RNA–Protein interactions for RNA: ENST00000262631.10

SCN1B-201, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-201ENST00000262631 OSCARQ8IYS5 282 aa39.67■■■■□ 3.94
SCN1B-201ENST00000262631 KIAA0586Q9BVV6 1533 aa39.6■■■■□ 3.93
SCN1B-201ENST00000262631 CTTNBP2Q8WZ74 1663 aa39.56■■■■□ 3.92
SCN1B-201ENST00000262631 CLASP1Q7Z460 1538 aa39.55■■■■□ 3.92
SCN1B-201ENST00000262631 TNIKQ9UKE5 1360 aa39.55■■■■□ 3.92
SCN1B-201ENST00000262631 IQGAP2Q13576 1575 aa39.5■■■■□ 3.91
SCN1B-201ENST00000262631 RANGAP1P46060 587 aaPredicted RBP39.43■■■■□ 3.9
SCN1B-201ENST00000262631 JPH4Q96JJ6 628 aa39.41■■■■□ 3.9
SCN1B-201ENST00000262631 UGGT2Q9NYU1 1516 aa39.32■■■■□ 3.89
SCN1B-201ENST00000262631 SHROOM2Q13796 1616 aa39.32■■■■□ 3.89
SCN1B-201ENST00000262631 CEP162Q5TB80 1403 aa39.28■■■■□ 3.88
SCN1B-201ENST00000262631 PRG4Q92954 1404 aaPredicted RBP39.25■■■■□ 3.87
SCN1B-201ENST00000262631 DISP1Q96F81 1524 aa39.22■■■■□ 3.87
SCN1B-201ENST00000262631 CLIP1P30622 1438 aa39.22■■■■□ 3.87
SCN1B-201ENST00000262631 DNAJC5Q9H3Z4 198 aa39.21■■■■□ 3.87
SCN1B-201ENST00000262631 ERCC6L2Q5T890 1561 aa39.19■■■■□ 3.86
SCN1B-201ENST00000262631 ARHGAP35Q9NRY4 1499 aa39.18■■■■□ 3.86
SCN1B-201ENST00000262631 SAMD9Q5K651 1589 aa39.17■■■■□ 3.86
SCN1B-201ENST00000262631 P3H3Q8IVL6 736 aa39.16■■■■□ 3.86
SCN1B-201ENST00000262631 KIAA0556O60303 1618 aa39.13■■■■□ 3.85
SCN1B-201ENST00000262631 EFCAB5A4FU69 1503 aa39.12■■■■□ 3.85
SCN1B-201ENST00000262631 CARMIL2Q6F5E8 1435 aa39.11■■■■□ 3.85
SCN1B-201ENST00000262631 FHOD3Q2V2M9 1422 aa39.06■■■■□ 3.84
SCN1B-201ENST00000262631 ARHGEF11O15085 1522 aa39.03■■■■□ 3.84
SCN1B-201ENST00000262631 ARAP1Q96P48 1450 aa39.02■■■■□ 3.84
SCN1B-201ENST00000262631 TTBK1Q5TCY1 1321 aaPredicted RBP38.97■■■■□ 3.83
SCN1B-201ENST00000262631 RIMBP3CA6NJZ7 1639 aa38.92■■■■□ 3.82
SCN1B-201ENST00000262631 RIMBP3BA6NNM3 1639 aa38.92■■■■□ 3.82
SCN1B-201ENST00000262631 RIMBP3Q9UFD9 1639 aa38.92■■■■□ 3.82
SCN1B-201ENST00000262631 PTPRGP23470 1445 aa38.88■■■■□ 3.81
SCN1B-201ENST00000262631 FMN1Q68DA7 1419 aa38.77■■■■□ 3.8
SCN1B-201ENST00000262631 PLB1Q6P1J6 1458 aa38.74■■■■□ 3.79
SCN1B-201ENST00000262631 VPS8Q8N3P4 1428 aa38.71■■■■□ 3.79
SCN1B-201ENST00000262631 CYB5RLQ6IPT4 315 aa38.68■■■■□ 3.78
SCN1B-201ENST00000262631 ABCA8O94911 1581 aa38.65■■■■□ 3.78
SCN1B-201ENST00000262631 UACAQ9BZF9 1416 aa38.64■■■■□ 3.78
SCN1B-201ENST00000262631 PCF11O94913 1555 aaKnown RBP38.62■■■■□ 3.77
SCN1B-201ENST00000262631 CASKIN1Q8WXD9 1431 aa38.6■■■■□ 3.77
SCN1B-201ENST00000262631 RAPGEF6Q8TEU7 1601 aa38.59■■■■□ 3.77
SCN1B-201ENST00000262631 ATP1B4Q9UN42 357 aaPredicted RBP38.56■■■■□ 3.76
SCN1B-201ENST00000262631 ABCC2Q92887 1545 aa38.54■■■■□ 3.76
SCN1B-201ENST00000262631 FYCO1Q9BQS8 1478 aa38.54■■■■□ 3.76
SCN1B-201ENST00000262631 NUP153P49790 1475 aaKnown RBP38.53■■■■□ 3.76
SCN1B-201ENST00000262631 ADCY10Q96PN6 1610 aa38.52■■■■□ 3.76
SCN1B-201ENST00000262631 UHRF1BP1LA0JNW5 1464 aa38.52■■■■□ 3.76
SCN1B-201ENST00000262631 ARID3CA6NKF2 412 aa38.51■■■■□ 3.76
SCN1B-201ENST00000262631 HECW1Q76N89 1606 aa38.47■■■■□ 3.75
SCN1B-201ENST00000262631 EPRSP07814 1512 aaKnown RBP38.39■■■■□ 3.74
SCN1B-201ENST00000262631 LRRIQ1Q96JM4 1722 aa38.39■■■■□ 3.74
SCN1B-201ENST00000262631 CDK13Q14004 1512 aaKnown RBP38.38■■■■□ 3.73
SCN1B-201ENST00000262631 ATP10BO94823 1461 aa38.38■■■■□ 3.73
SCN1B-201ENST00000262631 KDM5BQ9UGL1 1544 aa38.36■■■■□ 3.73
SCN1B-201ENST00000262631 CCDC18Q5T9S5 1454 aa38.3■■■■□ 3.72
SCN1B-201ENST00000262631 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.29■■■■□ 3.72
SCN1B-201ENST00000262631 HNRNPUL2Q1KMD3 747 aaKnown RBP38.29■■■■□ 3.72
SCN1B-201ENST00000262631 ZCCHC11Q5TAX3 1644 aaKnown RBP38.28■■■■□ 3.72
SCN1B-201ENST00000262631 NPM1P06748 294 aaKnown RBP eCLIP38.23■■■■□ 3.71
SCN1B-201ENST00000262631 TIAM1Q13009 1591 aa38.23■■■■□ 3.71
SCN1B-201ENST00000262631 APLP2Q06481 763 aa38.21■■■■□ 3.71
SCN1B-201ENST00000262631 MAP3K1Q13233 1512 aa38.19■■■■□ 3.7
SCN1B-201ENST00000262631 CFAP43Q8NDM7 1665 aa38.19■■■■□ 3.7
SCN1B-201ENST00000262631 KANK4Q5T7N3 995 aaPredicted RBP38.15■■■■□ 3.7
SCN1B-201ENST00000262631 MAGI3Q5TCQ9 1506 aa38.15■■■■□ 3.7
SCN1B-201ENST00000262631 ASXL2Q76L83 1435 aa38.11■■■■□ 3.69
SCN1B-201ENST00000262631 CDK11AQ9UQ88 783 aaPredicted RBP38.1■■■■□ 3.69
SCN1B-201ENST00000262631 PLEKHD1A6NEE1 506 aa38.09■■■■□ 3.69
SCN1B-201ENST00000262631 PPARGC1BQ86YN6 1023 aaKnown RBP38.07■■■■□ 3.69
SCN1B-201ENST00000262631 LRRC9Q6ZRR7 1453 aa38.07■■■■□ 3.69
SCN1B-201ENST00000262631 MTUS2Q5JR59 1369 aa38.05■■■■□ 3.68
SCN1B-201ENST00000262631 MAPKBP1O60336 1514 aa38.05■■■■□ 3.68
SCN1B-201ENST00000262631 WDR7Q9Y4E6 1490 aa38.03■■■■□ 3.68
SCN1B-201ENST00000262631 TROQ12816 1431 aaPredicted RBP38.02■■■■□ 3.68
SCN1B-201ENST00000262631 EHBP1L1Q8N3D4 1523 aa37.97■■■■□ 3.67
SCN1B-201ENST00000262631 KCNH8Q96L42 1107 aa37.96■■■■□ 3.67
SCN1B-201ENST00000262631 KIF14Q15058 1648 aa37.9■■■■□ 3.66
SCN1B-201ENST00000262631 NCOA2Q15596 1464 aa37.81■■■■□ 3.64
SCN1B-201ENST00000262631 SUPT6HQ7KZ85 1726 aaKnown RBP37.8■■■■□ 3.64
SCN1B-201ENST00000262631 ABCC10Q5T3U5 1492 aa37.79■■■■□ 3.64
SCN1B-201ENST00000262631 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.78■■■■□ 3.64
SCN1B-201ENST00000262631 DIP2BQ9P265 1576 aa37.75■■■■□ 3.63
SCN1B-201ENST00000262631 TTC37Q6PGP7 1564 aa37.75■■■■□ 3.63
SCN1B-201ENST00000262631 FAM69CQ0P6D2 419 aa37.72■■■■□ 3.63
SCN1B-201ENST00000262631 PHLDB1Q86UU1 1377 aa37.71■■■■□ 3.63
SCN1B-201ENST00000262631 ABCA9Q8IUA7 1624 aa37.69■■■■□ 3.62
SCN1B-201ENST00000262631 GLI2P10070 1586 aa37.67■■■■□ 3.62
SCN1B-201ENST00000262631 CCNB3Q8WWL7 1395 aa37.66■■■■□ 3.62
SCN1B-201ENST00000262631 GPATCH8Q9UKJ3 1502 aaKnown RBP37.64■■■■□ 3.62
SCN1B-201ENST00000262631 KIF13AQ9H1H9 1805 aa37.61■■■■□ 3.61
SCN1B-201ENST00000262631 CD109Q6YHK3 1445 aa37.59■■■■□ 3.61
SCN1B-201ENST00000262631 MYOM3Q5VTT5 1437 aa37.58■■■■□ 3.61
SCN1B-201ENST00000262631 MAP3K4Q9Y6R4 1608 aa37.57■■■■□ 3.6
SCN1B-201ENST00000262631 CDC42BPAQ5VT25 1732 aa37.57■■■■□ 3.6
SCN1B-201ENST00000262631 TRHP20396 242 aaPredicted RBP37.56■■■■□ 3.6
SCN1B-201ENST00000262631 PLCH2O75038 1416 aa37.55■■■■□ 3.6
SCN1B-201ENST00000262631 MYO5CQ9NQX4 1742 aa37.52■■■■□ 3.6
SCN1B-201ENST00000262631 PREX2Q70Z35 1606 aa37.52■■■■□ 3.6
SCN1B-201ENST00000262631 CFDP1Q9UEE9 299 aaPredicted RBP37.5■■■■□ 3.59
SCN1B-201ENST00000262631 CDC42BPBQ9Y5S2 1711 aa37.49■■■■□ 3.59
SCN1B-201ENST00000262631 ITSN2Q9NZM3 1697 aa37.48■■■■□ 3.59
SCN1B-201ENST00000262631 FGD6Q6ZV73 1430 aa37.47■■■■□ 3.59
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms