RNA–Protein interactions for RNA: ENST00000262659.12

CCM2L-201, Transcript of CCM2 like scaffold protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCM2L, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2L-201ENST00000262659 HIRIP3Q9BW71 556 aaPredicted RBP33.19■■■□□ 2.9
CCM2L-201ENST00000262659 RRBP1Q9P2E9 1410 aaKnown RBP33.18■■■□□ 2.9
CCM2L-201ENST00000262659 RAPGEF2Q9Y4G8 1499 aa33.17■■■□□ 2.9
CCM2L-201ENST00000262659 IL27Q8NEV9 243 aa33.13■■■□□ 2.89
CCM2L-201ENST00000262659 PPP4R2Q9NY27 417 aa33.1■■■□□ 2.89
CCM2L-201ENST00000262659 HNRNPUQ00839 825 aaKnown RBP eCLIP33.08■■■□□ 2.89
CCM2L-201ENST00000262659 RAB3GAP2Q9H2M9 1393 aa33.06■■■□□ 2.88
CCM2L-201ENST00000262659 SIN3AQ96ST3 1273 aa33.04■■■□□ 2.88
CCM2L-201ENST00000262659 RTN4Q9NQC3 1192 aaKnown RBP33.04■■■□□ 2.88
CCM2L-201ENST00000262659 CCNB3Q8WWL7 1395 aa33.02■■■□□ 2.88
CCM2L-201ENST00000262659 UBE2Q2Q8WVN8 375 aa33■■■□□ 2.87
CCM2L-201ENST00000262659 ZBTB4Q9P1Z0 1013 aaPredicted RBP33■■■□□ 2.87
CCM2L-201ENST00000262659 B4GALNT3Q6L9W6 998 aa32.98■■■□□ 2.87
CCM2L-201ENST00000262659 UNC13AQ9UPW8 1703 aa32.97■■■□□ 2.87
CCM2L-201ENST00000262659 RTL5Q5HYW3 569 aaPredicted RBP32.96■■■□□ 2.87
CCM2L-201ENST00000262659 SYNJ1O43426 1573 aa32.93■■■□□ 2.86
CCM2L-201ENST00000262659 ARAP1Q96P48 1450 aa32.92■■■□□ 2.86
CCM2L-201ENST00000262659 IPO9Q96P70 1041 aaKnown RBP32.8■■■□□ 2.84
CCM2L-201ENST00000262659 SETD5Q9C0A6 1442 aa32.76■■■□□ 2.83
CCM2L-201ENST00000262659 TIMELESSQ9UNS1 1208 aa32.75■■■□□ 2.83
CCM2L-201ENST00000262659 ANP32AP39687 249 aaKnown RBP32.73■■■□□ 2.83
CCM2L-201ENST00000262659 ZBTB47Q9UFB7 747 aaPredicted RBP32.73■■■□□ 2.83
CCM2L-201ENST00000262659 WASHC2AQ641Q2 1341 aa32.66■■■□□ 2.82
CCM2L-201ENST00000262659 PABPN1Q86U42 306 aaKnown RBP eCLIP32.66■■■□□ 2.82
CCM2L-201ENST00000262659 PEG3Q9GZU2 1588 aa32.53■■■□□ 2.8
CCM2L-201ENST00000262659 BICRAQ9NZM4 1560 aa32.52■■■□□ 2.8
CCM2L-201ENST00000262659 CCDC184Q52MB2 194 aa32.52■■■□□ 2.8
CCM2L-201ENST00000262659 ERICH3Q5RHP9 1530 aa32.49■■■□□ 2.79
CCM2L-201ENST00000262659 C11orf95C9JLR9 678 aaPredicted RBP32.48■■■□□ 2.79
CCM2L-201ENST00000262659 PRXQ9BXM0 1461 aa32.45■■■□□ 2.79
CCM2L-201ENST00000262659 NEFMP07197 916 aa32.45■■■□□ 2.78
CCM2L-201ENST00000262659 WASHC2CQ9Y4E1 1318 aa32.44■■■□□ 2.78
CCM2L-201ENST00000262659 EIF5BO60841 1220 aaKnown RBP32.44■■■□□ 2.78
CCM2L-201ENST00000262659 TONSLQ96HA7 1378 aa32.42■■■□□ 2.78
CCM2L-201ENST00000262659 FAM9BQ8IZU0 186 aa32.41■■■□□ 2.78
CCM2L-201ENST00000262659 LAS1LQ9Y4W2 734 aaKnown RBP32.41■■■□□ 2.78
CCM2L-201ENST00000262659 ZBED9Q6R2W3 1325 aa32.4■■■□□ 2.78
CCM2L-201ENST00000262659 FAM50AQ14320 339 aaKnown RBP32.39■■■□□ 2.78
CCM2L-201ENST00000262659 BRPF3Q9ULD4 1205 aa32.38■■■□□ 2.77
CCM2L-201ENST00000262659 USP35Q9P2H5 1018 aa32.38■■■□□ 2.77
CCM2L-201ENST00000262659 ARHGAP35Q9NRY4 1499 aa32.33■■■□□ 2.77
CCM2L-201ENST00000262659 PHLDB1Q86UU1 1377 aa32.31■■■□□ 2.76
CCM2L-201ENST00000262659 ATAD2BQ9ULI0 1458 aa32.3■■■□□ 2.76
CCM2L-201ENST00000262659 NPM2Q86SE8 214 aaKnown RBP32.3■■■□□ 2.76
CCM2L-201ENST00000262659 NCAPD3P42695 1498 aa32.28■■■□□ 2.76
CCM2L-201ENST00000262659 AKNAQ7Z591 1439 aa32.27■■■□□ 2.76
CCM2L-201ENST00000262659 FHAD1B1AJZ9 1412 aa32.25■■■□□ 2.75
CCM2L-201ENST00000262659 MRS2Q9HD23 443 aa32.24■■■□□ 2.75
CCM2L-201ENST00000262659 TIAM1Q13009 1591 aa32.24■■■□□ 2.75
CCM2L-201ENST00000262659 TOP2BQ02880 1626 aa32.21■■■□□ 2.75
CCM2L-201ENST00000262659 PRKRIP1Q9H875 184 aaPredicted RBP32.19■■■□□ 2.74
CCM2L-201ENST00000262659 HSPA5P11021 654 aaKnown RBP32.17■■■□□ 2.74
CCM2L-201ENST00000262659 LRRC9Q6ZRR7 1453 aa32.15■■■□□ 2.74
CCM2L-201ENST00000262659 CNTLNQ9NXG0 1405 aa32.15■■■□□ 2.74
CCM2L-201ENST00000262659 PPM1GO15355 546 aaPredicted RBP32.15■■■□□ 2.74
CCM2L-201ENST00000262659 SMG6Q86US8 1419 aaKnown RBP32.13■■■□□ 2.73
CCM2L-201ENST00000262659 RNF123Q5XPI4 1314 aa32.12■■■□□ 2.73
CCM2L-201ENST00000262659 GSE1Q14687 1217 aa32.12■■■□□ 2.73
CCM2L-201ENST00000262659 PKNOX2Q96KN3 472 aa32.12■■■□□ 2.73
CCM2L-201ENST00000262659 MAP3K1Q13233 1512 aa32.11■■■□□ 2.73
CCM2L-201ENST00000262659 NCOA2Q15596 1464 aa32.11■■■□□ 2.73
CCM2L-201ENST00000262659 KDM5BQ9UGL1 1544 aa32.08■■■□□ 2.73
CCM2L-201ENST00000262659 NUDCQ9Y266 331 aa32.04■■■□□ 2.72
CCM2L-201ENST00000262659 PDE4AP27815 886 aa32■■■□□ 2.71
CCM2L-201ENST00000262659 RSPH6AQ9H0K4 717 aa31.99■■■□□ 2.71
CCM2L-201ENST00000262659 BIVM-ERCC5R4GMW8 1640 aa31.99■■■□□ 2.71
CCM2L-201ENST00000262659 FRAT1Q92837 279 aaPredicted RBP31.97■■■□□ 2.71
CCM2L-201ENST00000262659 EIF4G2P78344 907 aaKnown RBP eCLIP31.95■■■□□ 2.71
CCM2L-201ENST00000262659 TCERG1O14776 1098 aaKnown RBP31.94■■■□□ 2.7
CCM2L-201ENST00000262659 CCDC18Q5T9S5 1454 aa31.94■■■□□ 2.7
CCM2L-201ENST00000262659 BACH2Q9BYV9 841 aa31.93■■■□□ 2.7
CCM2L-201ENST00000262659 UACAQ9BZF9 1416 aa31.92■■■□□ 2.7
CCM2L-201ENST00000262659 NFKBIBQ15653 356 aa31.9■■■□□ 2.7
CCM2L-201ENST00000262659 CCDC7Q96M83 1385 aa31.89■■■□□ 2.69
CCM2L-201ENST00000262659 KIF27Q86VH2 1401 aa31.87■■■□□ 2.69
CCM2L-201ENST00000262659 SENP3-EIF4A1A0A087X0R7 540 aa31.86■■■□□ 2.69
CCM2L-201ENST00000262659 NCOA1Q15788 1441 aa31.84■■■□□ 2.69
CCM2L-201ENST00000262659 FAM43AQ8N2R8 423 aa31.83■■■□□ 2.69
CCM2L-201ENST00000262659 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.8■■■□□ 2.68
CCM2L-201ENST00000262659 AQRO60306 1485 aaKnown RBP eCLIP31.79■■■□□ 2.68
CCM2L-201ENST00000262659 CFAP43Q8NDM7 1665 aa31.78■■■□□ 2.68
CCM2L-201ENST00000262659 CUX1P39880 1505 aa31.77■■■□□ 2.68
CCM2L-201ENST00000262659 MS4A1P11836 297 aa31.77■■■□□ 2.68
CCM2L-201ENST00000262659 EXOC6Q8TAG9 804 aa31.76■■■□□ 2.68
CCM2L-201ENST00000262659 ATP1B4Q9UN42 357 aaPredicted RBP31.76■■■□□ 2.67
CCM2L-201ENST00000262659 DDRGK1Q96HY6 314 aa31.75■■■□□ 2.67
CCM2L-201ENST00000262659 HFM1A2PYH4 1435 aa31.74■■■□□ 2.67
CCM2L-201ENST00000262659 DCAF11Q8TEB1 546 aa31.73■■■□□ 2.67
CCM2L-201ENST00000262659 SLC4A3P48751 1232 aa31.72■■■□□ 2.67
CCM2L-201ENST00000262659 PTPN23Q9H3S7 1636 aa31.72■■■□□ 2.67
CCM2L-201ENST00000262659 PTPRKQ15262 1439 aa31.71■■■□□ 2.67
CCM2L-201ENST00000262659 CNGB1Q14028 1251 aaPredicted RBP31.7■■■□□ 2.67
CCM2L-201ENST00000262659 PCF11O94913 1555 aaKnown RBP31.66■■■□□ 2.66
CCM2L-201ENST00000262659 KIF7Q2M1P5 1343 aa31.66■■■□□ 2.66
CCM2L-201ENST00000262659 RRP1P56182 461 aaKnown RBP31.66■■■□□ 2.66
CCM2L-201ENST00000262659 GLIPR1L2Q4G1C9 344 aa31.65■■■□□ 2.66
CCM2L-201ENST00000262659 NAIPQ13075 1403 aa31.63■■■□□ 2.65
CCM2L-201ENST00000262659 FGD6Q6ZV73 1430 aa31.63■■■□□ 2.65
CCM2L-201ENST00000262659 ZMYND15Q9H091 742 aa31.63■■■□□ 2.65
CCM2L-201ENST00000262659 P3H3Q8IVL6 736 aa31.61■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms