RNA–Protein interactions for RNA: ENST00000261798.9

CSNK1A1-201, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 6,067 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-201ENST00000261798 BECN1Q14457 450 aa14.37□□□□□ -0.11
CSNK1A1-201ENST00000261798 DEKP35659 375 aaKnown RBP14.35□□□□□ -0.11
CSNK1A1-201ENST00000261798 WDR43Q15061 677 aaKnown RBP eCLIP14.34□□□□□ -0.11
CSNK1A1-201ENST00000261798 CHIC2Q9UKJ5 165 aa14.34□□□□□ -0.11
CSNK1A1-201ENST00000261798 RSF1Q96T23 1441 aaPredicted RBP14.33□□□□□ -0.11
CSNK1A1-201ENST00000261798 TSHZ2Q9NRE2 1034 aa14.33□□□□□ -0.12
CSNK1A1-201ENST00000261798 TRIM44Q96DX7 344 aaPredicted RBP14.32□□□□□ -0.12
CSNK1A1-201ENST00000261798 RTN4Q9NQC3 1192 aaKnown RBP14.32□□□□□ -0.12
CSNK1A1-201ENST00000261798 MTUS2Q5JR59 1369 aa14.29□□□□□ -0.12
CSNK1A1-201ENST00000261798 RB1CC1Q8TDY2 1594 aa14.29□□□□□ -0.12
CSNK1A1-201ENST00000261798 LAS1LQ9Y4W2 734 aaKnown RBP14.29□□□□□ -0.12
CSNK1A1-201ENST00000261798 CCER2I3L3R5 266 aa14.29□□□□□ -0.12
CSNK1A1-201ENST00000261798 B4GALNT3Q6L9W6 998 aa14.27□□□□□ -0.12
CSNK1A1-201ENST00000261798 TIMELESSQ9UNS1 1208 aa14.24□□□□□ -0.13
CSNK1A1-201ENST00000261798 SLC24A1O60721 1099 aa14.23□□□□□ -0.13
CSNK1A1-201ENST00000261798 KDM2AQ9Y2K7 1162 aa14.22□□□□□ -0.13
CSNK1A1-201ENST00000261798 GOLGA6L22H0YM25 854 aa14.21□□□□□ -0.13
CSNK1A1-201ENST00000261798 SIN3AQ96ST3 1273 aa14.21□□□□□ -0.13
CSNK1A1-201ENST00000261798 CEP164Q9UPV0 1460 aa14.21□□□□□ -0.13
CSNK1A1-201ENST00000261798 NAP1L5Q96NT1 182 aaPredicted RBP14.2□□□□□ -0.14
CSNK1A1-201ENST00000261798 RRP7BPQ9NSQ0 103 aa14.19□□□□□ -0.14
CSNK1A1-201ENST00000261798 NPM1P06748 294 aaKnown RBP eCLIP14.19□□□□□ -0.14
CSNK1A1-201ENST00000261798 TNNT2P45379 298 aaPredicted RBP14.18□□□□□ -0.14
CSNK1A1-201ENST00000261798 WRNQ14191 1432 aaPredicted RBP eCLIP14.15□□□□□ -0.14
CSNK1A1-201ENST00000261798 TSPY4P0CV99 314 aa14.15□□□□□ -0.14
CSNK1A1-201ENST00000261798 TSPY10P0CW01 314 aa14.15□□□□□ -0.14
CSNK1A1-201ENST00000261798 ESF1Q9H501 851 aaKnown RBP14.15□□□□□ -0.14
CSNK1A1-201ENST00000261798 SENP3-EIF4A1A0A087X0R7 540 aa14.14□□□□□ -0.15
CSNK1A1-201ENST00000261798 CCNB3Q8WWL7 1395 aa14.14□□□□□ -0.15
CSNK1A1-201ENST00000261798 MYH16Q9H6N6 1097 aa14.12□□□□□ -0.15
CSNK1A1-201ENST00000261798 RGS3P49796 1198 aa14.11□□□□□ -0.15
CSNK1A1-201ENST00000261798 NACADO15069 1562 aa14.1□□□□□ -0.15
CSNK1A1-201ENST00000261798 NCLP19338 710 aaKnown RBP14.1□□□□□ -0.15
CSNK1A1-201ENST00000261798 L1TD1Q5T7N2 865 aaKnown RBP14.09□□□□□ -0.15
CSNK1A1-201ENST00000261798 CHGAP10645 457 aaKnown RBP14.08□□□□□ -0.15
CSNK1A1-201ENST00000261798 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.08□□□□□ -0.151e-7■■□□□ 14.4
CSNK1A1-201ENST00000261798 PTMAP06454 111 aaKnown RBP14.07□□□□□ -0.16
CSNK1A1-201ENST00000261798 CARD11Q9BXL7 1154 aa14.06□□□□□ -0.16
CSNK1A1-201ENST00000261798 IPO9Q96P70 1041 aaKnown RBP14.04□□□□□ -0.16
CSNK1A1-201ENST00000261798 DNTTIP2Q5QJE6 756 aaKnown RBP14.04□□□□□ -0.16
CSNK1A1-201ENST00000261798 VPS8Q8N3P4 1428 aa14.04□□□□□ -0.16
CSNK1A1-201ENST00000261798 KNSTRNQ9Y448 316 aa14.04□□□□□ -0.16
CSNK1A1-201ENST00000261798 TCERG1O14776 1098 aaKnown RBP14.03□□□□□ -0.16
CSNK1A1-201ENST00000261798 CDCA8Q53HL2 280 aa14.03□□□□□ -0.16
CSNK1A1-201ENST00000261798 KIF27Q86VH2 1401 aa14.01□□□□□ -0.17
CSNK1A1-201ENST00000261798 SETD5Q9C0A6 1442 aa14.01□□□□□ -0.17
CSNK1A1-201ENST00000261798 CHMP7Q8WUX9 453 aaPredicted RBP14□□□□□ -0.17
CSNK1A1-201ENST00000261798 FTSJ3Q8IY81 847 aaKnown RBP13.99□□□□□ -0.17
CSNK1A1-201ENST00000261798 SOGA1O94964 1423 aa13.99□□□□□ -0.17
CSNK1A1-201ENST00000261798 HSPA5P11021 654 aaKnown RBP13.98□□□□□ -0.17
CSNK1A1-201ENST00000261798 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.98□□□□□ -0.17
CSNK1A1-201ENST00000261798 CFAP53Q96M91 514 aa13.97□□□□□ -0.17
CSNK1A1-201ENST00000261798 STAG3Q9UJ98 1225 aa13.97□□□□□ -0.17
CSNK1A1-201ENST00000261798 FANCIQ9NVI1 1328 aa13.97□□□□□ -0.17
CSNK1A1-201ENST00000261798 RGL3Q3MIN7 710 aa13.97□□□□□ -0.17
CSNK1A1-201ENST00000261798 USP35Q9P2H5 1018 aa13.96□□□□□ -0.17
CSNK1A1-201ENST00000261798 PNNQ9H307 717 aaKnown RBP13.96□□□□□ -0.17
CSNK1A1-201ENST00000261798 HSP90AB1P08238 724 aaKnown RBP13.95□□□□□ -0.18
CSNK1A1-201ENST00000261798 FRAT1Q92837 279 aaPredicted RBP13.94□□□□□ -0.18
CSNK1A1-201ENST00000261798 PPP1R15AO75807 674 aaPredicted RBP13.94□□□□□ -0.18
CSNK1A1-201ENST00000261798 CASC1Q6TDU7 716 aa13.94□□□□□ -0.18
CSNK1A1-201ENST00000261798 MS4A1P11836 297 aa13.93□□□□□ -0.18
CSNK1A1-201ENST00000261798 HSCBQ8IWL3 235 aa13.93□□□□□ -0.18
CSNK1A1-201ENST00000261798 FHAD1B1AJZ9 1412 aa13.93□□□□□ -0.18
CSNK1A1-201ENST00000261798 MSNP26038 577 aaKnown RBP13.93□□□□□ -0.18
CSNK1A1-201ENST00000261798 RCAN3Q9UKA8 241 aa13.93□□□□□ -0.18
CSNK1A1-201ENST00000261798 RAB3GAP2Q9H2M9 1393 aa13.92□□□□□ -0.18
CSNK1A1-201ENST00000261798 NUDCQ9Y266 331 aa13.91□□□□□ -0.18
CSNK1A1-201ENST00000261798 BAZ1BQ9UIG0 1483 aaKnown RBP13.91□□□□□ -0.18
CSNK1A1-201ENST00000261798 NEUROD2Q15784 382 aa13.91□□□□□ -0.18
CSNK1A1-201ENST00000261798 KANK4Q5T7N3 995 aaPredicted RBP13.9□□□□□ -0.18
CSNK1A1-201ENST00000261798 CFDP1Q9UEE9 299 aaPredicted RBP13.9□□□□□ -0.18
CSNK1A1-201ENST00000261798 CC2D1BQ5T0F9 858 aaKnown RBP13.89□□□□□ -0.19
CSNK1A1-201ENST00000261798 CHMP4BQ9H444 224 aaKnown RBP13.89□□□□□ -0.19
CSNK1A1-201ENST00000261798 KCNH8Q96L42 1107 aa13.87□□□□□ -0.19
CSNK1A1-201ENST00000261798 CDK11BP21127 795 aaKnown RBP13.87□□□□□ -0.19
CSNK1A1-201ENST00000261798 ERCC6Q03468 1493 aa13.86□□□□□ -0.19
CSNK1A1-201ENST00000261798 PLEKHD1A6NEE1 506 aa13.85□□□□□ -0.19
CSNK1A1-201ENST00000261798 PLPPR3Q6T4P5 718 aa13.85□□□□□ -0.19
CSNK1A1-201ENST00000261798 PLCB2Q00722 1185 aa13.85□□□□□ -0.19
CSNK1A1-201ENST00000261798 RSPH6AQ9H0K4 717 aa13.85□□□□□ -0.19
CSNK1A1-201ENST00000261798 SLKQ9H2G2 1235 aaPredicted RBP13.85□□□□□ -0.19
CSNK1A1-201ENST00000261798 CHAF1AQ13111 956 aaPredicted RBP13.84□□□□□ -0.19
CSNK1A1-201ENST00000261798 ZRSR1Q15695 479 aaKnown RBP13.84□□□□□ -0.19
CSNK1A1-201ENST00000261798 DHX57Q6P158 1386 aaKnown RBP13.84□□□□□ -0.19
CSNK1A1-201ENST00000261798 PTMSP20962 102 aa13.84□□□□□ -0.19
CSNK1A1-201ENST00000261798 TMF1P82094 1093 aa13.84□□□□□ -0.19
CSNK1A1-201ENST00000261798 BAZ1AQ9NRL2 1556 aaPredicted RBP13.84□□□□□ -0.19
CSNK1A1-201ENST00000261798 MAPK8IP3Q9UPT6 1336 aa13.84□□□□□ -0.19
CSNK1A1-201ENST00000261798 GBP4Q96PP9 640 aa13.84□□□□□ -0.19
CSNK1A1-201ENST00000261798 GOLGA6L3A6NEY3 463 aa13.83□□□□□ -0.2
CSNK1A1-201ENST00000261798 RALBP1Q15311 655 aa13.83□□□□□ -0.2
CSNK1A1-201ENST00000261798 SPRYD3Q8NCJ5 442 aa13.83□□□□□ -0.2
CSNK1A1-201ENST00000261798 CECR2Q9BXF3 1484 aa13.82□□□□□ -0.2
CSNK1A1-201ENST00000261798 ARID4BQ4LE39 1312 aaPredicted RBP13.82□□□□□ -0.2
CSNK1A1-201ENST00000261798 KTN1Q86UP2 1357 aaKnown RBP13.82□□□□□ -0.2
CSNK1A1-201ENST00000261798 GZF1Q9H116 711 aaPredicted RBP13.82□□□□□ -0.2
CSNK1A1-201ENST00000261798 GSE1Q14687 1217 aa13.81□□□□□ -0.2
CSNK1A1-201ENST00000261798 CCDC88BA6NC98 1476 aa13.81□□□□□ -0.2
CSNK1A1-201ENST00000261798 PDE3BQ13370 1112 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms