RNA–Protein interactions for RNA: ENST00000262613.9

SLC9A3R1-201, Transcript of SLC9A3 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC9A3R1, Length 1,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R1-201ENST00000262613 MAGI1Q96QZ7 1491 aaPredicted RBP32.82■■■□□ 2.84
SLC9A3R1-201ENST00000262613 RANGAP1P46060 587 aaPredicted RBP32.76■■■□□ 2.84
SLC9A3R1-201ENST00000262613 SYNJ2O15056 1496 aa32.68■■■□□ 2.82
SLC9A3R1-201ENST00000262613 ARHGAP35Q9NRY4 1499 aa32.68■■■□□ 2.82
SLC9A3R1-201ENST00000262613 GRIN2AQ12879 1464 aa32.67■■■□□ 2.82
SLC9A3R1-201ENST00000262613 ARAP1Q96P48 1450 aa32.67■■■□□ 2.82
SLC9A3R1-201ENST00000262613 VPS8Q8N3P4 1428 aa32.62■■■□□ 2.81
SLC9A3R1-201ENST00000262613 CHMP7Q8WUX9 453 aaPredicted RBP32.56■■■□□ 2.8
SLC9A3R1-201ENST00000262613 EFCAB5A4FU69 1503 aa32.55■■■□□ 2.8
SLC9A3R1-201ENST00000262613 IQGAP2Q13576 1575 aa32.54■■■□□ 2.8
SLC9A3R1-201ENST00000262613 CEP170Q5SW79 1584 aa32.49■■■□□ 2.79
SLC9A3R1-201ENST00000262613 ZEB1P37275 1124 aaPredicted RBP32.49■■■□□ 2.79
SLC9A3R1-201ENST00000262613 SAMD9Q5K651 1589 aa32.49■■■□□ 2.79
SLC9A3R1-201ENST00000262613 KIAA0586Q9BVV6 1533 aa32.48■■■□□ 2.79
SLC9A3R1-201ENST00000262613 FBLN2P98095 1184 aa32.46■■■□□ 2.79
SLC9A3R1-201ENST00000262613 NUP160Q12769 1436 aa32.46■■■□□ 2.79
SLC9A3R1-201ENST00000262613 CHD1O14646 1710 aa32.41■■■□□ 2.78
SLC9A3R1-201ENST00000262613 UGGT2Q9NYU1 1516 aa32.39■■■□□ 2.78
SLC9A3R1-201ENST00000262613 FHOD3Q2V2M9 1422 aa32.39■■■□□ 2.78
SLC9A3R1-201ENST00000262613 P3H3Q8IVL6 736 aa32.36■■■□□ 2.77
SLC9A3R1-201ENST00000262613 PCF11O94913 1555 aaKnown RBP32.23■■■□□ 2.75
SLC9A3R1-201ENST00000262613 DISP1Q96F81 1524 aa32.23■■■□□ 2.75
SLC9A3R1-201ENST00000262613 FMN1Q68DA7 1419 aa32.23■■■□□ 2.75
SLC9A3R1-201ENST00000262613 KIAA0556O60303 1618 aa32.23■■■□□ 2.75
SLC9A3R1-201ENST00000262613 APLP2Q06481 763 aa32.19■■■□□ 2.74
SLC9A3R1-201ENST00000262613 CASKIN1Q8WXD9 1431 aa32.16■■■□□ 2.74
SLC9A3R1-201ENST00000262613 FYCO1Q9BQS8 1478 aa32.16■■■□□ 2.74
SLC9A3R1-201ENST00000262613 JPH4Q96JJ6 628 aa32.14■■■□□ 2.74
SLC9A3R1-201ENST00000262613 MAP3K1Q13233 1512 aa32.1■■■□□ 2.73
SLC9A3R1-201ENST00000262613 TIAM1Q13009 1591 aa32.07■■■□□ 2.72
SLC9A3R1-201ENST00000262613 TTBK1Q5TCY1 1321 aaPredicted RBP32.06■■■□□ 2.72
SLC9A3R1-201ENST00000262613 SHROOM2Q13796 1616 aa32.06■■■□□ 2.72
SLC9A3R1-201ENST00000262613 CARMIL2Q6F5E8 1435 aa32.05■■■□□ 2.72
SLC9A3R1-201ENST00000262613 CLASP1Q7Z460 1538 aa32.05■■■□□ 2.72
SLC9A3R1-201ENST00000262613 CFAP43Q8NDM7 1665 aa32.04■■■□□ 2.72
SLC9A3R1-201ENST00000262613 KANK4Q5T7N3 995 aaPredicted RBP31.99■■■□□ 2.71
SLC9A3R1-201ENST00000262613 LRRIQ1Q96JM4 1722 aa31.97■■■□□ 2.71
SLC9A3R1-201ENST00000262613 PRG4Q92954 1404 aaPredicted RBP31.97■■■□□ 2.71
SLC9A3R1-201ENST00000262613 ATP1B4Q9UN42 357 aaPredicted RBP31.96■■■□□ 2.71
SLC9A3R1-201ENST00000262613 HECW1Q76N89 1606 aa31.95■■■□□ 2.7
SLC9A3R1-201ENST00000262613 LRRC9Q6ZRR7 1453 aa31.91■■■□□ 2.7
SLC9A3R1-201ENST00000262613 RAPGEF6Q8TEU7 1601 aa31.88■■■□□ 2.69
SLC9A3R1-201ENST00000262613 CCDC18Q5T9S5 1454 aa31.85■■■□□ 2.69
SLC9A3R1-201ENST00000262613 ERCC6L2Q5T890 1561 aa31.82■■■□□ 2.68
SLC9A3R1-201ENST00000262613 EPRSP07814 1512 aaKnown RBP31.81■■■□□ 2.68
SLC9A3R1-201ENST00000262613 PLB1Q6P1J6 1458 aa31.8■■■□□ 2.68
SLC9A3R1-201ENST00000262613 NUP153P49790 1475 aaKnown RBP31.79■■■□□ 2.68
SLC9A3R1-201ENST00000262613 ABCA8O94911 1581 aa31.77■■■□□ 2.68
SLC9A3R1-201ENST00000262613 CDK13Q14004 1512 aaKnown RBP31.75■■■□□ 2.67
SLC9A3R1-201ENST00000262613 PTPRGP23470 1445 aa31.75■■■□□ 2.67
SLC9A3R1-201ENST00000262613 OSCARQ8IYS5 282 aa31.73■■■□□ 2.67
SLC9A3R1-201ENST00000262613 MAGI3Q5TCQ9 1506 aa31.69■■■□□ 2.66
SLC9A3R1-201ENST00000262613 EHBP1L1Q8N3D4 1523 aa31.69■■■□□ 2.66
SLC9A3R1-201ENST00000262613 MTUS2Q5JR59 1369 aa31.68■■■□□ 2.66
SLC9A3R1-201ENST00000262613 ARID3CA6NKF2 412 aa31.63■■■□□ 2.65
SLC9A3R1-201ENST00000262613 RRBP1Q9P2E9 1410 aaKnown RBP31.62■■■□□ 2.65
SLC9A3R1-201ENST00000262613 PHLDB1Q86UU1 1377 aa31.61■■■□□ 2.65
SLC9A3R1-201ENST00000262613 SUPT6HQ7KZ85 1726 aaKnown RBP31.59■■■□□ 2.65
SLC9A3R1-201ENST00000262613 UACAQ9BZF9 1416 aa31.58■■■□□ 2.65
SLC9A3R1-201ENST00000262613 NCOA2Q15596 1464 aa31.54■■■□□ 2.64
SLC9A3R1-201ENST00000262613 ARHGEF11O15085 1522 aa31.54■■■□□ 2.64
SLC9A3R1-201ENST00000262613 ATP10BO94823 1461 aa31.53■■■□□ 2.64
SLC9A3R1-201ENST00000262613 ABCC2Q92887 1545 aa31.52■■■□□ 2.64
SLC9A3R1-201ENST00000262613 CCNB3Q8WWL7 1395 aa31.51■■■□□ 2.63
SLC9A3R1-201ENST00000262613 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.48■■■□□ 2.63
SLC9A3R1-201ENST00000262613 HNRNPUL2Q1KMD3 747 aaKnown RBP31.48■■■□□ 2.63
SLC9A3R1-201ENST00000262613 CDK11AQ9UQ88 783 aaPredicted RBP31.48■■■□□ 2.63
SLC9A3R1-201ENST00000262613 UHRF1BP1LA0JNW5 1464 aa31.46■■■□□ 2.63
SLC9A3R1-201ENST00000262613 TROQ12816 1431 aaPredicted RBP31.45■■■□□ 2.63
SLC9A3R1-201ENST00000262613 SCAF1Q9H7N4 1312 aaKnown RBP31.43■■■□□ 2.62
SLC9A3R1-201ENST00000262613 MYOM3Q5VTT5 1437 aa31.4■■■□□ 2.62
SLC9A3R1-201ENST00000262613 ADCY10Q96PN6 1610 aa31.4■■■□□ 2.62
SLC9A3R1-201ENST00000262613 FGD6Q6ZV73 1430 aa31.39■■■□□ 2.62
SLC9A3R1-201ENST00000262613 CCER1Q8TC90 406 aaPredicted RBP31.39■■■□□ 2.62
SLC9A3R1-201ENST00000262613 PELP1Q8IZL8 1130 aaKnown RBP31.37■■■□□ 2.61
SLC9A3R1-201ENST00000262613 KIF14Q15058 1648 aa31.33■■■□□ 2.61
SLC9A3R1-201ENST00000262613 KDM5BQ9UGL1 1544 aa31.33■■■□□ 2.61
SLC9A3R1-201ENST00000262613 PLEKHD1A6NEE1 506 aa31.32■■■□□ 2.6
SLC9A3R1-201ENST00000262613 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.32■■■□□ 2.6
SLC9A3R1-201ENST00000262613 ZCCHC11Q5TAX3 1644 aaKnown RBP31.31■■■□□ 2.6
SLC9A3R1-201ENST00000262613 PTPN23Q9H3S7 1636 aa31.26■■■□□ 2.6
SLC9A3R1-201ENST00000262613 FAM50AQ14320 339 aaKnown RBP31.25■■■□□ 2.59
SLC9A3R1-201ENST00000262613 MIA2Q96PC5 1412 aa31.24■■■□□ 2.59
SLC9A3R1-201ENST00000262613 TCOF1Q13428 1488 aaKnown RBP31.22■■■□□ 2.59
SLC9A3R1-201ENST00000262613 ABCC10Q5T3U5 1492 aa31.21■■■□□ 2.59
SLC9A3R1-201ENST00000262613 ITSN2Q9NZM3 1697 aa31.19■■■□□ 2.58
SLC9A3R1-201ENST00000262613 GPATCH8Q9UKJ3 1502 aaKnown RBP31.17■■■□□ 2.58
SLC9A3R1-201ENST00000262613 ITGAEP38570 1179 aa31.15■■■□□ 2.58
SLC9A3R1-201ENST00000262613 CDC42BPAQ5VT25 1732 aa31.13■■■□□ 2.57
SLC9A3R1-201ENST00000262613 RIMBP3CA6NJZ7 1639 aa31.13■■■□□ 2.57
SLC9A3R1-201ENST00000262613 RIMBP3BA6NNM3 1639 aa31.13■■■□□ 2.57
SLC9A3R1-201ENST00000262613 RIMBP3Q9UFD9 1639 aa31.13■■■□□ 2.57
SLC9A3R1-201ENST00000262613 ACIN1Q9UKV3 1341 aaKnown RBP31.07■■■□□ 2.56
SLC9A3R1-201ENST00000262613 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.07■■■□□ 2.562e-7■■■■■ 47.7
SLC9A3R1-201ENST00000262613 TTC37Q6PGP7 1564 aa31.06■■■□□ 2.56
SLC9A3R1-201ENST00000262613 PTPRKQ15262 1439 aa31.04■■■□□ 2.56
SLC9A3R1-201ENST00000262613 CFDP1Q9UEE9 299 aaPredicted RBP31.03■■■□□ 2.56
SLC9A3R1-201ENST00000262613 WDR7Q9Y4E6 1490 aa31.03■■■□□ 2.56
SLC9A3R1-201ENST00000262613 DIEXFQ68CQ4 756 aaKnown RBP31.02■■■□□ 2.56
SLC9A3R1-201ENST00000262613 PREX2Q70Z35 1606 aa31.02■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms