RNA–Protein interactions for RNA: ENST00000264331.8

TOP2B-201, Transcript of DNA topoisomerase II beta, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TOP2B, Length 5,358 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-201ENST00000264331 CDH23Q9H251 3354 aa9.78□□□□□ -0.84
TOP2B-201ENST00000264331 CCER1Q8TC90 406 aaPredicted RBP9.76□□□□□ -0.85
TOP2B-201ENST00000264331 FOXD1Q16676 465 aa9.74□□□□□ -0.85
TOP2B-201ENST00000264331 FHOD3Q2V2M9 1422 aa9.74□□□□□ -0.85
TOP2B-201ENST00000264331 KIF21AQ7Z4S6 1674 aa9.74□□□□□ -0.85
TOP2B-201ENST00000264331 POLA1P09884 1462 aaPredicted RBP9.74□□□□□ -0.85
TOP2B-201ENST00000264331 MAPKBP1O60336 1514 aa9.74□□□□□ -0.85
TOP2B-201ENST00000264331 CUX2O14529 1486 aa9.73□□□□□ -0.85
TOP2B-201ENST00000264331 PDS5BQ9NTI5 1447 aa9.72□□□□□ -0.85
TOP2B-201ENST00000264331 YTHDC1Q96MU7 727 aaKnown RBP9.72□□□□□ -0.85
TOP2B-201ENST00000264331 DHX57Q6P158 1386 aaKnown RBP9.72□□□□□ -0.85
TOP2B-201ENST00000264331 ZNF644Q9H582 1327 aaPredicted RBP9.71□□□□□ -0.85
TOP2B-201ENST00000264331 GOLGA3Q08378 1498 aa9.71□□□□□ -0.86
TOP2B-201ENST00000264331 VPS8Q8N3P4 1428 aa9.71□□□□□ -0.86
TOP2B-201ENST00000264331 MKI67P46013 3256 aaKnown RBP9.7□□□□□ -0.86
TOP2B-201ENST00000264331 CCDC184Q52MB2 194 aa9.7□□□□□ -0.86
TOP2B-201ENST00000264331 XIRP2A4UGR9 3374 aa9.69□□□□□ -0.86
TOP2B-201ENST00000264331 CADPSQ9ULU8 1353 aa9.67□□□□□ -0.86
TOP2B-201ENST00000264331 KDM5BQ9UGL1 1544 aa9.67□□□□□ -0.86
TOP2B-201ENST00000264331 C11orf95C9JLR9 678 aaPredicted RBP9.67□□□□□ -0.86
TOP2B-201ENST00000264331 FANCD2Q9BXW9 1451 aa9.66□□□□□ -0.86
TOP2B-201ENST00000264331 PCF11O94913 1555 aaKnown RBP9.65□□□□□ -0.87
TOP2B-201ENST00000264331 TOPBP1Q92547 1522 aa9.65□□□□□ -0.87
TOP2B-201ENST00000264331 WDR97A6NE52 1622 aa9.64□□□□□ -0.87
TOP2B-201ENST00000264331 HMGXB3Q12766 1538 aa9.64□□□□□ -0.87
TOP2B-201ENST00000264331 CEP164Q9UPV0 1460 aa9.63□□□□□ -0.87
TOP2B-201ENST00000264331 DNAH12Q6ZR08 3092 aa9.63□□□□□ -0.87
TOP2B-201ENST00000264331 DIEXFQ68CQ4 756 aaKnown RBP9.61□□□□□ -0.87
TOP2B-201ENST00000264331 CARMIL1Q5VZK9 1371 aa9.58□□□□□ -0.88
TOP2B-201ENST00000264331 CDK13Q14004 1512 aaKnown RBP9.58□□□□□ -0.88
TOP2B-201ENST00000264331 TARBP1Q13395 1621 aaKnown RBP9.58□□□□□ -0.88
TOP2B-201ENST00000264331 SNAPC4Q5SXM2 1469 aa9.57□□□□□ -0.88
TOP2B-201ENST00000264331 GTF3C3Q9Y5Q9 886 aa9.57□□□□□ -0.88
TOP2B-201ENST00000264331 ERCC6L2Q5T890 1561 aa9.57□□□□□ -0.88
TOP2B-201ENST00000264331 RAB3GAP2Q9H2M9 1393 aa9.57□□□□□ -0.88
TOP2B-201ENST00000264331 ATP1B4Q9UN42 357 aaPredicted RBP9.55□□□□□ -0.88
TOP2B-201ENST00000264331 CHIC2Q9UKJ5 165 aa9.54□□□□□ -0.88
TOP2B-201ENST00000264331 RRBP1Q9P2E9 1410 aaKnown RBP9.5□□□□□ -0.89
TOP2B-201ENST00000264331 MYO15AQ9UKN7 3530 aa9.5□□□□□ -0.89
TOP2B-201ENST00000264331 TIAM1Q13009 1591 aa9.5□□□□□ -0.89
TOP2B-201ENST00000264331 LRRC9Q6ZRR7 1453 aa9.49□□□□□ -0.89
TOP2B-201ENST00000264331 EYSQ5T1H1 3165 aa9.49□□□□□ -0.89
TOP2B-201ENST00000264331 PRDM2Q13029 1718 aa9.49□□□□□ -0.89
TOP2B-201ENST00000264331 ABCA5Q8WWZ7 1642 aa9.49□□□□□ -0.89
TOP2B-201ENST00000264331 UNC80Q8N2C7 3258 aa9.49□□□□□ -0.89
TOP2B-201ENST00000264331 LAMC3Q9Y6N6 1575 aa9.48□□□□□ -0.89
TOP2B-201ENST00000264331 SUPT6HQ7KZ85 1726 aaKnown RBP9.48□□□□□ -0.89
TOP2B-201ENST00000264331 KIF27Q86VH2 1401 aa9.48□□□□□ -0.89
TOP2B-201ENST00000264331 THOC2Q8NI27 1593 aaKnown RBP9.47□□□□□ -0.89
TOP2B-201ENST00000264331 RRP7BPQ9NSQ0 103 aa9.46□□□□□ -0.89
TOP2B-201ENST00000264331 ERICH3Q5RHP9 1530 aa9.46□□□□□ -0.89
TOP2B-201ENST00000264331 DNAH14Q0VDD8 3507 aa9.46□□□□□ -0.89
TOP2B-201ENST00000264331 ABCA10Q8WWZ4 1543 aa9.46□□□□□ -0.9
TOP2B-201ENST00000264331 ACIN1Q9UKV3 1341 aaKnown RBP9.46□□□□□ -0.9
TOP2B-201ENST00000264331 PLB1Q6P1J6 1458 aa9.45□□□□□ -0.9
TOP2B-201ENST00000264331 NBPF8Q3BBV2 869 aa9.45□□□□□ -0.9
TOP2B-201ENST00000264331 CCNB3Q8WWL7 1395 aa9.44□□□□□ -0.9
TOP2B-201ENST00000264331 SPEGQ15772 3267 aa9.44□□□□□ -0.9
TOP2B-201ENST00000264331 DISP1Q96F81 1524 aa9.43□□□□□ -0.9
TOP2B-201ENST00000264331 CNGB1Q14028 1251 aaPredicted RBP9.43□□□□□ -0.9
TOP2B-201ENST00000264331 FAM50AQ14320 339 aaKnown RBP9.43□□□□□ -0.9
TOP2B-201ENST00000264331 ZNF316A6NFI3 1004 aaPredicted RBP9.42□□□□□ -0.9
TOP2B-201ENST00000264331 KIF14Q15058 1648 aa9.41□□□□□ -0.9
TOP2B-201ENST00000264331 DNMBPQ6XZF7 1577 aa9.41□□□□□ -0.9
TOP2B-201ENST00000264331 DDX10Q13206 875 aaKnown RBP9.41□□□□□ -0.9
TOP2B-201ENST00000264331 SKAP1Q86WV1 359 aa9.4□□□□□ -0.9
TOP2B-201ENST00000264331 PRG4Q92954 1404 aaPredicted RBP9.4□□□□□ -0.9
TOP2B-201ENST00000264331 EEA1Q15075 1411 aa9.39□□□□□ -0.91
TOP2B-201ENST00000264331 NAIPQ13075 1403 aa9.39□□□□□ -0.91
TOP2B-201ENST00000264331 GAPVD1Q14C86 1478 aa9.38□□□□□ -0.91
TOP2B-201ENST00000264331 SAMD9Q5K651 1589 aa9.38□□□□□ -0.91
TOP2B-201ENST00000264331 GRIN2BQ13224 1484 aa9.38□□□□□ -0.91
TOP2B-201ENST00000264331 CEP170Q5SW79 1584 aa9.37□□□□□ -0.91
TOP2B-201ENST00000264331 PPP1R15AO75807 674 aaPredicted RBP9.36□□□□□ -0.91
TOP2B-201ENST00000264331 TRIM52Q96A61 297 aa9.36□□□□□ -0.91
TOP2B-201ENST00000264331 SENP3Q9H4L4 574 aaPredicted RBP9.36□□□□□ -0.91
TOP2B-201ENST00000264331 NUP153P49790 1475 aaKnown RBP9.35□□□□□ -0.91
TOP2B-201ENST00000264331 IRX6P78412 446 aaPredicted RBP9.35□□□□□ -0.91
TOP2B-201ENST00000264331 BCORL1Q5H9F3 1711 aa9.34□□□□□ -0.91
TOP2B-201ENST00000264331 CTTNBP2Q8WZ74 1663 aa9.34□□□□□ -0.91
TOP2B-201ENST00000264331 CFAP43Q8NDM7 1665 aa9.34□□□□□ -0.91
TOP2B-201ENST00000264331 SZT2Q5T011 3432 aa9.33□□□□□ -0.92
TOP2B-201ENST00000264331 PBRM1Q86U86 1689 aa9.33□□□□□ -0.92
TOP2B-201ENST00000264331 WASHC2AQ641Q2 1341 aa9.32□□□□□ -0.92
TOP2B-201ENST00000264331 NCOA2Q15596 1464 aa9.32□□□□□ -0.92
TOP2B-201ENST00000264331 ARHGEF11O15085 1522 aa9.32□□□□□ -0.92
TOP2B-201ENST00000264331 EIF4G3O43432 1585 aaKnown RBP9.32□□□□□ -0.92
TOP2B-201ENST00000264331 FBLN2P98095 1184 aa9.31□□□□□ -0.92
TOP2B-201ENST00000264331 BCANQ96GW7 911 aa9.31□□□□□ -0.92
TOP2B-201ENST00000264331 FGD6Q6ZV73 1430 aa9.3□□□□□ -0.92
TOP2B-201ENST00000264331 PTPN23Q9H3S7 1636 aa9.27□□□□□ -0.92
TOP2B-201ENST00000264331 EPRSP07814 1512 aaKnown RBP9.26□□□□□ -0.93
TOP2B-201ENST00000264331 ARHGEF12Q9NZN5 1544 aa9.26□□□□□ -0.93
TOP2B-201ENST00000264331 CFAP65Q6ZU64 1925 aaKnown RBP9.26□□□□□ -0.93
TOP2B-201ENST00000264331 ADAMTS12P58397 1594 aa9.25□□□□□ -0.93
TOP2B-201ENST00000264331 L3MBTL2Q969R5 705 aa9.25□□□□□ -0.93
TOP2B-201ENST00000264331 CASKIN1Q8WXD9 1431 aa9.25□□□□□ -0.93
TOP2B-201ENST00000264331 UGGT2Q9NYU1 1516 aa9.24□□□□□ -0.93
TOP2B-201ENST00000264331 WDR62O43379 1518 aa9.23□□□□□ -0.93
TOP2B-201ENST00000264331 SUPT16HQ9Y5B9 1047 aaKnown RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms