□□ 0.12
GTF3C2-201ENST00000264720 TIAM1Q13009 1591 aa15.78■□□□□ 0.12
GTF3C2-201ENST00000264720 NUP160Q12769 1436 aa15.76■□□□□ 0.11
GTF3C2-201ENST00000264720 KANK4Q5T7N3 995 aaPredicted RBP15.76■□□□□ 0.11
GTF3C2-201ENST00000264720 CEP170Q5SW79 1584 aa15.76■□□□□ 0.11
GTF3C2-201ENST00000264720 CFAP43Q8NDM7 1665 aa15.73■□□□□ 0.11
GTF3C2-201ENST00000264720 CARMIL2Q6F5E8 1435 aa15.72■□□□□ 0.11
GTF3C2-201ENST00000264720 LRRC9Q6ZRR7 1453 aa15.71■□□□□ 0.11
GTF3C2-201ENST00000264720 KIAA0556O60303 1618 aa15.71■□□□□ 0.1
GTF3C2-201ENST00000264720 JPH4Q96JJ6 628 aa15.7■□□□□ 0.1
GTF3C2-201ENST00000264720 ANP32EQ9BTT0 268 aa15.7■□□□□ 0.1
GTF3C2-201ENST00000264720 DISP1Q96F81 1524 aa15.68■□□□□ 0.1
GTF3C2-201ENST00000264720 CHD1O14646 1710 aa15.68■□□□□ 0.1
GTF3C2-201ENST00000264720 HECW1Q76N89 1606 aa15.68■□□□□ 0.1
GTF3C2-201ENST00000264720 CCDC18Q5T9S5 1454 aa15.67■□□□□ 0.1
GTF3C2-201ENST00000264720 MTUS2Q5JR59 1369 aa15.65■□□□□ 0.1
GTF3C2-201ENST00000264720 RRBP1Q9P2E9 1410 aaKnown RBP15.62■□□□□ 0.09
GTF3C2-201ENST00000264720 HNRNPUL2Q1KMD3 747 aaKnown RBP15.62■□□□□ 0.09
GTF3C2-201ENST00000264720 CCNB3Q8WWL7 1395 aa15.6■□□□□ 0.09
GTF3C2-201ENST00000264720 EPRSP07814 1512 aaKnown RBP15.58■□□□□ 0.09
GTF3C2-201ENST00000264720 EHBP1L1Q8N3D4 1523 aa15.58■□□□□ 0.09
GTF3C2-201ENST00000264720 RAPGEF6Q8TEU7 1601 aa15.58■□□□□ 0.09
GTF3C2-201ENST00000264720 LRRIQ1Q96JM4 1722 aa15.57■□□□□ 0.08
GTF3C2-201ENST00000264720 PRG4Q92954 1404 aaPredicted RBP15.57■□□□□ 0.08
GTF3C2-201ENST00000264720 CDK11AQ9UQ88 783 aaPredicted RBP15.57■□□□□ 0.08
GTF3C2-201ENST00000264720 SUPT6HQ7KZ85 1726 aaKnown RBP15.55■□□□□ 0.08
GTF3C2-201ENST00000264720 PHLDB1Q86UU1 1377 aa15.54■□□□□ 0.08
GTF3C2-201ENST00000264720 SHROOM2Q13796 1616 aa15.52■□□□□ 0.07
GTF3C2-201ENST00000264720 CDK13Q14004 1512 aaKnown RBP15.52■□□□□ 0.07
GTF3C2-201ENST00000264720 BCANQ96GW7 911 aa15.52■□□□□ 0.07
GTF3C2-201ENST00000264720 NUP153P49790 1475 aaKnown RBP15.52■□□□□ 0.07
GTF3C2-201ENST00000264720 PTPRGP23470 1445 aa15.51■□□□□ 0.07
GTF3C2-201ENST00000264720 FAM50AQ14320 339 aaKnown RBP15.51■□□□□ 0.07
GTF3C2-201ENST00000264720 ARID3CA6NKF2 412 aa15.51■□□□□ 0.07
GTF3C2-201ENST00000264720 NCOA2Q15596 1464 aa15.51■□□□□ 0.07
GTF3C2-201ENST00000264720 PLB1Q6P1J6 1458 aa15.5■□□□□ 0.07
GTF3C2-201ENST00000264720 CLASP1Q7Z460 1538 aa15.48■□□□□ 0.07
GTF3C2-201ENST00000264720 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.48■□□□□ 0.07
GTF3C2-201ENST00000264720 ITGAEP38570 1179 aa15.47■□□□□ 0.07
GTF3C2-201ENST00000264720 MYOM3Q5VTT5 1437 aa15.47■□□□□ 0.07
GTF3C2-201ENST00000264720 FGD6Q6ZV73 1430 aa15.47■□□□□ 0.07
GTF3C2-201ENST00000264720 ABCA8O94911 1581 aa15.47■□□□□ 0.07
GTF3C2-201ENST00000264720 MAGI3Q5TCQ9 1506 aa15.46■□□□□ 0.07
GTF3C2-201ENST00000264720 MIER1Q8N108 512 aa15.44■□□□□ 0.06
GTF3C2-201ENST00000264720 ARHGEF11O15085 1522 aa15.43■□□□□ 0.06
GTF3C2-201ENST00000264720 PLEKHD1A6NEE1 506 aa15.42■□□□□ 0.06
GTF3C2-201ENST00000264720 TROQ12816 1431 aaPredicted RBP15.42■□□□□ 0.06
GTF3C2-201ENST00000264720 UACAQ9BZF9 1416 aa15.41■□□□□ 0.06
GTF3C2-201ENST00000264720 OSCARQ8IYS5 282 aa15.4■□□□□ 0.06
GTF3C2-201ENST00000264720 ERICH6Q7L0X2 663 aa15.39■□□□□ 0.05
GTF3C2-201ENST00000264720 TSHZ2Q9NRE2 1034 aa15.39■□□□□ 0.05
GTF3C2-201ENST00000264720 MIA2Q96PC5 1412 aa15.39■□□□□ 0.05
GTF3C2-201ENST00000264720 ATP10BO94823 1461 aa15.38■□□□□ 0.05
GTF3C2-201ENST00000264720 PTPN23Q9H3S7 1636 aa15.37■□□□□ 0.05
GTF3C2-201ENST00000264720 ERCC6L2Q5T890 1561 aa15.36■□□□□ 0.05
GTF3C2-201ENST00000264720 ABCC2Q92887 1545 aa15.34■□□□□ 0.05
GTF3C2-201ENST00000264720 ADCY10Q96PN6 1610 aa15.34■□□□□ 0.05
GTF3C2-201ENST00000264720 SETD5Q9C0A6 1442 aa15.34■□□□□ 0.05
GTF3C2-201ENST00000264720 ZNF316A6NFI3 1004 aaPredicted RBP15.34■□□□□ 0.05
GTF3C2-201ENST00000264720 TCOF1Q13428 1488 aaKnown RBP15.34■□□□□ 0.05
GTF3C2-201ENST00000264720 SUPT16HQ9Y5B9 1047 aaKnown RBP15.33■□□□□ 0.04
GTF3C2-201ENST00000264720 KIF14Q15058 1648 aa15.32■□□□□ 0.04
GTF3C2-201ENST00000264720 ITSN2Q9NZM3 1697 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms