RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 ARHGAP35Q9NRY4 1499 aa20.49■□□□□ 0.87
VAMP7-201ENST00000262640 VPS8Q8N3P4 1428 aa20.48■□□□□ 0.87
VAMP7-201ENST00000262640 ARAP1Q96P48 1450 aa20.47■□□□□ 0.87
VAMP7-201ENST00000262640 CHMP7Q8WUX9 453 aaPredicted RBP20.46■□□□□ 0.87
VAMP7-201ENST00000262640 EFCAB5A4FU69 1503 aa20.44■□□□□ 0.86
VAMP7-201ENST00000262640 IQGAP2Q13576 1575 aa20.4■□□□□ 0.86
VAMP7-201ENST00000262640 KIAA0586Q9BVV6 1533 aa20.39■□□□□ 0.85
VAMP7-201ENST00000262640 FBLN2P98095 1184 aa20.38■□□□□ 0.85
VAMP7-201ENST00000262640 NUP160Q12769 1436 aa20.36■□□□□ 0.85
VAMP7-201ENST00000262640 SAMD9Q5K651 1589 aa20.36■□□□□ 0.85
VAMP7-201ENST00000262640 CEP170Q5SW79 1584 aa20.35■□□□□ 0.85
VAMP7-201ENST00000262640 UGGT2Q9NYU1 1516 aa20.32■□□□□ 0.84
VAMP7-201ENST00000262640 FHOD3Q2V2M9 1422 aa20.31■□□□□ 0.84
VAMP7-201ENST00000262640 P3H3Q8IVL6 736 aa20.3■□□□□ 0.84
VAMP7-201ENST00000262640 APLP2Q06481 763 aa20.28■□□□□ 0.84
VAMP7-201ENST00000262640 CHD1O14646 1710 aa20.27■□□□□ 0.84
VAMP7-201ENST00000262640 FMN1Q68DA7 1419 aa20.25■□□□□ 0.83
VAMP7-201ENST00000262640 TRIM26Q12899 539 aaPredicted RBP20.24■□□□□ 0.83
VAMP7-201ENST00000262640 PPARGC1BQ86YN6 1023 aaKnown RBP20.24■□□□□ 0.83
VAMP7-201ENST00000262640 DISP1Q96F81 1524 aa20.2■□□□□ 0.82
VAMP7-201ENST00000262640 KIAA0556O60303 1618 aa20.2■□□□□ 0.82
VAMP7-201ENST00000262640 FYCO1Q9BQS8 1478 aa20.19■□□□□ 0.82
VAMP7-201ENST00000262640 CASKIN1Q8WXD9 1431 aa20.19■□□□□ 0.82
VAMP7-201ENST00000262640 PCF11O94913 1555 aaKnown RBP20.19■□□□□ 0.82
VAMP7-201ENST00000262640 JPH4Q96JJ6 628 aa20.18■□□□□ 0.82
VAMP7-201ENST00000262640 MAP3K1Q13233 1512 aa20.17■□□□□ 0.82
VAMP7-201ENST00000262640 PCGF6Q9BYE7 350 aa20.16■□□□□ 0.82
VAMP7-201ENST00000262640 CARMIL2Q6F5E8 1435 aa20.15■□□□□ 0.82
VAMP7-201ENST00000262640 TIAM1Q13009 1591 aa20.11■□□□□ 0.81
VAMP7-201ENST00000262640 TTBK1Q5TCY1 1321 aaPredicted RBP20.1■□□□□ 0.81
VAMP7-201ENST00000262640 ATP1B4Q9UN42 357 aaPredicted RBP20.08■□□□□ 0.81
VAMP7-201ENST00000262640 CLASP1Q7Z460 1538 aa20.08■□□□□ 0.8
VAMP7-201ENST00000262640 CFAP43Q8NDM7 1665 aa20.08■□□□□ 0.8
VAMP7-201ENST00000262640 SHROOM2Q13796 1616 aa20.08■□□□□ 0.8
VAMP7-201ENST00000262640 PRG4Q92954 1404 aaPredicted RBP20.06■□□□□ 0.8
VAMP7-201ENST00000262640 KANK4Q5T7N3 995 aaPredicted RBP20.06■□□□□ 0.8
VAMP7-201ENST00000262640 HECW1Q76N89 1606 aa20.04■□□□□ 0.8
VAMP7-201ENST00000262640 LRRC9Q6ZRR7 1453 aa20.02■□□□□ 0.8
VAMP7-201ENST00000262640 CCDC18Q5T9S5 1454 aa20.01■□□□□ 0.79
VAMP7-201ENST00000262640 RAPGEF6Q8TEU7 1601 aa19.98■□□□□ 0.79
VAMP7-201ENST00000262640 LRRIQ1Q96JM4 1722 aa19.97■□□□□ 0.79
VAMP7-201ENST00000262640 EPRSP07814 1512 aaKnown RBP19.96■□□□□ 0.79
VAMP7-201ENST00000262640 PTPRGP23470 1445 aa19.94■□□□□ 0.78
VAMP7-201ENST00000262640 NUP153P49790 1475 aaKnown RBP19.93■□□□□ 0.78
VAMP7-201ENST00000262640 PLB1Q6P1J6 1458 aa19.93■□□□□ 0.78
VAMP7-201ENST00000262640 OSCARQ8IYS5 282 aa19.93■□□□□ 0.78
VAMP7-201ENST00000262640 MTUS2Q5JR59 1369 aa19.91■□□□□ 0.78
VAMP7-201ENST00000262640 ABCA8O94911 1581 aa19.91■□□□□ 0.78
VAMP7-201ENST00000262640 ERCC6L2Q5T890 1561 aa19.9■□□□□ 0.78
VAMP7-201ENST00000262640 EHBP1L1Q8N3D4 1523 aa19.89■□□□□ 0.78
VAMP7-201ENST00000262640 CDK13Q14004 1512 aaKnown RBP19.89■□□□□ 0.77
VAMP7-201ENST00000262640 RRBP1Q9P2E9 1410 aaKnown RBP19.85■□□□□ 0.77
VAMP7-201ENST00000262640 MAGI3Q5TCQ9 1506 aa19.84■□□□□ 0.77
VAMP7-201ENST00000262640 UACAQ9BZF9 1416 aa19.83■□□□□ 0.76
VAMP7-201ENST00000262640 ARID3CA6NKF2 412 aa19.83■□□□□ 0.76
VAMP7-201ENST00000262640 CDK11AQ9UQ88 783 aaPredicted RBP19.82■□□□□ 0.76
VAMP7-201ENST00000262640 PHLDB1Q86UU1 1377 aa19.82■□□□□ 0.76
VAMP7-201ENST00000262640 SUPT6HQ7KZ85 1726 aaKnown RBP19.81■□□□□ 0.76
VAMP7-201ENST00000262640 CCNB3Q8WWL7 1395 aa19.8■□□□□ 0.76
VAMP7-201ENST00000262640 NCOA2Q15596 1464 aa19.79■□□□□ 0.76
VAMP7-201ENST00000262640 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.79■□□□□ 0.76
VAMP7-201ENST00000262640 HNRNPUL2Q1KMD3 747 aaKnown RBP19.79■□□□□ 0.76
VAMP7-201ENST00000262640 ATP10BO94823 1461 aa19.77■□□□□ 0.76
VAMP7-201ENST00000262640 ARHGEF11O15085 1522 aa19.77■□□□□ 0.76
VAMP7-201ENST00000262640 ABCC2Q92887 1545 aa19.77■□□□□ 0.76
VAMP7-201ENST00000262640 TROQ12816 1431 aaPredicted RBP19.75■□□□□ 0.75
VAMP7-201ENST00000262640 UHRF1BP1LA0JNW5 1464 aa19.74■□□□□ 0.75
VAMP7-201ENST00000262640 MYOM3Q5VTT5 1437 aa19.72■□□□□ 0.75
VAMP7-201ENST00000262640 FGD6Q6ZV73 1430 aa19.71■□□□□ 0.75
VAMP7-201ENST00000262640 PLEKHD1A6NEE1 506 aa19.69■□□□□ 0.74
VAMP7-201ENST00000262640 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.69■□□□□ 0.74
VAMP7-201ENST00000262640 ADCY10Q96PN6 1610 aa19.68■□□□□ 0.74
VAMP7-201ENST00000262640 KDM5BQ9UGL1 1544 aa19.65■□□□□ 0.74
VAMP7-201ENST00000262640 FAM50AQ14320 339 aaKnown RBP19.64■□□□□ 0.74
VAMP7-201ENST00000262640 MIA2Q96PC5 1412 aa19.64■□□□□ 0.73
VAMP7-201ENST00000262640 KIF14Q15058 1648 aa19.63■□□□□ 0.73
VAMP7-201ENST00000262640 ZCCHC11Q5TAX3 1644 aaKnown RBP19.61■□□□□ 0.73
VAMP7-201ENST00000262640 PTPN23Q9H3S7 1636 aa19.6■□□□□ 0.73
VAMP7-201ENST00000262640 TCOF1Q13428 1488 aaKnown RBP19.6■□□□□ 0.73
VAMP7-201ENST00000262640 ABCC10Q5T3U5 1492 aa19.57■□□□□ 0.72
VAMP7-201ENST00000262640 ITSN2Q9NZM3 1697 aa19.56■□□□□ 0.72
VAMP7-201ENST00000262640 ITGAEP38570 1179 aa19.56■□□□□ 0.72
VAMP7-201ENST00000262640 GPATCH8Q9UKJ3 1502 aaKnown RBP19.55■□□□□ 0.72
VAMP7-201ENST00000262640 HRCP23327 699 aa19.51■□□□□ 0.71
VAMP7-201ENST00000262640 CFDP1Q9UEE9 299 aaPredicted RBP19.5■□□□□ 0.71
VAMP7-201ENST00000262640 RIMBP3CA6NJZ7 1639 aa19.48■□□□□ 0.71
VAMP7-201ENST00000262640 RIMBP3BA6NNM3 1639 aa19.48■□□□□ 0.71
VAMP7-201ENST00000262640 RIMBP3Q9UFD9 1639 aa19.48■□□□□ 0.71
VAMP7-201ENST00000262640 CDC42BPAQ5VT25 1732 aa19.48■□□□□ 0.71
VAMP7-201ENST00000262640 WDR7Q9Y4E6 1490 aa19.47■□□□□ 0.71
VAMP7-201ENST00000262640 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.47■□□□□ 0.71
VAMP7-201ENST00000262640 NPM1P06748 294 aaKnown RBP eCLIP19.47■□□□□ 0.71
VAMP7-201ENST00000262640 CAMSAP2Q08AD1 1489 aa19.45■□□□□ 0.7
VAMP7-201ENST00000262640 TTC37Q6PGP7 1564 aa19.45■□□□□ 0.7
VAMP7-201ENST00000262640 PTPRKQ15262 1439 aa19.44■□□□□ 0.7
VAMP7-201ENST00000262640 KCNH8Q96L42 1107 aa19.44■□□□□ 0.7
VAMP7-201ENST00000262640 PREX2Q70Z35 1606 aa19.44■□□□□ 0.7
VAMP7-201ENST00000262640 CCER1Q8TC90 406 aaPredicted RBP19.44■□□□□ 0.7
VAMP7-201ENST00000262640 SETD5Q9C0A6 1442 aa19.43■□□□□ 0.7
VAMP7-201ENST00000262640 ZNF644Q9H582 1327 aaPredicted RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms