RNA–Protein interactions for RNA: ENST00000262631.10

SCN1B-201, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,670 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-201ENST00000262631 OSCARQ8IYS5 282 aa39.67■■■■□ 3.94
SCN1B-201ENST00000262631 KIAA0586Q9BVV6 1533 aa39.6■■■■□ 3.93
SCN1B-201ENST00000262631 CTTNBP2Q8WZ74 1663 aa39.56■■■■□ 3.92
SCN1B-201ENST00000262631 CLASP1Q7Z460 1538 aa39.55■■■■□ 3.92
SCN1B-201ENST00000262631 TNIKQ9UKE5 1360 aa39.55■■■■□ 3.92
SCN1B-201ENST00000262631 IQGAP2Q13576 1575 aa39.5■■■■□ 3.91
SCN1B-201ENST00000262631 RANGAP1P46060 587 aaPredicted RBP39.43■■■■□ 3.9
SCN1B-201ENST00000262631 JPH4Q96JJ6 628 aa39.41■■■■□ 3.9
SCN1B-201ENST00000262631 UGGT2Q9NYU1 1516 aa39.32■■■■□ 3.89
SCN1B-201ENST00000262631 SHROOM2Q13796 1616 aa39.32■■■■□ 3.89
SCN1B-201ENST00000262631 CEP162Q5TB80 1403 aa39.28■■■■□ 3.88
SCN1B-201ENST00000262631 PRG4Q92954 1404 aaPredicted RBP39.25■■■■□ 3.87
SCN1B-201ENST00000262631 DISP1Q96F81 1524 aa39.22■■■■□ 3.87
SCN1B-201ENST00000262631 CLIP1P30622 1438 aa39.22■■■■□ 3.87
SCN1B-201ENST00000262631 DNAJC5Q9H3Z4 198 aa39.21■■■■□ 3.87
SCN1B-201ENST00000262631 ERCC6L2Q5T890 1561 aa39.19■■■■□ 3.86
SCN1B-201ENST00000262631 ARHGAP35Q9NRY4 1499 aa39.18■■■■□ 3.86
SCN1B-201ENST00000262631 SAMD9Q5K651 1589 aa39.17■■■■□ 3.86
SCN1B-201ENST00000262631 P3H3Q8IVL6 736 aa39.16■■■■□ 3.86
SCN1B-201ENST00000262631 KIAA0556O60303 1618 aa39.13■■■■□ 3.85
SCN1B-201ENST00000262631 EFCAB5A4FU69 1503 aa39.12■■■■□ 3.85
SCN1B-201ENST00000262631 CARMIL2Q6F5E8 1435 aa39.11■■■■□ 3.85
SCN1B-201ENST00000262631 FHOD3Q2V2M9 1422 aa39.06■■■■□ 3.84
SCN1B-201ENST00000262631 ARHGEF11O15085 1522 aa39.03■■■■□ 3.84
SCN1B-201ENST00000262631 ARAP1Q96P48 1450 aa39.02■■■■□ 3.84
SCN1B-201ENST00000262631 TTBK1Q5TCY1 1321 aaPredicted RBP38.97■■■■□ 3.83
SCN1B-201ENST00000262631 RIMBP3CA6NJZ7 1639 aa38.92■■■■□ 3.82
SCN1B-201ENST00000262631 RIMBP3BA6NNM3 1639 aa38.92■■■■□ 3.82
SCN1B-201ENST00000262631 RIMBP3Q9UFD9 1639 aa38.92■■■■□ 3.82
SCN1B-201ENST00000262631 PTPRGP23470 1445 aa38.88■■■■□ 3.81
SCN1B-201ENST00000262631 FMN1Q68DA7 1419 aa38.77■■■■□ 3.8
SCN1B-201ENST00000262631 PLB1Q6P1J6 1458 aa38.74■■■■□ 3.79
SCN1B-201ENST00000262631 VPS8Q8N3P4 1428 aa38.71■■■■□ 3.79
SCN1B-201ENST00000262631 CYB5RLQ6IPT4 315 aa38.68■■■■□ 3.78
SCN1B-201ENST00000262631 ABCA8O94911 1581 aa38.65■■■■□ 3.78
SCN1B-201ENST00000262631 UACAQ9BZF9 1416 aa38.64■■■■□ 3.78
SCN1B-201ENST00000262631 PCF11O94913 1555 aaKnown RBP38.62■■■■□ 3.77
SCN1B-201ENST00000262631 CASKIN1Q8WXD9 1431 aa38.6■■■■□ 3.77
SCN1B-201ENST00000262631 RAPGEF6Q8TEU7 1601 aa38.59■■■■□ 3.77
SCN1B-201ENST00000262631 ATP1B4Q9UN42 357 aaPredicted RBP38.56■■■■□ 3.76
SCN1B-201ENST00000262631 ABCC2Q92887 1545 aa38.54■■■■□ 3.76
SCN1B-201ENST00000262631 FYCO1Q9BQS8 1478 aa38.54■■■■□ 3.76
SCN1B-201ENST00000262631 NUP153P49790 1475 aaKnown RBP38.53■■■■□ 3.76
SCN1B-201ENST00000262631 ADCY10Q96PN6 1610 aa38.52■■■■□ 3.76
SCN1B-201ENST00000262631 UHRF1BP1LA0JNW5 1464 aa38.52■■■■□ 3.76
SCN1B-201ENST00000262631 ARID3CA6NKF2 412 aa38.51■■■■□ 3.76
SCN1B-201ENST00000262631 HECW1Q76N89 1606 aa38.47■■■■□ 3.75
SCN1B-201ENST00000262631 EPRSP07814 1512 aaKnown RBP38.39■■■■□ 3.74
SCN1B-201ENST00000262631 LRRIQ1Q96JM4 1722 aa38.39■■■■□ 3.74
SCN1B-201ENST00000262631 CDK13Q14004 1512 aaKnown RBP38.38■■■■□ 3.73
SCN1B-201ENST00000262631 ATP10BO94823 1461 aa38.38■■■■□ 3.73
SCN1B-201ENST00000262631 KDM5BQ9UGL1 1544 aa38.36■■■■□ 3.73
SCN1B-201ENST00000262631 CCDC18Q5T9S5 1454 aa38.3■■■■□ 3.72
SCN1B-201ENST00000262631 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.29■■■■□ 3.72
SCN1B-201ENST00000262631 HNRNPUL2Q1KMD3 747 aaKnown RBP38.29■■■■□ 3.72
SCN1B-201ENST00000262631 ZCCHC11Q5TAX3 1644 aaKnown RBP38.28■■■■□ 3.72
SCN1B-201ENST00000262631 NPM1P06748 294 aaKnown RBP eCLIP38.23■■■■□ 3.71
SCN1B-201ENST00000262631 TIAM1Q13009 1591 aa38.23■■■■□ 3.71
SCN1B-201ENST00000262631 APLP2Q06481 763 aa38.21■■■■□ 3.71
SCN1B-201ENST00000262631 MAP3K1Q13233 1512 aa38.19■■■■□ 3.7
SCN1B-201ENST00000262631 CFAP43Q8NDM7 1665 aa38.19■■■■□ 3.7
SCN1B-201ENST00000262631 KANK4Q5T7N3 995 aaPredicted RBP38.15■■■■□ 3.7
SCN1B-201ENST00000262631 MAGI3Q5TCQ9 1506 aa38.15■■■■□ 3.7
SCN1B-201ENST00000262631 ASXL2Q76L83 1435 aa38.11■■■■□ 3.69
SCN1B-201ENST00000262631 CDK11AQ9UQ88 783 aaPredicted RBP38.1■■■■□ 3.69
SCN1B-201ENST00000262631 PLEKHD1A6NEE1 506 aa38.09■■■■□ 3.69
SCN1B-201ENST00000262631 PPARGC1BQ86YN6 1023 aaKnown RBP38.07■■■■□ 3.69
SCN1B-201ENST00000262631 LRRC9Q6ZRR7 1453 aa38.07■■■■□ 3.69
SCN1B-201ENST00000262631 MTUS2Q5JR59 1369 aa38.05■■■■□ 3.68
SCN1B-201ENST00000262631 MAPKBP1O60336 1514 aa38.05■■■■□ 3.68
SCN1B-201ENST00000262631 WDR7Q9Y4E6 1490 aa38.03■■■■□ 3.68
SCN1B-201ENST00000262631 TROQ12816 1431 aaPredicted RBP38.02■■■■□ 3.68
SCN1B-201ENST00000262631 EHBP1L1Q8N3D4 1523 aa37.97■■■■□ 3.67
SCN1B-201ENST00000262631 KCNH8Q96L42 1107 aa37.96■■■■□ 3.67
SCN1B-201ENST00000262631 KIF14Q15058 1648 aa37.9■■■■□ 3.66
SCN1B-201ENST00000262631 NCOA2Q15596 1464 aa37.81■■■■□ 3.64
SCN1B-201ENST00000262631 SUPT6HQ7KZ85 1726 aaKnown RBP37.8■■■■□ 3.64
SCN1B-201ENST00000262631 ABCC10Q5T3U5 1492 aa37.79■■■■□ 3.64
SCN1B-201ENST00000262631 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.78■■■■□ 3.64
SCN1B-201ENST00000262631 DIP2BQ9P265 1576 aa37.75■■■■□ 3.63
SCN1B-201ENST00000262631 TTC37Q6PGP7 1564 aa37.75■■■■□ 3.63
SCN1B-201ENST00000262631 FAM69CQ0P6D2 419 aa37.72■■■■□ 3.63
SCN1B-201ENST00000262631 PHLDB1Q86UU1 1377 aa37.71■■■■□ 3.63
SCN1B-201ENST00000262631 ABCA9Q8IUA7 1624 aa37.69■■■■□ 3.62
SCN1B-201ENST00000262631 GLI2P10070 1586 aa37.67■■■■□ 3.62
SCN1B-201ENST00000262631 CCNB3Q8WWL7 1395 aa37.66■■■■□ 3.62
SCN1B-201ENST00000262631 GPATCH8Q9UKJ3 1502 aaKnown RBP37.64■■■■□ 3.62
SCN1B-201ENST00000262631 KIF13AQ9H1H9 1805 aa37.61■■■■□ 3.61
SCN1B-201ENST00000262631 CD109Q6YHK3 1445 aa37.59■■■■□ 3.61
SCN1B-201ENST00000262631 MYOM3Q5VTT5 1437 aa37.58■■■■□ 3.61
SCN1B-201ENST00000262631 MAP3K4Q9Y6R4 1608 aa37.57■■■■□ 3.6
SCN1B-201ENST00000262631 CDC42BPAQ5VT25 1732 aa37.57■■■■□ 3.6
SCN1B-201ENST00000262631 TRHP20396 242 aaPredicted RBP37.56■■■■□ 3.6
SCN1B-201ENST00000262631 PLCH2O75038 1416 aa37.55■■■■□ 3.6
SCN1B-201ENST00000262631 MYO5CQ9NQX4 1742 aa37.52■■■■□ 3.6
SCN1B-201ENST00000262631 PREX2Q70Z35 1606 aa37.52■■■■□ 3.6
SCN1B-201ENST00000262631 CFDP1Q9UEE9 299 aaPredicted RBP37.5■■■■□ 3.59
SCN1B-201ENST00000262631 CDC42BPBQ9Y5S2 1711 aa37.49■■■■□ 3.59
SCN1B-201ENST00000262631 ITSN2Q9NZM3 1697 aa37.48■■■■□ 3.59
SCN1B-201ENST00000262631 FGD6Q6ZV73 1430 aa37.47■■■■□ 3.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms